Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm43631-201ENSMUST00000202011 369 ntBASIC3.9□□□□□ -1.79
Cdx1P18111 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC3.9□□□□□ -1.79
Cdx1P18111 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Cdx1P18111 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Cdx1P18111 Gm7439-201ENSMUST00000214053 835 ntBASIC3.9□□□□□ -1.79
Cdx1P18111 Gm7588-201ENSMUST00000216866 571 ntBASIC3.9□□□□□ -1.79
Cdx1P18111 CT025616.1-201ENSMUST00000221158 412 ntBASIC3.9□□□□□ -1.79
Cdx1P18111 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC3.9□□□□□ -1.79
Cdx1P18111 AC160999.1-201ENSMUST00000225675 810 ntBASIC3.9□□□□□ -1.79
Cdx1P18111 AC158142.3-201ENSMUST00000226230 675 ntBASIC3.9□□□□□ -1.79
Cdx1P18111 CT030238.1-201ENSMUST00000228393 442 ntBASIC3.9□□□□□ -1.79
Cdx1P18111 Olfr974-201ENSMUST00000062833 1080 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Cdx1P18111 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Cdx1P18111 Mir129-1-201ENSMUST00000083535 73 ntBASIC3.9□□□□□ -1.79
Cdx1P18111 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Cdx1P18111 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Cdx1P18111 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.79
Cdx1P18111 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
Cdx1P18111 Gm21778-202ENSMUST00000185926 1482 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Cdx1P18111 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Cdx1P18111 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Cdx1P18111 Gm13575-201ENSMUST00000142353 1520 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Cdx1P18111 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Cdx1P18111 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Cdx1P18111 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Cdx1P18111 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Cdx1P18111 Gm13100-201ENSMUST00000117157 1439 ntBASIC3.89□□□□□ -1.79
Cdx1P18111 Gm42615-201ENSMUST00000197704 1820 ntBASIC3.89□□□□□ -1.79
Cdx1P18111 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Cdx1P18111 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Cdx1P18111 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
Cdx1P18111 Gm12448-201ENSMUST00000118852 655 ntBASIC3.89□□□□□ -1.79
Cdx1P18111 Gm14926-201ENSMUST00000120650 508 ntBASIC3.89□□□□□ -1.79
Cdx1P18111 Gm11909-201ENSMUST00000121424 759 ntBASIC3.89□□□□□ -1.79
Cdx1P18111 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC3.89□□□□□ -1.79
Cdx1P18111 Scarna13-201ENSMUST00000158164 275 ntBASIC3.89□□□□□ -1.79
Cdx1P18111 Gm23513-201ENSMUST00000158181 133 ntBASIC3.89□□□□□ -1.79
Cdx1P18111 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Cdx1P18111 Rian-214ENSMUST00000183026 596 ntTSL 5 BASIC3.89□□□□□ -1.79
Cdx1P18111 Gm18406-201ENSMUST00000185872 669 ntBASIC3.89□□□□□ -1.79
Cdx1P18111 Gm5252-201ENSMUST00000189030 909 ntBASIC3.89□□□□□ -1.79
Cdx1P18111 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
Cdx1P18111 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
Cdx1P18111 Gm37908-201ENSMUST00000195828 470 ntBASIC3.89□□□□□ -1.79
Cdx1P18111 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Cdx1P18111 Gm44237-201ENSMUST00000205183 936 ntBASIC3.89□□□□□ -1.79
Cdx1P18111 Gm45215-201ENSMUST00000206407 395 ntBASIC3.89□□□□□ -1.79
Cdx1P18111 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Cdx1P18111 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC3.89□□□□□ -1.79
Cdx1P18111 Prl2a1-201ENSMUST00000023602 884 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Cdx1P18111 Olfr741-201ENSMUST00000071932 936 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Cdx1P18111 Csn1s2b-201ENSMUST00000072539 810 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
Cdx1P18111 Gm6065-201ENSMUST00000081336 492 ntBASIC3.89□□□□□ -1.79
Cdx1P18111 AC123858.1-201ENSMUST00000226948 1874 ntBASIC3.89□□□□□ -1.79
Cdx1P18111 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Cdx1P18111 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Cdx1P18111 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC3.89□□□□□ -1.79
Cdx1P18111 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Cdx1P18111 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC3.89□□□□□ -1.79
Cdx1P18111 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Cdx1P18111 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Cdx1P18111 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Cdx1P18111 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Cdx1P18111 E430024I08Rik-208ENSMUST00000223312 1573 ntTSL 5 BASIC3.89□□□□□ -1.79
Cdx1P18111 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Cdx1P18111 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Cdx1P18111 Vmn1r5-202ENSMUST00000226130 3393 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Cdx1P18111 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
Cdx1P18111 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
Cdx1P18111 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Cdx1P18111 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Cdx1P18111 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
Cdx1P18111 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Cdx1P18111 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
Cdx1P18111 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
Cdx1P18111 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC3.88□□□□□ -1.79
Cdx1P18111 AC155922.2-201ENSMUST00000220240 1458 ntTSL 5 BASIC3.88□□□□□ -1.79
Cdx1P18111 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Cdx1P18111 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Cdx1P18111 Gm24578-201ENSMUST00000103970 129 ntBASIC3.88□□□□□ -1.79
Cdx1P18111 Gm24429-201ENSMUST00000104076 132 ntBASIC3.88□□□□□ -1.79
Cdx1P18111 Cd200r3-204ENSMUST00000114612 731 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Cdx1P18111 Gm13250-201ENSMUST00000117209 753 ntBASIC3.88□□□□□ -1.79
Cdx1P18111 Gm15426-201ENSMUST00000117823 556 ntBASIC3.88□□□□□ -1.79
Cdx1P18111 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC3.88□□□□□ -1.79
Cdx1P18111 Gm14874-201ENSMUST00000118995 438 ntBASIC3.88□□□□□ -1.79
Cdx1P18111 Gm15603-201ENSMUST00000119252 492 ntBASIC3.88□□□□□ -1.79
Cdx1P18111 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC3.88□□□□□ -1.79
Cdx1P18111 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Cdx1P18111 Gm16345-201ENSMUST00000146065 158 ntBASIC3.88□□□□□ -1.79
Cdx1P18111 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC3.88□□□□□ -1.79
Cdx1P18111 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC3.88□□□□□ -1.79
Cdx1P18111 Gm23327-201ENSMUST00000157420 78 ntBASIC3.88□□□□□ -1.79
Cdx1P18111 Gm15716-201ENSMUST00000162457 404 ntTSL 3 BASIC3.88□□□□□ -1.79
Cdx1P18111 Gm6245-201ENSMUST00000164699 768 ntBASIC3.88□□□□□ -1.79
Cdx1P18111 Mir5103-201ENSMUST00000175111 79 ntBASIC3.88□□□□□ -1.79
Cdx1P18111 Gm20674-201ENSMUST00000177452 369 ntBASIC3.88□□□□□ -1.79
Cdx1P18111 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Cdx1P18111 Gm26925-201ENSMUST00000182470 957 ntBASIC3.88□□□□□ -1.79
Cdx1P18111 Mir6400-201ENSMUST00000184870 92 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms