Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 AC154329.1-201ENSMUST00000224408 3129 ntBASIC4.41□□□□□ -1.7
HttP42859 Pm20d1-202ENSMUST00000112393 6900 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HttP42859 Gm12289-201ENSMUST00000130860 2235 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HttP42859 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
HttP42859 Olfr981-202ENSMUST00000215956 8197 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
HttP42859 Mir680-3-201ENSMUST00000102298 87 ntBASIC4.41□□□□□ -1.7
HttP42859 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
HttP42859 Gm11432-201ENSMUST00000117334 231 ntBASIC4.41□□□□□ -1.7
HttP42859 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC4.41□□□□□ -1.7
HttP42859 Gm12082-201ENSMUST00000138164 600 ntTSL 3 BASIC4.41□□□□□ -1.7
HttP42859 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HttP42859 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC4.41□□□□□ -1.7
HttP42859 Gm20389-201ENSMUST00000174217 1006 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HttP42859 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HttP42859 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
HttP42859 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HttP42859 Olfr1126-201ENSMUST00000071355 945 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
HttP42859 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HttP42859 Gm37345-201ENSMUST00000193062 3138 ntBASIC4.41□□□□□ -1.7
HttP42859 Clasp1-201ENSMUST00000049404 7797 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
HttP42859 Gm37983-201ENSMUST00000193207 2006 ntBASIC4.41□□□□□ -1.7
HttP42859 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HttP42859 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HttP42859 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC4.41□□□□□ -1.7
HttP42859 Gm4736-201ENSMUST00000100870 380 ntBASIC4.41□□□□□ -1.7
HttP42859 Gm23697-201ENSMUST00000103897 110 ntBASIC4.41□□□□□ -1.7
HttP42859 Gm11403-201ENSMUST00000122195 369 ntBASIC4.41□□□□□ -1.7
HttP42859 Gm10059-201ENSMUST00000131139 171 ntBASIC4.41□□□□□ -1.7
HttP42859 Gm36776-201ENSMUST00000207006 203 ntBASIC4.41□□□□□ -1.7
HttP42859 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
HttP42859 Gm25480-201ENSMUST00000083217 133 ntBASIC4.41□□□□□ -1.7
HttP42859 Olfr1197-201ENSMUST00000099815 945 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
HttP42859 Stab2-201ENSMUST00000035288 8228 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HttP42859 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HttP42859 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
HttP42859 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HttP42859 Gm38057-201ENSMUST00000195551 3203 ntBASIC4.41□□□□□ -1.7
HttP42859 Sestd1-202ENSMUST00000102660 8990 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
HttP42859 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
HttP42859 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.7
HttP42859 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.7
HttP42859 Unc13b-216ENSMUST00000207708 6574 ntTSL 5 BASIC4.4□□□□□ -1.7
HttP42859 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
HttP42859 Pcdh15-216ENSMUST00000131724 6322 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
HttP42859 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
HttP42859 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC4.4□□□□□ -1.7
HttP42859 Vmn2r-ps134-201ENSMUST00000176907 1046 ntBASIC4.4□□□□□ -1.7
HttP42859 Gm44393-201ENSMUST00000197418 138 ntBASIC4.4□□□□□ -1.7
HttP42859 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
HttP42859 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
HttP42859 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
HttP42859 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HttP42859 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HttP42859 Gm8473-201ENSMUST00000176697 1885 ntBASIC4.4□□□□□ -1.71
HttP42859 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HttP42859 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
HttP42859 Gm7834-201ENSMUST00000117560 437 ntBASIC4.4□□□□□ -1.71
HttP42859 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HttP42859 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC4.4□□□□□ -1.71
HttP42859 Gm43093-201ENSMUST00000202439 1213 ntBASIC4.4□□□□□ -1.71
HttP42859 Gm6991-201ENSMUST00000218475 1178 ntBASIC4.4□□□□□ -1.71
HttP42859 Hecw2-203ENSMUST00000120904 11263 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
HttP42859 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
HttP42859 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HttP42859 Gm37562-201ENSMUST00000194763 4328 ntBASIC4.4□□□□□ -1.71
HttP42859 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
HttP42859 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC4.4□□□□□ -1.71
HttP42859 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
HttP42859 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HttP42859 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
HttP42859 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
HttP42859 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HttP42859 Gm14981-201ENSMUST00000117325 943 ntBASIC4.39□□□□□ -1.71
HttP42859 Gm11408-201ENSMUST00000117889 519 ntBASIC4.39□□□□□ -1.71
HttP42859 Gm12465-201ENSMUST00000118591 300 ntBASIC4.39□□□□□ -1.71
HttP42859 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
HttP42859 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
HttP42859 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HttP42859 Gm42926-201ENSMUST00000200496 697 ntBASIC4.39□□□□□ -1.71
HttP42859 Olfr712-ps1-201ENSMUST00000207690 950 ntBASIC4.39□□□□□ -1.71
HttP42859 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HttP42859 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HttP42859 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
HttP42859 Itch-202ENSMUST00000109685 5309 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HttP42859 Rora-201ENSMUST00000034766 10878 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HttP42859 Malat1-201ENSMUST00000172812 6983 ntBASIC4.39□□□□□ -1.71
HttP42859 Olfr506-202ENSMUST00000209296 3228 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
HttP42859 Olfr943-205ENSMUST00000215770 8308 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
HttP42859 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
HttP42859 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC4.39□□□□□ -1.71
HttP42859 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HttP42859 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HttP42859 4930425K10Rik-201ENSMUST00000201190 745 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HttP42859 Ablim1-201ENSMUST00000079360 7152 ntAPPRIS P3 TSL 5 BASIC4.39□□□□□ -1.71
HttP42859 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
HttP42859 AC152162.1-201ENSMUST00000225910 2917 ntBASIC4.39□□□□□ -1.71
HttP42859 Kat6b-ps2-201ENSMUST00000188339 1600 ntBASIC4.39□□□□□ -1.71
HttP42859 Fmo5-203ENSMUST00000107050 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HttP42859 AC103672.2-201ENSMUST00000228146 1687 ntBASIC4.39□□□□□ -1.71
HttP42859 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms