Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Vmn2r5-201ENSMUST00000170270 2484 ntAPPRIS P2 TSL 5 BASIC6.79□□□□□ -1.32
Rfx1P48377 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Rfx1P48377 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Rfx1P48377 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Rfx1P48377 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Rfx1P48377 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC6.79□□□□□ -1.32
Rfx1P48377 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
Rfx1P48377 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Rfx1P48377 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Rfx1P48377 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC6.79□□□□□ -1.32
Rfx1P48377 Gm28432-201ENSMUST00000185237 1499 ntTSL 5 BASIC6.79□□□□□ -1.32
Rfx1P48377 Gm29662-201ENSMUST00000185620 1499 ntTSL 5 BASIC6.79□□□□□ -1.32
Rfx1P48377 Gm28082-201ENSMUST00000185683 1499 ntTSL 5 BASIC6.79□□□□□ -1.32
Rfx1P48377 Gm28679-201ENSMUST00000186013 1499 ntTSL 5 BASIC6.79□□□□□ -1.32
Rfx1P48377 Gm29565-202ENSMUST00000186260 1499 ntTSL 5 BASIC6.79□□□□□ -1.32
Rfx1P48377 Gm28338-202ENSMUST00000186269 1499 ntTSL 5 BASIC6.79□□□□□ -1.32
Rfx1P48377 Gm28668-202ENSMUST00000186549 1499 ntTSL 5 BASIC6.79□□□□□ -1.32
Rfx1P48377 Gm28135-201ENSMUST00000186847 1499 ntTSL 5 BASIC6.79□□□□□ -1.32
Rfx1P48377 Gm28291-202ENSMUST00000186921 1499 ntTSL 5 BASIC6.79□□□□□ -1.32
Rfx1P48377 Gm29393-201ENSMUST00000187002 1499 ntTSL 5 BASIC6.79□□□□□ -1.32
Rfx1P48377 Gm29219-201ENSMUST00000187224 1499 ntTSL 5 BASIC6.79□□□□□ -1.32
Rfx1P48377 Gm29547-201ENSMUST00000187258 1499 ntTSL 5 BASIC6.79□□□□□ -1.32
Rfx1P48377 Gm28260-201ENSMUST00000187337 1499 ntTSL 5 BASIC6.79□□□□□ -1.32
Rfx1P48377 Gm28225-201ENSMUST00000187730 1499 ntTSL 5 BASIC6.79□□□□□ -1.32
Rfx1P48377 Gm29569-202ENSMUST00000187955 1499 ntTSL 5 BASIC6.79□□□□□ -1.32
Rfx1P48377 Gm29625-201ENSMUST00000188079 1499 ntTSL 5 BASIC6.79□□□□□ -1.32
Rfx1P48377 Gm28735-202ENSMUST00000188159 1499 ntTSL 5 BASIC6.79□□□□□ -1.32
Rfx1P48377 Gm29297-202ENSMUST00000188186 1499 ntTSL 5 BASIC6.79□□□□□ -1.32
Rfx1P48377 Gm29457-201ENSMUST00000188224 1499 ntTSL 5 BASIC6.79□□□□□ -1.32
Rfx1P48377 Gm29190-201ENSMUST00000188255 1499 ntTSL 5 BASIC6.79□□□□□ -1.32
Rfx1P48377 Gm28236-203ENSMUST00000188311 1499 ntTSL 5 BASIC6.79□□□□□ -1.32
Rfx1P48377 Gm28197-203ENSMUST00000188434 1499 ntTSL 5 BASIC6.79□□□□□ -1.32
Rfx1P48377 Gm29070-202ENSMUST00000188541 1499 ntTSL 5 BASIC6.79□□□□□ -1.32
Rfx1P48377 Gm28545-201ENSMUST00000188667 1499 ntTSL 5 BASIC6.79□□□□□ -1.32
Rfx1P48377 Gm29265-201ENSMUST00000188697 1499 ntTSL 5 BASIC6.79□□□□□ -1.32
Rfx1P48377 Gm28947-203ENSMUST00000188701 1499 ntTSL 5 BASIC6.79□□□□□ -1.32
Rfx1P48377 Gm29616-201ENSMUST00000188777 1499 ntTSL 5 BASIC6.79□□□□□ -1.32
Rfx1P48377 Gm29162-202ENSMUST00000188893 1499 ntTSL 5 BASIC6.79□□□□□ -1.32
Rfx1P48377 Gm28606-201ENSMUST00000188938 1499 ntTSL 5 BASIC6.79□□□□□ -1.32
Rfx1P48377 Gm29338-201ENSMUST00000189318 1499 ntTSL 5 BASIC6.79□□□□□ -1.32
Rfx1P48377 Gm29425-202ENSMUST00000189421 1499 ntTSL 5 BASIC6.79□□□□□ -1.32
Rfx1P48377 Gm29271-203ENSMUST00000189943 1499 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Rfx1P48377 Gm28454-203ENSMUST00000190183 1495 ntTSL 5 BASIC6.79□□□□□ -1.32
Rfx1P48377 Gm28842-202ENSMUST00000190289 1499 ntTSL 5 BASIC6.79□□□□□ -1.32
Rfx1P48377 Gm28318-203ENSMUST00000190347 1499 ntTSL 5 BASIC6.79□□□□□ -1.32
Rfx1P48377 Gm28633-202ENSMUST00000190867 1485 ntTSL 5 BASIC6.79□□□□□ -1.32
Rfx1P48377 Gm29182-202ENSMUST00000191008 1499 ntTSL 5 BASIC6.79□□□□□ -1.32
Rfx1P48377 Gm28632-202ENSMUST00000191193 1499 ntTSL 5 BASIC6.79□□□□□ -1.32
Rfx1P48377 Gm28245-203ENSMUST00000191551 1495 ntTSL 5 BASIC6.79□□□□□ -1.32
Rfx1P48377 Gm38370-201ENSMUST00000192545 1499 ntTSL 5 BASIC6.79□□□□□ -1.32
Rfx1P48377 Gm37462-201ENSMUST00000193386 1498 ntTSL 5 BASIC6.79□□□□□ -1.32
Rfx1P48377 Gm32114-203ENSMUST00000195759 1499 ntTSL 5 BASIC6.79□□□□□ -1.32
Rfx1P48377 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Rfx1P48377 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Rfx1P48377 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Rfx1P48377 Fam107b-209ENSMUST00000226435 3602 ntBASIC6.78□□□□□ -1.32
Rfx1P48377 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Rfx1P48377 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Rfx1P48377 AC105407.2-201ENSMUST00000223707 3911 ntBASIC6.78□□□□□ -1.32
Rfx1P48377 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Rfx1P48377 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Rfx1P48377 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Rfx1P48377 Snora35-201ENSMUST00000104579 128 ntBASIC6.78□□□□□ -1.32
Rfx1P48377 Gm14358-201ENSMUST00000118458 403 ntBASIC6.78□□□□□ -1.32
Rfx1P48377 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC6.78□□□□□ -1.32
Rfx1P48377 Gm23465-201ENSMUST00000157134 262 ntBASIC6.78□□□□□ -1.32
Rfx1P48377 Gm17511-201ENSMUST00000172206 342 ntBASIC6.78□□□□□ -1.32
Rfx1P48377 Gm4134-201ENSMUST00000173244 563 ntBASIC6.78□□□□□ -1.32
Rfx1P48377 Mirt2-201ENSMUST00000175179 285 ntBASIC6.78□□□□□ -1.32
Rfx1P48377 Obox4-ps11-201ENSMUST00000176150 724 ntBASIC6.78□□□□□ -1.32
Rfx1P48377 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC6.78□□□□□ -1.32
Rfx1P48377 Gm37191-201ENSMUST00000193346 388 ntBASIC6.78□□□□□ -1.32
Rfx1P48377 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC6.78□□□□□ -1.32
Rfx1P48377 Gm4874-201ENSMUST00000203589 691 ntBASIC6.78□□□□□ -1.32
Rfx1P48377 Gm5735-201ENSMUST00000207053 167 ntBASIC6.78□□□□□ -1.32
Rfx1P48377 Gm44946-201ENSMUST00000208425 572 ntBASIC6.78□□□□□ -1.32
Rfx1P48377 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC6.78□□□□□ -1.32
Rfx1P48377 Gm7351-201ENSMUST00000210745 580 ntBASIC6.78□□□□□ -1.32
Rfx1P48377 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC6.78□□□□□ -1.32
Rfx1P48377 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Rfx1P48377 AC151904.3-201ENSMUST00000219266 895 ntBASIC6.78□□□□□ -1.32
Rfx1P48377 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC6.78□□□□□ -1.32
Rfx1P48377 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Rfx1P48377 mt-Td-201ENSMUST00000082404 70 ntBASIC6.78□□□□□ -1.32
Rfx1P48377 n-R5s88-201ENSMUST00000083173 118 ntBASIC6.78□□□□□ -1.32
Rfx1P48377 Gm23733-201ENSMUST00000083750 106 ntBASIC6.78□□□□□ -1.32
Rfx1P48377 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC6.78□□□□□ -1.32
Rfx1P48377 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Rfx1P48377 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC6.78□□□□□ -1.32
Rfx1P48377 Gm5512-201ENSMUST00000218013 1353 ntBASIC6.78□□□□□ -1.32
Rfx1P48377 Olfr753-ps1-203ENSMUST00000208970 2764 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Rfx1P48377 AC163660.3-201ENSMUST00000224253 1563 ntBASIC6.78□□□□□ -1.32
Rfx1P48377 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.32
Rfx1P48377 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC6.77□□□□□ -1.32
Rfx1P48377 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC6.77□□□□□ -1.32
Rfx1P48377 AC154323.3-201ENSMUST00000226927 1660 ntBASIC6.77□□□□□ -1.32
Rfx1P48377 Ptprd-201ENSMUST00000050757 4698 ntTSL 5 BASIC6.77□□□□□ -1.32
Rfx1P48377 Epyc-202ENSMUST00000105285 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Rfx1P48377 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Rfx1P48377 Gm11270-201ENSMUST00000117685 471 ntBASIC6.77□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms