Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 AC154600.1-201ENSMUST00000226480 714 ntBASIC6.4□□□□□ -1.38
Clp1Q99LI9 AC122858.1-202ENSMUST00000228290 986 ntBASIC6.4□□□□□ -1.38
Clp1Q99LI9 Gm22364-201ENSMUST00000083097 98 ntBASIC6.4□□□□□ -1.38
Clp1Q99LI9 Mir134-201ENSMUST00000083492 71 ntBASIC6.4□□□□□ -1.38
Clp1Q99LI9 Gm7676-201ENSMUST00000084055 319 ntBASIC6.4□□□□□ -1.38
Clp1Q99LI9 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Clp1Q99LI9 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Clp1Q99LI9 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
Clp1Q99LI9 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Clp1Q99LI9 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Clp1Q99LI9 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Clp1Q99LI9 Cep192-201ENSMUST00000025425 8093 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Clp1Q99LI9 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Clp1Q99LI9 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
Clp1Q99LI9 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
Clp1Q99LI9 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
Clp1Q99LI9 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Clp1Q99LI9 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Clp1Q99LI9 Zfp568-202ENSMUST00000146074 6867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Clp1Q99LI9 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Clp1Q99LI9 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Clp1Q99LI9 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Clp1Q99LI9 Gm26984-201ENSMUST00000182345 3510 ntBASIC6.39□□□□□ -1.39
Clp1Q99LI9 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Clp1Q99LI9 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Clp1Q99LI9 Olfr488-202ENSMUST00000211508 4624 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
Clp1Q99LI9 Olfr488-203ENSMUST00000215173 4605 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
Clp1Q99LI9 BC080695-201ENSMUST00000105765 2102 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Clp1Q99LI9 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
Clp1Q99LI9 Gm16431-201ENSMUST00000117454 431 ntBASIC6.39□□□□□ -1.39
Clp1Q99LI9 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Clp1Q99LI9 Gm6591-201ENSMUST00000121063 434 ntBASIC6.39□□□□□ -1.39
Clp1Q99LI9 Gm11787-201ENSMUST00000121996 1050 ntBASIC6.39□□□□□ -1.39
Clp1Q99LI9 Gm11254-201ENSMUST00000122368 653 ntBASIC6.39□□□□□ -1.39
Clp1Q99LI9 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
Clp1Q99LI9 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Clp1Q99LI9 Gm22434-201ENSMUST00000158549 122 ntBASIC6.39□□□□□ -1.39
Clp1Q99LI9 Gm22307-201ENSMUST00000180019 107 ntBASIC6.39□□□□□ -1.39
Clp1Q99LI9 Trbv9-201ENSMUST00000194494 290 ntBASIC6.39□□□□□ -1.39
Clp1Q99LI9 Gm43494-201ENSMUST00000197672 388 ntBASIC6.39□□□□□ -1.39
Clp1Q99LI9 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC6.39□□□□□ -1.39
Clp1Q99LI9 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Clp1Q99LI9 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Clp1Q99LI9 Gm45590-201ENSMUST00000209715 262 ntBASIC6.39□□□□□ -1.39
Clp1Q99LI9 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Clp1Q99LI9 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC6.39□□□□□ -1.39
Clp1Q99LI9 Gm46996-201ENSMUST00000220924 408 ntBASIC6.39□□□□□ -1.39
Clp1Q99LI9 AC164164.2-201ENSMUST00000221809 785 ntBASIC6.39□□□□□ -1.39
Clp1Q99LI9 AC126554.2-201ENSMUST00000223259 400 ntBASIC6.39□□□□□ -1.39
Clp1Q99LI9 AC116656.1-201ENSMUST00000227040 755 ntBASIC6.39□□□□□ -1.39
Clp1Q99LI9 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
Clp1Q99LI9 Gm26439-201ENSMUST00000082592 106 ntBASIC6.39□□□□□ -1.39
Clp1Q99LI9 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Clp1Q99LI9 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Clp1Q99LI9 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Clp1Q99LI9 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
Clp1Q99LI9 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Clp1Q99LI9 Gm37630-201ENSMUST00000194210 1456 ntBASIC6.39□□□□□ -1.39
Clp1Q99LI9 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Clp1Q99LI9 Vmn2r118-201ENSMUST00000168440 2562 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Clp1Q99LI9 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Clp1Q99LI9 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Clp1Q99LI9 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Clp1Q99LI9 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Clp1Q99LI9 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Clp1Q99LI9 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC6.39□□□□□ -1.39
Clp1Q99LI9 Gm19113-201ENSMUST00000217552 1828 ntBASIC6.39□□□□□ -1.39
Clp1Q99LI9 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Clp1Q99LI9 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Clp1Q99LI9 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Clp1Q99LI9 Gm20706-201ENSMUST00000175985 2023 ntBASIC6.38□□□□□ -1.39
Clp1Q99LI9 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Clp1Q99LI9 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Clp1Q99LI9 Gm37221-201ENSMUST00000194472 3007 ntBASIC6.38□□□□□ -1.39
Clp1Q99LI9 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Clp1Q99LI9 Gm13770-201ENSMUST00000117149 305 ntBASIC6.38□□□□□ -1.39
Clp1Q99LI9 Gm6427-201ENSMUST00000118721 979 ntBASIC6.38□□□□□ -1.39
Clp1Q99LI9 Gm13627-201ENSMUST00000119700 706 ntBASIC6.38□□□□□ -1.39
Clp1Q99LI9 Gm14655-201ENSMUST00000120124 578 ntBASIC6.38□□□□□ -1.39
Clp1Q99LI9 Gm12293-201ENSMUST00000121898 590 ntBASIC6.38□□□□□ -1.39
Clp1Q99LI9 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC6.38□□□□□ -1.39
Clp1Q99LI9 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC6.38□□□□□ -1.39
Clp1Q99LI9 Gm23583-201ENSMUST00000158533 289 ntBASIC6.38□□□□□ -1.39
Clp1Q99LI9 Gm7335-201ENSMUST00000172475 373 ntBASIC6.38□□□□□ -1.39
Clp1Q99LI9 Gm20480-201ENSMUST00000173953 250 ntBASIC6.38□□□□□ -1.39
Clp1Q99LI9 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Clp1Q99LI9 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Clp1Q99LI9 Mir6986-201ENSMUST00000184483 58 ntBASIC6.38□□□□□ -1.39
Clp1Q99LI9 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC6.38□□□□□ -1.39
Clp1Q99LI9 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Clp1Q99LI9 Igkv2-107-201ENSMUST00000196000 313 ntBASIC6.38□□□□□ -1.39
Clp1Q99LI9 Gm10709-201ENSMUST00000213318 480 ntBASIC6.38□□□□□ -1.39
Clp1Q99LI9 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Clp1Q99LI9 AC124408.2-201ENSMUST00000228168 645 ntBASIC6.38□□□□□ -1.39
Clp1Q99LI9 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Clp1Q99LI9 Gm8412-201ENSMUST00000077493 440 ntBASIC6.38□□□□□ -1.39
Clp1Q99LI9 Olfr1148-201ENSMUST00000077580 945 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Clp1Q99LI9 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC6.38□□□□□ -1.39
Clp1Q99LI9 9930038B18Rik-201ENSMUST00000151816 3966 ntTSL 5 BASIC6.38□□□□□ -1.39
Clp1Q99LI9 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC6.38□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms