Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC3.68□□□□□ -1.82
Sdc1P18828 1700034K08Rik-202ENSMUST00000188082 619 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Sdc1P18828 1700052I22Rik-201ENSMUST00000190431 379 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Sdc1P18828 Gm37636-201ENSMUST00000193583 359 ntBASIC3.68□□□□□ -1.82
Sdc1P18828 9430087J23Rik-201ENSMUST00000195414 1152 ntBASIC3.68□□□□□ -1.82
Sdc1P18828 Gm43765-201ENSMUST00000196303 893 ntBASIC3.68□□□□□ -1.82
Sdc1P18828 Clec2g-206ENSMUST00000204259 893 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Sdc1P18828 Cyp2b27-ps-201ENSMUST00000205582 1279 ntBASIC3.68□□□□□ -1.82
Sdc1P18828 Gm4083-201ENSMUST00000207158 451 ntBASIC3.68□□□□□ -1.82
Sdc1P18828 Gm44681-201ENSMUST00000208447 842 ntBASIC3.68□□□□□ -1.82
Sdc1P18828 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC3.68□□□□□ -1.82
Sdc1P18828 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Sdc1P18828 AC160134.1-201ENSMUST00000213450 551 ntBASIC3.68□□□□□ -1.82
Sdc1P18828 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Sdc1P18828 AC164437.2-201ENSMUST00000228915 797 ntBASIC3.68□□□□□ -1.82
Sdc1P18828 Olfr855-201ENSMUST00000061693 992 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Sdc1P18828 Gm23510-201ENSMUST00000083083 163 ntBASIC3.68□□□□□ -1.82
Sdc1P18828 Olfr1162-201ENSMUST00000099837 945 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Sdc1P18828 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
Sdc1P18828 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Sdc1P18828 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Sdc1P18828 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
Sdc1P18828 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Sdc1P18828 Gm45137-201ENSMUST00000208652 4415 ntBASIC3.67□□□□□ -1.82
Sdc1P18828 Gm42486-201ENSMUST00000200369 3486 ntBASIC3.67□□□□□ -1.82
Sdc1P18828 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Sdc1P18828 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
Sdc1P18828 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Sdc1P18828 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Sdc1P18828 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC3.67□□□□□ -1.82
Sdc1P18828 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
Sdc1P18828 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC3.67□□□□□ -1.82
Sdc1P18828 Gm11550-201ENSMUST00000118210 699 ntBASIC3.67□□□□□ -1.82
Sdc1P18828 Gm14771-201ENSMUST00000118249 203 ntBASIC3.67□□□□□ -1.82
Sdc1P18828 Olfr587-ps1-201ENSMUST00000118378 948 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Sdc1P18828 Gm11890-201ENSMUST00000119585 417 ntBASIC3.67□□□□□ -1.82
Sdc1P18828 Gm14559-201ENSMUST00000121745 496 ntBASIC3.67□□□□□ -1.82
Sdc1P18828 Speer3-201ENSMUST00000124677 1192 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Sdc1P18828 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC3.67□□□□□ -1.82
Sdc1P18828 Gm22819-201ENSMUST00000157445 303 ntBASIC3.67□□□□□ -1.82
Sdc1P18828 Mir1946a-201ENSMUST00000158360 134 ntBASIC3.67□□□□□ -1.82
Sdc1P18828 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC3.67□□□□□ -1.82
Sdc1P18828 Gm15508-201ENSMUST00000160330 325 ntBASIC3.67□□□□□ -1.82
Sdc1P18828 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC3.67□□□□□ -1.82
Sdc1P18828 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC3.67□□□□□ -1.82
Sdc1P18828 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC3.67□□□□□ -1.82
Sdc1P18828 Gm20812-202ENSMUST00000189550 1230 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Sdc1P18828 1700074H08Rik-201ENSMUST00000189831 555 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Sdc1P18828 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC3.67□□□□□ -1.82
Sdc1P18828 Gm37609-201ENSMUST00000191778 678 ntBASIC3.67□□□□□ -1.82
Sdc1P18828 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC3.67□□□□□ -1.82
Sdc1P18828 Gng12-208ENSMUST00000204511 739 ntTSL 5 BASIC3.67□□□□□ -1.82
Sdc1P18828 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Sdc1P18828 AC140409.4-201ENSMUST00000215757 538 ntBASIC3.67□□□□□ -1.82
Sdc1P18828 Gm5649-201ENSMUST00000217918 951 ntBASIC3.67□□□□□ -1.82
Sdc1P18828 Gm19599-201ENSMUST00000218898 358 ntBASIC3.67□□□□□ -1.82
Sdc1P18828 AC158641.1-201ENSMUST00000218933 229 ntBASIC3.67□□□□□ -1.82
Sdc1P18828 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC3.67□□□□□ -1.82
Sdc1P18828 AC154623.1-201ENSMUST00000224348 805 ntBASIC3.67□□□□□ -1.82
Sdc1P18828 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Sdc1P18828 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Sdc1P18828 Gm16335-201ENSMUST00000077495 309 ntBASIC3.67□□□□□ -1.82
Sdc1P18828 Rpl35a-ps7-201ENSMUST00000080603 333 ntBASIC3.67□□□□□ -1.82
Sdc1P18828 Gm23972-201ENSMUST00000083322 165 ntBASIC3.67□□□□□ -1.82
Sdc1P18828 Olfr1407-ps1-201ENSMUST00000085885 797 ntBASIC3.67□□□□□ -1.82
Sdc1P18828 Olfr593-201ENSMUST00000098206 984 ntAPPRIS P2 BASIC3.67□□□□□ -1.82
Sdc1P18828 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC3.67□□□□□ -1.82
Sdc1P18828 Gm16421-201ENSMUST00000117616 1557 ntBASIC3.67□□□□□ -1.82
Sdc1P18828 Gm44682-201ENSMUST00000208501 2614 ntBASIC3.67□□□□□ -1.82
Sdc1P18828 AC101945.4-201ENSMUST00000228464 1976 ntBASIC3.67□□□□□ -1.82
Sdc1P18828 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Sdc1P18828 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Sdc1P18828 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC3.66□□□□□ -1.82
Sdc1P18828 Olfr1082-201ENSMUST00000215600 1620 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
Sdc1P18828 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Trbv20-201ENSMUST00000103277 335 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Sdc1P18828 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Sdc1P18828 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm22372-201ENSMUST00000104589 136 ntBASIC3.66□□□□□ -1.82
Sdc1P18828 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm14305-201ENSMUST00000108980 1167 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm13664-201ENSMUST00000117304 345 ntBASIC3.66□□□□□ -1.82
Sdc1P18828 Gm14163-201ENSMUST00000117342 217 ntBASIC3.66□□□□□ -1.82
Sdc1P18828 Gm11719-201ENSMUST00000119399 351 ntBASIC3.66□□□□□ -1.82
Sdc1P18828 Gm13170-201ENSMUST00000119716 643 ntBASIC3.66□□□□□ -1.82
Sdc1P18828 Gm15490-201ENSMUST00000119894 387 ntBASIC3.66□□□□□ -1.82
Sdc1P18828 Gm15926-201ENSMUST00000120492 550 ntBASIC3.66□□□□□ -1.82
Sdc1P18828 Gm3160-201ENSMUST00000128343 607 ntBASIC3.66□□□□□ -1.82
Sdc1P18828 Gm13335-201ENSMUST00000129994 471 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm10059-201ENSMUST00000131139 171 ntBASIC3.66□□□□□ -1.82
Sdc1P18828 Gm12833-201ENSMUST00000136112 477 ntBASIC3.66□□□□□ -1.82
Sdc1P18828 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC3.66□□□□□ -1.82
Sdc1P18828 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm23499-201ENSMUST00000157736 268 ntBASIC3.66□□□□□ -1.82
Sdc1P18828 Gm25520-201ENSMUST00000158389 118 ntBASIC3.66□□□□□ -1.82
Sdc1P18828 Gm23386-201ENSMUST00000158585 144 ntBASIC3.66□□□□□ -1.82
Sdc1P18828 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Sdc1P18828 Gm18560-201ENSMUST00000173463 1123 ntBASIC3.66□□□□□ -1.82
Sdc1P18828 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms