Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm22857-201ENSMUST00000174969 134 ntBASIC5.22□□□□□ -1.57
Pcdh1F7BJK1 Gm21815-201ENSMUST00000178213 664 ntBASIC5.22□□□□□ -1.57
Pcdh1F7BJK1 Gm4076-201ENSMUST00000179230 965 ntBASIC5.22□□□□□ -1.57
Pcdh1F7BJK1 Gm21638-201ENSMUST00000179473 836 ntBASIC5.22□□□□□ -1.57
Pcdh1F7BJK1 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Pcdh1F7BJK1 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC5.22□□□□□ -1.57
Pcdh1F7BJK1 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Pcdh1F7BJK1 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Pcdh1F7BJK1 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Pcdh1F7BJK1 Gm43856-201ENSMUST00000197004 369 ntBASIC5.22□□□□□ -1.57
Pcdh1F7BJK1 Gm43018-201ENSMUST00000198075 1275 ntBASIC5.22□□□□□ -1.57
Pcdh1F7BJK1 Gm5990-201ENSMUST00000203126 746 ntBASIC5.22□□□□□ -1.57
Pcdh1F7BJK1 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC5.22□□□□□ -1.57
Pcdh1F7BJK1 Gm5086-201ENSMUST00000210022 1297 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Pcdh1F7BJK1 Gm45850-201ENSMUST00000212536 338 ntBASIC5.22□□□□□ -1.57
Pcdh1F7BJK1 Gm20786-201ENSMUST00000212649 436 ntBASIC5.22□□□□□ -1.57
Pcdh1F7BJK1 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC5.22□□□□□ -1.57
Pcdh1F7BJK1 Olfr936-202ENSMUST00000216912 937 ntBASIC5.22□□□□□ -1.57
Pcdh1F7BJK1 Gm10095-201ENSMUST00000222765 483 ntBASIC5.22□□□□□ -1.57
Pcdh1F7BJK1 AC154390.1-201ENSMUST00000225629 277 ntBASIC5.22□□□□□ -1.57
Pcdh1F7BJK1 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Pcdh1F7BJK1 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC5.22□□□□□ -1.57
Pcdh1F7BJK1 Gm24043-201ENSMUST00000083108 116 ntBASIC5.22□□□□□ -1.57
Pcdh1F7BJK1 n-R5-8s1-201ENSMUST00000083988 148 ntBASIC5.22□□□□□ -1.57
Pcdh1F7BJK1 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Pcdh1F7BJK1 Gm37589-201ENSMUST00000193609 3994 ntBASIC5.22□□□□□ -1.57
Pcdh1F7BJK1 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC5.22□□□□□ -1.57
Pcdh1F7BJK1 Gm37834-201ENSMUST00000194517 3035 ntBASIC5.22□□□□□ -1.57
Pcdh1F7BJK1 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC5.22□□□□□ -1.57
Pcdh1F7BJK1 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
Pcdh1F7BJK1 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Pcdh1F7BJK1 Olfr1310-202ENSMUST00000213559 4897 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Pcdh1F7BJK1 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Pcdh1F7BJK1 Rsrc2-219ENSMUST00000182955 1685 ntTSL 5 BASIC5.21□□□□□ -1.57
Pcdh1F7BJK1 Gm28969-205ENSMUST00000186757 1581 ntTSL 5 BASIC5.21□□□□□ -1.57
Pcdh1F7BJK1 Gm28990-204ENSMUST00000189255 1581 ntTSL 5 BASIC5.21□□□□□ -1.57
Pcdh1F7BJK1 Gm28677-209ENSMUST00000190010 1581 ntTSL 5 BASIC5.21□□□□□ -1.57
Pcdh1F7BJK1 Gm37630-201ENSMUST00000194210 1456 ntBASIC5.21□□□□□ -1.58
Pcdh1F7BJK1 Olfr1087-202ENSMUST00000214141 3861 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Pcdh1F7BJK1 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC5.21□□□□□ -1.58
Pcdh1F7BJK1 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Pcdh1F7BJK1 Gm37482-201ENSMUST00000194899 2791 ntBASIC5.21□□□□□ -1.58
Pcdh1F7BJK1 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Pcdh1F7BJK1 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Pcdh1F7BJK1 Gm14670-201ENSMUST00000117327 337 ntBASIC5.21□□□□□ -1.58
Pcdh1F7BJK1 Gm11256-201ENSMUST00000118109 829 ntBASIC5.21□□□□□ -1.58
Pcdh1F7BJK1 Gm9005-201ENSMUST00000119908 607 ntBASIC5.21□□□□□ -1.58
Pcdh1F7BJK1 Gm12578-201ENSMUST00000121244 417 ntBASIC5.21□□□□□ -1.58
Pcdh1F7BJK1 Gm13531-201ENSMUST00000121893 543 ntBASIC5.21□□□□□ -1.58
Pcdh1F7BJK1 Gm11609-201ENSMUST00000121926 793 ntBASIC5.21□□□□□ -1.58
Pcdh1F7BJK1 Gm13669-201ENSMUST00000122366 457 ntBASIC5.21□□□□□ -1.58
Pcdh1F7BJK1 Gm25782-201ENSMUST00000122526 289 ntBASIC5.21□□□□□ -1.58
Pcdh1F7BJK1 Gm26353-201ENSMUST00000158224 255 ntBASIC5.21□□□□□ -1.58
Pcdh1F7BJK1 Gm22158-201ENSMUST00000158411 126 ntBASIC5.21□□□□□ -1.58
Pcdh1F7BJK1 Gm22945-201ENSMUST00000158557 157 ntBASIC5.21□□□□□ -1.58
Pcdh1F7BJK1 Gm23024-201ENSMUST00000158770 292 ntBASIC5.21□□□□□ -1.58
Pcdh1F7BJK1 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Pcdh1F7BJK1 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC5.21□□□□□ -1.58
Pcdh1F7BJK1 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Pcdh1F7BJK1 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Pcdh1F7BJK1 Gm22852-201ENSMUST00000177899 101 ntBASIC5.21□□□□□ -1.58
Pcdh1F7BJK1 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Pcdh1F7BJK1 Gm7952-201ENSMUST00000180540 984 ntBASIC5.21□□□□□ -1.58
Pcdh1F7BJK1 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC5.21□□□□□ -1.58
Pcdh1F7BJK1 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC5.21□□□□□ -1.58
Pcdh1F7BJK1 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC5.21□□□□□ -1.58
Pcdh1F7BJK1 Gm44316-201ENSMUST00000199274 97 ntBASIC5.21□□□□□ -1.58
Pcdh1F7BJK1 Ighv1-83-201ENSMUST00000199643 351 ntBASIC5.21□□□□□ -1.58
Pcdh1F7BJK1 Gm42896-201ENSMUST00000201249 1113 ntBASIC5.21□□□□□ -1.58
Pcdh1F7BJK1 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC5.21□□□□□ -1.58
Pcdh1F7BJK1 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC5.21□□□□□ -1.58
Pcdh1F7BJK1 Sult2a7-203ENSMUST00000210034 870 ntTSL 5 BASIC5.21□□□□□ -1.58
Pcdh1F7BJK1 Gm45344-201ENSMUST00000211610 341 ntBASIC5.21□□□□□ -1.58
Pcdh1F7BJK1 Gm2628-201ENSMUST00000218019 426 ntBASIC5.21□□□□□ -1.58
Pcdh1F7BJK1 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC5.21□□□□□ -1.58
Pcdh1F7BJK1 AC153840.1-201ENSMUST00000219685 313 ntBASIC5.21□□□□□ -1.58
Pcdh1F7BJK1 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Pcdh1F7BJK1 Gm36607-201ENSMUST00000222750 1087 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Pcdh1F7BJK1 AC160114.2-201ENSMUST00000223021 300 ntBASIC5.21□□□□□ -1.58
Pcdh1F7BJK1 AC163664.2-201ENSMUST00000228894 459 ntBASIC5.21□□□□□ -1.58
Pcdh1F7BJK1 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC5.21□□□□□ -1.58
Pcdh1F7BJK1 Gm7984-201ENSMUST00000060640 538 ntBASIC5.21□□□□□ -1.58
Pcdh1F7BJK1 Olfr1431-201ENSMUST00000072316 939 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Pcdh1F7BJK1 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC5.21□□□□□ -1.58
Pcdh1F7BJK1 Gm24032-201ENSMUST00000083932 159 ntBASIC5.21□□□□□ -1.58
Pcdh1F7BJK1 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Pcdh1F7BJK1 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Pcdh1F7BJK1 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
Pcdh1F7BJK1 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Pcdh1F7BJK1 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Pcdh1F7BJK1 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Pcdh1F7BJK1 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
Pcdh1F7BJK1 Gm8979-201ENSMUST00000183386 7296 ntBASIC5.21□□□□□ -1.58
Pcdh1F7BJK1 Olfr828-202ENSMUST00000215380 1689 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
Pcdh1F7BJK1 P2ry12-201ENSMUST00000050360 2250 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Pcdh1F7BJK1 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Pcdh1F7BJK1 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Pcdh1F7BJK1 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Pcdh1F7BJK1 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Pcdh1F7BJK1 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms