Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Col18a1P39061 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Col18a1P39061 Gm37283-201ENSMUST00000193111 1571 ntBASIC6.62□□□□□ -1.35
Col18a1P39061 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
Col18a1P39061 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Col18a1P39061 Hecw1-201ENSMUST00000110516 9460 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Col18a1P39061 Gm15125-201ENSMUST00000116185 800 ntBASIC6.62□□□□□ -1.35
Col18a1P39061 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC6.62□□□□□ -1.35
Col18a1P39061 Gm22792-201ENSMUST00000157225 133 ntBASIC6.62□□□□□ -1.35
Col18a1P39061 Gm24507-201ENSMUST00000157683 134 ntBASIC6.62□□□□□ -1.35
Col18a1P39061 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Col18a1P39061 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC6.62□□□□□ -1.35
Col18a1P39061 Gm26652-202ENSMUST00000181672 475 ntBASIC6.62□□□□□ -1.35
Col18a1P39061 Dlx6os1-204ENSMUST00000184182 146 ntBASIC6.62□□□□□ -1.35
Col18a1P39061 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Col18a1P39061 Gm38231-201ENSMUST00000192030 347 ntBASIC6.62□□□□□ -1.35
Col18a1P39061 Gm42622-201ENSMUST00000197229 355 ntBASIC6.62□□□□□ -1.35
Col18a1P39061 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Col18a1P39061 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Col18a1P39061 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC6.62□□□□□ -1.35
Col18a1P39061 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC6.62□□□□□ -1.35
Col18a1P39061 Olfr589-202ENSMUST00000218483 966 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Col18a1P39061 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC6.62□□□□□ -1.35
Col18a1P39061 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC6.62□□□□□ -1.35
Col18a1P39061 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Col18a1P39061 Gm19134-201ENSMUST00000221203 487 ntBASIC6.62□□□□□ -1.35
Col18a1P39061 AC165283.1-201ENSMUST00000223390 307 ntBASIC6.62□□□□□ -1.35
Col18a1P39061 Gm7984-201ENSMUST00000060640 538 ntBASIC6.62□□□□□ -1.35
Col18a1P39061 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Col18a1P39061 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Col18a1P39061 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Col18a1P39061 Olfr875-201ENSMUST00000080634 1004 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Col18a1P39061 Gm26330-201ENSMUST00000082817 104 ntBASIC6.62□□□□□ -1.35
Col18a1P39061 Gm23464-201ENSMUST00000083145 147 ntBASIC6.62□□□□□ -1.35
Col18a1P39061 n-R5s167-201ENSMUST00000083227 121 ntBASIC6.62□□□□□ -1.35
Col18a1P39061 Gm43485-201ENSMUST00000199292 1710 ntBASIC6.62□□□□□ -1.35
Col18a1P39061 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
Col18a1P39061 Olfr998-202ENSMUST00000215083 1399 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Col18a1P39061 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col18a1P39061 Gm19074-201ENSMUST00000218915 1429 ntBASIC6.61□□□□□ -1.35
Col18a1P39061 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col18a1P39061 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC6.61□□□□□ -1.35
Col18a1P39061 AC142245.1-201ENSMUST00000226611 1505 ntBASIC6.61□□□□□ -1.35
Col18a1P39061 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col18a1P39061 Zfp143-205ENSMUST00000211798 2631 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col18a1P39061 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Col18a1P39061 Olfr1500-205ENSMUST00000216287 2178 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Col18a1P39061 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col18a1P39061 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Col18a1P39061 Klrc2-205ENSMUST00000145984 2811 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Col18a1P39061 Gm24792-201ENSMUST00000104286 128 ntBASIC6.61□□□□□ -1.35
Col18a1P39061 Gm13195-201ENSMUST00000117229 261 ntBASIC6.61□□□□□ -1.35
Col18a1P39061 Gm11699-201ENSMUST00000119016 401 ntBASIC6.61□□□□□ -1.35
Col18a1P39061 Gm12587-201ENSMUST00000120180 427 ntBASIC6.61□□□□□ -1.35
Col18a1P39061 Gm24751-201ENSMUST00000157844 102 ntBASIC6.61□□□□□ -1.35
Col18a1P39061 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC6.61□□□□□ -1.35
Col18a1P39061 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC6.61□□□□□ -1.35
Col18a1P39061 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Col18a1P39061 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Col18a1P39061 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Col18a1P39061 Gm43198-201ENSMUST00000200927 326 ntBASIC6.61□□□□□ -1.35
Col18a1P39061 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Col18a1P39061 Olfr1486-ps1-201ENSMUST00000208835 220 ntBASIC6.61□□□□□ -1.35
Col18a1P39061 AC154816.2-201ENSMUST00000221918 372 ntTSL 5 BASIC6.61□□□□□ -1.35
Col18a1P39061 AC154329.2-201ENSMUST00000225257 383 ntBASIC6.61□□□□□ -1.35
Col18a1P39061 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col18a1P39061 Gm22578-201ENSMUST00000083730 107 ntBASIC6.61□□□□□ -1.35
Col18a1P39061 Olfr1500-202ENSMUST00000214475 2697 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Col18a1P39061 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Col18a1P39061 Gm37764-201ENSMUST00000194664 2150 ntBASIC6.61□□□□□ -1.35
Col18a1P39061 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC6.61□□□□□ -1.35
Col18a1P39061 Zfp870-201ENSMUST00000178401 5126 ntTSL 5 BASIC6.6□□□□□ -1.35
Col18a1P39061 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col18a1P39061 Olfr1305-202ENSMUST00000213405 1815 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Col18a1P39061 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Col18a1P39061 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Col18a1P39061 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col18a1P39061 Gm43395-201ENSMUST00000198717 2240 ntBASIC6.6□□□□□ -1.35
Col18a1P39061 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col18a1P39061 Gm24581-201ENSMUST00000103962 133 ntBASIC6.6□□□□□ -1.35
Col18a1P39061 Mup-ps13-201ENSMUST00000120662 545 ntBASIC6.6□□□□□ -1.35
Col18a1P39061 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC6.6□□□□□ -1.35
Col18a1P39061 Gm26487-201ENSMUST00000158022 94 ntBASIC6.6□□□□□ -1.35
Col18a1P39061 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC6.6□□□□□ -1.35
Col18a1P39061 Zfp950-206ENSMUST00000178819 171 ntBASIC6.6□□□□□ -1.35
Col18a1P39061 1700074H08Rik-201ENSMUST00000189831 555 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Col18a1P39061 Gm34783-201ENSMUST00000209159 303 ntBASIC6.6□□□□□ -1.35
Col18a1P39061 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC6.6□□□□□ -1.35
Col18a1P39061 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Col18a1P39061 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC6.6□□□□□ -1.35
Col18a1P39061 Olfr338-202ENSMUST00000091006 921 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Col18a1P39061 Olfr1253-201ENSMUST00000099765 957 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Col18a1P39061 Gm37914-201ENSMUST00000195317 2679 ntBASIC6.6□□□□□ -1.35
Col18a1P39061 AC122408.2-201ENSMUST00000217901 1391 ntBASIC6.6□□□□□ -1.35
Col18a1P39061 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Col18a1P39061 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Col18a1P39061 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Col18a1P39061 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Col18a1P39061 Gm43314-201ENSMUST00000196744 2231 ntBASIC6.6□□□□□ -1.35
Col18a1P39061 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 101.7 ms