Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm25116-201ENSMUST00000157191 122 ntBASIC4.9□□□□□ -1.62
Col2a1P28481 Gm22792-201ENSMUST00000157225 133 ntBASIC4.9□□□□□ -1.62
Col2a1P28481 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
Col2a1P28481 Gm26723-201ENSMUST00000180771 787 ntTSL 5 BASIC4.9□□□□□ -1.62
Col2a1P28481 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
Col2a1P28481 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC4.9□□□□□ -1.62
Col2a1P28481 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
Col2a1P28481 Gm18016-201ENSMUST00000216119 801 ntBASIC4.9□□□□□ -1.62
Col2a1P28481 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC4.9□□□□□ -1.62
Col2a1P28481 AC162183.1-202ENSMUST00000225434 904 ntBASIC4.9□□□□□ -1.62
Col2a1P28481 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
Col2a1P28481 Mir202-201ENSMUST00000083568 72 ntBASIC4.9□□□□□ -1.62
Col2a1P28481 Olfr338-202ENSMUST00000091006 921 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
Col2a1P28481 Gm43329-201ENSMUST00000200120 3232 ntBASIC4.9□□□□□ -1.62
Col2a1P28481 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Col2a1P28481 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Col2a1P28481 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC4.9□□□□□ -1.63
Col2a1P28481 Mga-201ENSMUST00000046717 11982 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
Col2a1P28481 Gm38248-201ENSMUST00000193744 5783 ntBASIC4.9□□□□□ -1.63
Col2a1P28481 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Col2a1P28481 Gm18180-201ENSMUST00000187562 1484 ntBASIC4.89□□□□□ -1.63
Col2a1P28481 Gm45137-201ENSMUST00000208652 4415 ntBASIC4.89□□□□□ -1.63
Col2a1P28481 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Col2a1P28481 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Col2a1P28481 Gm12173-201ENSMUST00000117622 273 ntBASIC4.89□□□□□ -1.63
Col2a1P28481 Gm2182-201ENSMUST00000145243 663 ntBASIC4.89□□□□□ -1.63
Col2a1P28481 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC4.89□□□□□ -1.63
Col2a1P28481 Gm26373-201ENSMUST00000157833 103 ntBASIC4.89□□□□□ -1.63
Col2a1P28481 Gm8498-201ENSMUST00000188227 974 ntBASIC4.89□□□□□ -1.63
Col2a1P28481 Gm43559-201ENSMUST00000198755 466 ntBASIC4.89□□□□□ -1.63
Col2a1P28481 Gm44879-201ENSMUST00000207007 503 ntBASIC4.89□□□□□ -1.63
Col2a1P28481 Gm45523-201ENSMUST00000210712 799 ntBASIC4.89□□□□□ -1.63
Col2a1P28481 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Col2a1P28481 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Col2a1P28481 Gm37011-201ENSMUST00000195543 2935 ntBASIC4.89□□□□□ -1.63
Col2a1P28481 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
Col2a1P28481 AC163032.1-201ENSMUST00000220671 2970 ntBASIC4.89□□□□□ -1.63
Col2a1P28481 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Col2a1P28481 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
Col2a1P28481 Olfr1443-201ENSMUST00000049724 4343 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Col2a1P28481 Gm28445-201ENSMUST00000187686 1498 ntTSL 5 BASIC4.89□□□□□ -1.63
Col2a1P28481 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Col2a1P28481 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Col2a1P28481 Gm15581-201ENSMUST00000131334 5640 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Col2a1P28481 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Col2a1P28481 Vmn1r5-203ENSMUST00000228276 3188 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Col2a1P28481 Gm26075-201ENSMUST00000104062 121 ntBASIC4.88□□□□□ -1.63
Col2a1P28481 Gm25169-201ENSMUST00000104190 129 ntBASIC4.88□□□□□ -1.63
Col2a1P28481 Gm9003-201ENSMUST00000121810 482 ntBASIC4.88□□□□□ -1.63
Col2a1P28481 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col2a1P28481 Gm37741-201ENSMUST00000191768 1256 ntBASIC4.88□□□□□ -1.63
Col2a1P28481 Gm37857-201ENSMUST00000191784 1199 ntBASIC4.88□□□□□ -1.63
Col2a1P28481 Gm44765-201ENSMUST00000206927 601 ntBASIC4.88□□□□□ -1.63
Col2a1P28481 Olfr44-203ENSMUST00000216316 1078 ntAPPRIS ALT2 TSL 3 BASIC4.88□□□□□ -1.63
Col2a1P28481 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC4.88□□□□□ -1.63
Col2a1P28481 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col2a1P28481 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC4.88□□□□□ -1.63
Col2a1P28481 Olfr44-201ENSMUST00000077757 1071 ntAPPRIS P2 TSL 3 BASIC4.88□□□□□ -1.63
Col2a1P28481 Rps27a-ps2-201ENSMUST00000078766 467 ntBASIC4.88□□□□□ -1.63
Col2a1P28481 Olfr846-201ENSMUST00000078774 942 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Col2a1P28481 Gm23927-201ENSMUST00000082466 215 ntBASIC4.88□□□□□ -1.63
Col2a1P28481 Gm46199-201ENSMUST00000220373 1693 ntBASIC4.88□□□□□ -1.63
Col2a1P28481 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col2a1P28481 Gm37569-201ENSMUST00000192111 1722 ntBASIC4.88□□□□□ -1.63
Col2a1P28481 Gm38235-201ENSMUST00000194600 4952 ntBASIC4.88□□□□□ -1.63
Col2a1P28481 AC149588.1-201ENSMUST00000228274 3745 ntBASIC4.88□□□□□ -1.63
Col2a1P28481 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Col2a1P28481 Olfr1082-201ENSMUST00000215600 1620 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
Col2a1P28481 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC4.88□□□□□ -1.63
Col2a1P28481 Gm14103-201ENSMUST00000119075 366 ntBASIC4.88□□□□□ -1.63
Col2a1P28481 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC4.88□□□□□ -1.63
Col2a1P28481 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Col2a1P28481 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC4.88□□□□□ -1.63
Col2a1P28481 Gm20795-201ENSMUST00000178528 699 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Col2a1P28481 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Col2a1P28481 Gm29634-201ENSMUST00000188467 696 ntBASIC4.88□□□□□ -1.63
Col2a1P28481 Gm28699-201ENSMUST00000189193 696 ntBASIC4.88□□□□□ -1.63
Col2a1P28481 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
Col2a1P28481 4930425K10Rik-201ENSMUST00000201190 745 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Col2a1P28481 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Col2a1P28481 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Col2a1P28481 Gm7233-201ENSMUST00000168619 1761 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Col2a1P28481 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Col2a1P28481 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Col2a1P28481 Zfp11-201ENSMUST00000049778 3929 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Col2a1P28481 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC4.87□□□□□ -1.63
Col2a1P28481 Vmn1r17-203ENSMUST00000228156 2090 ntAPPRIS ALT2 BASIC4.87□□□□□ -1.63
Col2a1P28481 Gm45555-201ENSMUST00000210028 2602 ntBASIC4.87□□□□□ -1.63
Col2a1P28481 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Col2a1P28481 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Col2a1P28481 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Col2a1P28481 Gm24935-201ENSMUST00000103770 110 ntBASIC4.87□□□□□ -1.63
Col2a1P28481 Gm23319-201ENSMUST00000104467 131 ntBASIC4.87□□□□□ -1.63
Col2a1P28481 Gm15553-201ENSMUST00000118757 430 ntBASIC4.87□□□□□ -1.63
Col2a1P28481 Gm5924-201ENSMUST00000132554 871 ntBASIC4.87□□□□□ -1.63
Col2a1P28481 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC4.87□□□□□ -1.63
Col2a1P28481 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC4.87□□□□□ -1.63
Col2a1P28481 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Col2a1P28481 Gm24850-201ENSMUST00000158029 119 ntBASIC4.87□□□□□ -1.63
Col2a1P28481 Gm24503-201ENSMUST00000158454 135 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 106.5 ms