Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Upk3aQ9JKX8 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Upk3aQ9JKX8 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Upk3aQ9JKX8 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
Upk3aQ9JKX8 Olfr362-202ENSMUST00000213817 4059 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Upk3aQ9JKX8 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
Upk3aQ9JKX8 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Upk3aQ9JKX8 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Upk3aQ9JKX8 Gm37124-201ENSMUST00000192140 1992 ntBASIC4.33□□□□□ -1.72
Upk3aQ9JKX8 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Upk3aQ9JKX8 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Upk3aQ9JKX8 Gm8267-201ENSMUST00000165003 1751 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
Upk3aQ9JKX8 Olfr1043-202ENSMUST00000213886 1675 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Upk3aQ9JKX8 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Upk3aQ9JKX8 Olfr556-202ENSMUST00000213485 3825 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Upk3aQ9JKX8 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Upk3aQ9JKX8 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC4.32□□□□□ -1.72
Upk3aQ9JKX8 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Upk3aQ9JKX8 Gm30302-202ENSMUST00000220773 3511 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Upk3aQ9JKX8 AC131743.1-201ENSMUST00000222138 4024 ntBASIC4.32□□□□□ -1.72
Upk3aQ9JKX8 Gm33594-201ENSMUST00000209502 1333 ntTSL 5 BASIC4.32□□□□□ -1.72
Upk3aQ9JKX8 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Upk3aQ9JKX8 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
Upk3aQ9JKX8 Gm15022-201ENSMUST00000122074 746 ntBASIC4.32□□□□□ -1.72
Upk3aQ9JKX8 Gm12317-201ENSMUST00000122307 319 ntBASIC4.32□□□□□ -1.72
Upk3aQ9JKX8 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC4.32□□□□□ -1.72
Upk3aQ9JKX8 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Upk3aQ9JKX8 Gm26085-201ENSMUST00000157900 116 ntBASIC4.32□□□□□ -1.72
Upk3aQ9JKX8 Gm3077-201ENSMUST00000165903 627 ntBASIC4.32□□□□□ -1.72
Upk3aQ9JKX8 Gm18128-201ENSMUST00000172625 511 ntBASIC4.32□□□□□ -1.72
Upk3aQ9JKX8 Gm27883-201ENSMUST00000183941 102 ntBASIC4.32□□□□□ -1.72
Upk3aQ9JKX8 Mir6410-201ENSMUST00000184204 104 ntBASIC4.32□□□□□ -1.72
Upk3aQ9JKX8 Gm27940-201ENSMUST00000184449 98 ntBASIC4.32□□□□□ -1.72
Upk3aQ9JKX8 Mir6418-201ENSMUST00000185075 115 ntBASIC4.32□□□□□ -1.72
Upk3aQ9JKX8 Gm8939-201ENSMUST00000192577 964 ntBASIC4.32□□□□□ -1.72
Upk3aQ9JKX8 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC4.32□□□□□ -1.72
Upk3aQ9JKX8 Cycs-ps2-201ENSMUST00000197114 292 ntBASIC4.32□□□□□ -1.72
Upk3aQ9JKX8 AC122464.1-201ENSMUST00000202789 770 ntBASIC4.32□□□□□ -1.72
Upk3aQ9JKX8 Gm44389-201ENSMUST00000203795 182 ntBASIC4.32□□□□□ -1.72
Upk3aQ9JKX8 Gm45228-201ENSMUST00000206585 352 ntBASIC4.32□□□□□ -1.72
Upk3aQ9JKX8 Olfr151-201ENSMUST00000211893 1128 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Upk3aQ9JKX8 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Upk3aQ9JKX8 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC4.32□□□□□ -1.72
Upk3aQ9JKX8 AC131720.1-201ENSMUST00000218629 2132 ntBASIC4.32□□□□□ -1.72
Upk3aQ9JKX8 Gm6988-201ENSMUST00000222676 375 ntBASIC4.32□□□□□ -1.72
Upk3aQ9JKX8 AL606513.1-201ENSMUST00000225369 579 ntBASIC4.32□□□□□ -1.72
Upk3aQ9JKX8 Olfr430-201ENSMUST00000055873 954 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Upk3aQ9JKX8 Olfr803-201ENSMUST00000056736 927 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Upk3aQ9JKX8 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
Upk3aQ9JKX8 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Upk3aQ9JKX8 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
Upk3aQ9JKX8 Gm16332-201ENSMUST00000134229 2967 ntBASIC4.32□□□□□ -1.72
Upk3aQ9JKX8 Gm18422-202ENSMUST00000203798 2214 ntBASIC4.31□□□□□ -1.72
Upk3aQ9JKX8 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Upk3aQ9JKX8 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Upk3aQ9JKX8 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
Upk3aQ9JKX8 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
Upk3aQ9JKX8 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Upk3aQ9JKX8 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Upk3aQ9JKX8 Mir105-201ENSMUST00000104655 80 ntBASIC4.31□□□□□ -1.72
Upk3aQ9JKX8 Gm7834-201ENSMUST00000117560 437 ntBASIC4.31□□□□□ -1.72
Upk3aQ9JKX8 Gm15058-201ENSMUST00000117689 458 ntBASIC4.31□□□□□ -1.72
Upk3aQ9JKX8 Gm12328-201ENSMUST00000118611 197 ntBASIC4.31□□□□□ -1.72
Upk3aQ9JKX8 Gm16179-201ENSMUST00000120685 373 ntBASIC4.31□□□□□ -1.72
Upk3aQ9JKX8 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC4.31□□□□□ -1.72
Upk3aQ9JKX8 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
Upk3aQ9JKX8 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Upk3aQ9JKX8 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC4.31□□□□□ -1.72
Upk3aQ9JKX8 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Upk3aQ9JKX8 Olfr367-ps-202ENSMUST00000143957 942 ntBASIC4.31□□□□□ -1.72
Upk3aQ9JKX8 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC4.31□□□□□ -1.72
Upk3aQ9JKX8 Gm22158-201ENSMUST00000158411 126 ntBASIC4.31□□□□□ -1.72
Upk3aQ9JKX8 Gm16134-201ENSMUST00000161714 336 ntBASIC4.31□□□□□ -1.72
Upk3aQ9JKX8 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Upk3aQ9JKX8 Mir3473a-201ENSMUST00000175011 78 ntBASIC4.31□□□□□ -1.72
Upk3aQ9JKX8 Gm23638-201ENSMUST00000175073 126 ntBASIC4.31□□□□□ -1.72
Upk3aQ9JKX8 Gm23158-201ENSMUST00000175076 126 ntBASIC4.31□□□□□ -1.72
Upk3aQ9JKX8 Gm22907-201ENSMUST00000175198 126 ntBASIC4.31□□□□□ -1.72
Upk3aQ9JKX8 Gm22625-201ENSMUST00000175382 126 ntBASIC4.31□□□□□ -1.72
Upk3aQ9JKX8 Gm22875-201ENSMUST00000175449 126 ntBASIC4.31□□□□□ -1.72
Upk3aQ9JKX8 Gm25197-201ENSMUST00000175516 126 ntBASIC4.31□□□□□ -1.72
Upk3aQ9JKX8 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Upk3aQ9JKX8 Gm27857-201ENSMUST00000176930 126 ntBASIC4.31□□□□□ -1.72
Upk3aQ9JKX8 Gm26268-201ENSMUST00000177685 126 ntBASIC4.31□□□□□ -1.72
Upk3aQ9JKX8 Gm23681-201ENSMUST00000178821 126 ntBASIC4.31□□□□□ -1.72
Upk3aQ9JKX8 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC4.31□□□□□ -1.72
Upk3aQ9JKX8 Gm21991-201ENSMUST00000180006 508 ntBASIC4.31□□□□□ -1.72
Upk3aQ9JKX8 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Upk3aQ9JKX8 Gm24949-201ENSMUST00000183609 215 ntBASIC4.31□□□□□ -1.72
Upk3aQ9JKX8 Gm28830-201ENSMUST00000188192 213 ntBASIC4.31□□□□□ -1.72
Upk3aQ9JKX8 Gm18181-201ENSMUST00000190670 736 ntBASIC4.31□□□□□ -1.72
Upk3aQ9JKX8 Gm29527-201ENSMUST00000190722 622 ntTSL 5 BASIC4.31□□□□□ -1.72
Upk3aQ9JKX8 Gm37473-201ENSMUST00000195079 674 ntTSL 5 BASIC4.31□□□□□ -1.72
Upk3aQ9JKX8 Gm43922-201ENSMUST00000205071 328 ntBASIC4.31□□□□□ -1.72
Upk3aQ9JKX8 Gm36633-201ENSMUST00000205873 647 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Upk3aQ9JKX8 Gm18877-201ENSMUST00000207706 539 ntBASIC4.31□□□□□ -1.72
Upk3aQ9JKX8 Gm46190-201ENSMUST00000219650 427 ntBASIC4.31□□□□□ -1.72
Upk3aQ9JKX8 CT030194.2-201ENSMUST00000225752 379 ntBASIC4.31□□□□□ -1.72
Upk3aQ9JKX8 AC154239.2-201ENSMUST00000227859 233 ntBASIC4.31□□□□□ -1.72
Upk3aQ9JKX8 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms