Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 AC153553.1-201ENSMUST00000218257 684 ntBASIC4.98□□□□□ -1.61
Hoxc11P31313 AC123064.1-201ENSMUST00000218950 406 ntBASIC4.98□□□□□ -1.61
Hoxc11P31313 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC4.98□□□□□ -1.61
Hoxc11P31313 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC4.98□□□□□ -1.61
Hoxc11P31313 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC4.98□□□□□ -1.61
Hoxc11P31313 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC4.98□□□□□ -1.61
Hoxc11P31313 AC158523.2-201ENSMUST00000222708 548 ntBASIC4.98□□□□□ -1.61
Hoxc11P31313 AC163664.1-201ENSMUST00000226251 1248 ntBASIC4.98□□□□□ -1.61
Hoxc11P31313 AC130673.2-201ENSMUST00000228091 797 ntBASIC4.98□□□□□ -1.61
Hoxc11P31313 Gm6369-201ENSMUST00000069626 412 ntBASIC4.98□□□□□ -1.61
Hoxc11P31313 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC4.98□□□□□ -1.61
Hoxc11P31313 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Hoxc11P31313 Gm23677-201ENSMUST00000083156 104 ntBASIC4.98□□□□□ -1.61
Hoxc11P31313 Gm24763-201ENSMUST00000083688 190 ntBASIC4.98□□□□□ -1.61
Hoxc11P31313 Olfr625-ps1-201ENSMUST00000098195 966 ntAPPRIS P5 BASIC4.98□□□□□ -1.61
Hoxc11P31313 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Hoxc11P31313 Gm14781-201ENSMUST00000078469 1360 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Hoxc11P31313 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Hoxc11P31313 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Hoxc11P31313 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Hoxc11P31313 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Hoxc11P31313 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Hoxc11P31313 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Hoxc11P31313 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Hoxc11P31313 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Hoxc11P31313 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Hoxc11P31313 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Hoxc11P31313 AC129085.3-201ENSMUST00000225686 1705 ntBASIC4.97□□□□□ -1.61
Hoxc11P31313 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Hoxc11P31313 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Hoxc11P31313 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
Hoxc11P31313 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
Hoxc11P31313 AC112274.1-201ENSMUST00000218957 4274 ntBASIC4.97□□□□□ -1.61
Hoxc11P31313 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Hoxc11P31313 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Hoxc11P31313 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Hoxc11P31313 Gm29084-201ENSMUST00000185587 1452 ntBASIC4.97□□□□□ -1.61
Hoxc11P31313 Gm25418-201ENSMUST00000104214 129 ntBASIC4.97□□□□□ -1.61
Hoxc11P31313 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
Hoxc11P31313 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Hoxc11P31313 Gm14046-201ENSMUST00000119389 509 ntBASIC4.97□□□□□ -1.61
Hoxc11P31313 Gm12287-201ENSMUST00000119770 707 ntBASIC4.97□□□□□ -1.61
Hoxc11P31313 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC4.97□□□□□ -1.61
Hoxc11P31313 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Hoxc11P31313 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC4.97□□□□□ -1.61
Hoxc11P31313 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Hoxc11P31313 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
Hoxc11P31313 Gm27551-201ENSMUST00000184258 77 ntBASIC4.97□□□□□ -1.61
Hoxc11P31313 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC4.97□□□□□ -1.61
Hoxc11P31313 1700084F23Rik-205ENSMUST00000191362 743 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Hoxc11P31313 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC4.97□□□□□ -1.61
Hoxc11P31313 Gm5660-201ENSMUST00000197453 1149 ntBASIC4.97□□□□□ -1.61
Hoxc11P31313 Gm43015-201ENSMUST00000199087 565 ntBASIC4.97□□□□□ -1.61
Hoxc11P31313 Gm43825-201ENSMUST00000199650 734 ntBASIC4.97□□□□□ -1.61
Hoxc11P31313 Gm43794-201ENSMUST00000200971 692 ntBASIC4.97□□□□□ -1.61
Hoxc11P31313 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC4.97□□□□□ -1.61
Hoxc11P31313 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC4.97□□□□□ -1.61
Hoxc11P31313 Gm44988-201ENSMUST00000203835 1161 ntBASIC4.97□□□□□ -1.61
Hoxc11P31313 Gm44307-201ENSMUST00000204466 764 ntBASIC4.97□□□□□ -1.61
Hoxc11P31313 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC4.97□□□□□ -1.61
Hoxc11P31313 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Hoxc11P31313 Olfr854-202ENSMUST00000212872 939 ntAPPRIS ALT2 BASIC4.97□□□□□ -1.61
Hoxc11P31313 AC113305.1-201ENSMUST00000214664 724 ntBASIC4.97□□□□□ -1.61
Hoxc11P31313 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Hoxc11P31313 AC161256.1-201ENSMUST00000217312 213 ntBASIC4.97□□□□□ -1.61
Hoxc11P31313 AC158807.1-201ENSMUST00000217959 187 ntBASIC4.97□□□□□ -1.61
Hoxc11P31313 AC140209.1-204ENSMUST00000226736 739 ntBASIC4.97□□□□□ -1.61
Hoxc11P31313 Gm25818-201ENSMUST00000083282 164 ntBASIC4.97□□□□□ -1.61
Hoxc11P31313 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
Hoxc11P31313 Spink13-201ENSMUST00000097557 796 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Hoxc11P31313 Olfr679-201ENSMUST00000098158 952 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Hoxc11P31313 Vmn1r55-201ENSMUST00000098844 1284 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Hoxc11P31313 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC4.97□□□□□ -1.61
Hoxc11P31313 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC4.97□□□□□ -1.61
Hoxc11P31313 Galnt1-208ENSMUST00000178605 3796 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Hoxc11P31313 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Hoxc11P31313 Gm38248-201ENSMUST00000193744 5783 ntBASIC4.97□□□□□ -1.61
Hoxc11P31313 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Hoxc11P31313 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Hoxc11P31313 Gm15624-203ENSMUST00000204811 3402 ntBASIC4.97□□□□□ -1.61
Hoxc11P31313 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Hoxc11P31313 Gm45577-201ENSMUST00000210206 2287 ntBASIC4.97□□□□□ -1.61
Hoxc11P31313 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Hoxc11P31313 Gm42910-201ENSMUST00000198917 2921 ntBASIC4.96□□□□□ -1.61
Hoxc11P31313 Gm43027-201ENSMUST00000202906 3691 ntBASIC4.96□□□□□ -1.61
Hoxc11P31313 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
Hoxc11P31313 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
Hoxc11P31313 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Hoxc11P31313 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Hoxc11P31313 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Hoxc11P31313 Obox5-201ENSMUST00000098802 1831 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Hoxc11P31313 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Hoxc11P31313 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Hoxc11P31313 Gm24578-201ENSMUST00000103970 129 ntBASIC4.96□□□□□ -1.62
Hoxc11P31313 Gm24160-201ENSMUST00000104594 126 ntBASIC4.96□□□□□ -1.62
Hoxc11P31313 Gm14050-201ENSMUST00000117052 346 ntBASIC4.96□□□□□ -1.62
Hoxc11P31313 Gm14854-201ENSMUST00000117758 841 ntBASIC4.96□□□□□ -1.62
Hoxc11P31313 Gm3267-201ENSMUST00000118671 473 ntBASIC4.96□□□□□ -1.62
Hoxc11P31313 Gm12734-201ENSMUST00000120228 948 ntBASIC4.96□□□□□ -1.62
Hoxc11P31313 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms