Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Nup88Q8CEC0 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC5.45□□□□□ -1.54
Nup88Q8CEC0 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Nup88Q8CEC0 Gm43216-201ENSMUST00000196295 1333 ntBASIC5.45□□□□□ -1.54
Nup88Q8CEC0 Plch1-209ENSMUST00000161052 1472 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Nup88Q8CEC0 Gm37831-201ENSMUST00000191685 1787 ntBASIC5.44□□□□□ -1.54
Nup88Q8CEC0 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Nup88Q8CEC0 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Nup88Q8CEC0 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Nup88Q8CEC0 Gm42843-201ENSMUST00000196328 3616 ntBASIC5.44□□□□□ -1.54
Nup88Q8CEC0 Gm13250-201ENSMUST00000117209 753 ntBASIC5.44□□□□□ -1.54
Nup88Q8CEC0 Gm13755-201ENSMUST00000118509 305 ntBASIC5.44□□□□□ -1.54
Nup88Q8CEC0 Gm11965-201ENSMUST00000122017 277 ntBASIC5.44□□□□□ -1.54
Nup88Q8CEC0 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC5.44□□□□□ -1.54
Nup88Q8CEC0 Gm26347-201ENSMUST00000157526 131 ntBASIC5.44□□□□□ -1.54
Nup88Q8CEC0 Gm15716-201ENSMUST00000162457 404 ntTSL 3 BASIC5.44□□□□□ -1.54
Nup88Q8CEC0 Gm26828-201ENSMUST00000180640 172 ntBASIC5.44□□□□□ -1.54
Nup88Q8CEC0 Gm27286-201ENSMUST00000184934 179 ntBASIC5.44□□□□□ -1.54
Nup88Q8CEC0 Gm21856-201ENSMUST00000187547 696 ntBASIC5.44□□□□□ -1.54
Nup88Q8CEC0 Gm21735-201ENSMUST00000190360 696 ntBASIC5.44□□□□□ -1.54
Nup88Q8CEC0 Gm37272-201ENSMUST00000193401 488 ntBASIC5.44□□□□□ -1.54
Nup88Q8CEC0 Gm37670-201ENSMUST00000193622 229 ntBASIC5.44□□□□□ -1.54
Nup88Q8CEC0 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Nup88Q8CEC0 Gm43005-201ENSMUST00000199015 648 ntBASIC5.44□□□□□ -1.54
Nup88Q8CEC0 Gm42579-201ENSMUST00000200512 734 ntBASIC5.44□□□□□ -1.54
Nup88Q8CEC0 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC5.44□□□□□ -1.54
Nup88Q8CEC0 AC120011.1-201ENSMUST00000202147 744 ntBASIC5.44□□□□□ -1.54
Nup88Q8CEC0 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC5.44□□□□□ -1.54
Nup88Q8CEC0 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Nup88Q8CEC0 Gm2522-201ENSMUST00000204280 322 ntBASIC5.44□□□□□ -1.54
Nup88Q8CEC0 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Nup88Q8CEC0 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC5.44□□□□□ -1.54
Nup88Q8CEC0 Gm45247-201ENSMUST00000210757 309 ntBASIC5.44□□□□□ -1.54
Nup88Q8CEC0 Gm45651-201ENSMUST00000210857 335 ntBASIC5.44□□□□□ -1.54
Nup88Q8CEC0 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Nup88Q8CEC0 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC5.44□□□□□ -1.54
Nup88Q8CEC0 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC5.44□□□□□ -1.54
Nup88Q8CEC0 AC105407.3-201ENSMUST00000224161 648 ntBASIC5.44□□□□□ -1.54
Nup88Q8CEC0 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Nup88Q8CEC0 Olfr1205-201ENSMUST00000076438 924 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Nup88Q8CEC0 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Nup88Q8CEC0 Gm25739-201ENSMUST00000082886 107 ntBASIC5.44□□□□□ -1.54
Nup88Q8CEC0 n-R5s27-201ENSMUST00000093699 119 ntBASIC5.44□□□□□ -1.54
Nup88Q8CEC0 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC5.44□□□□□ -1.54
Nup88Q8CEC0 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
Nup88Q8CEC0 Gm5746-201ENSMUST00000183550 2200 ntBASIC5.44□□□□□ -1.54
Nup88Q8CEC0 AC155805.1-201ENSMUST00000222419 3808 ntBASIC5.44□□□□□ -1.54
Nup88Q8CEC0 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Nup88Q8CEC0 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
Nup88Q8CEC0 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Nup88Q8CEC0 Olfr414-202ENSMUST00000192358 4526 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
Nup88Q8CEC0 Gm37916-201ENSMUST00000192153 2435 ntBASIC5.43□□□□□ -1.54
Nup88Q8CEC0 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
Nup88Q8CEC0 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
Nup88Q8CEC0 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Nup88Q8CEC0 Ube2v2-204ENSMUST00000118236 893 ntTSL 5 BASIC5.43□□□□□ -1.54
Nup88Q8CEC0 Gm9435-201ENSMUST00000120379 877 ntBASIC5.43□□□□□ -1.54
Nup88Q8CEC0 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC5.43□□□□□ -1.54
Nup88Q8CEC0 Gm24444-201ENSMUST00000157244 308 ntBASIC5.43□□□□□ -1.54
Nup88Q8CEC0 Gm22940-201ENSMUST00000158560 155 ntBASIC5.43□□□□□ -1.54
Nup88Q8CEC0 Gm18128-201ENSMUST00000172625 511 ntBASIC5.43□□□□□ -1.54
Nup88Q8CEC0 Gm4842-201ENSMUST00000183237 835 ntBASIC5.43□□□□□ -1.54
Nup88Q8CEC0 Gm4557-201ENSMUST00000185826 907 ntBASIC5.43□□□□□ -1.54
Nup88Q8CEC0 Gm4526-201ENSMUST00000186039 920 ntBASIC5.43□□□□□ -1.54
Nup88Q8CEC0 Gm8708-201ENSMUST00000188500 906 ntBASIC5.43□□□□□ -1.54
Nup88Q8CEC0 Gm17953-201ENSMUST00000192061 667 ntBASIC5.43□□□□□ -1.54
Nup88Q8CEC0 Gm37167-201ENSMUST00000194946 396 ntBASIC5.43□□□□□ -1.54
Nup88Q8CEC0 Gm44138-201ENSMUST00000204939 271 ntBASIC5.43□□□□□ -1.54
Nup88Q8CEC0 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC5.43□□□□□ -1.54
Nup88Q8CEC0 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Nup88Q8CEC0 AC154296.3-201ENSMUST00000214427 712 ntBASIC5.43□□□□□ -1.54
Nup88Q8CEC0 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC5.43□□□□□ -1.54
Nup88Q8CEC0 CU024892.1-201ENSMUST00000224869 515 ntBASIC5.43□□□□□ -1.54
Nup88Q8CEC0 AC154618.1-201ENSMUST00000227451 303 ntBASIC5.43□□□□□ -1.54
Nup88Q8CEC0 Olfr1153-201ENSMUST00000052300 957 ntBASIC5.43□□□□□ -1.54
Nup88Q8CEC0 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Nup88Q8CEC0 Bsph1-201ENSMUST00000098811 822 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
Nup88Q8CEC0 Olfr698-204ENSMUST00000216255 4024 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Nup88Q8CEC0 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Nup88Q8CEC0 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Nup88Q8CEC0 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Nup88Q8CEC0 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Nup88Q8CEC0 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
Nup88Q8CEC0 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Nup88Q8CEC0 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Nup88Q8CEC0 Olfr1176-202ENSMUST00000213778 2823 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Nup88Q8CEC0 Gm12106-201ENSMUST00000116006 1200 ntBASIC5.42□□□□□ -1.54
Nup88Q8CEC0 Gm14790-201ENSMUST00000117760 1293 ntBASIC5.42□□□□□ -1.54
Nup88Q8CEC0 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Nup88Q8CEC0 Gm12224-202ENSMUST00000127107 726 ntTSL 3 BASIC5.42□□□□□ -1.54
Nup88Q8CEC0 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Nup88Q8CEC0 Olfr367-ps-202ENSMUST00000143957 942 ntBASIC5.42□□□□□ -1.54
Nup88Q8CEC0 Gm5258-201ENSMUST00000165437 327 ntBASIC5.42□□□□□ -1.54
Nup88Q8CEC0 Gm22177-201ENSMUST00000175002 158 ntBASIC5.42□□□□□ -1.54
Nup88Q8CEC0 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC5.42□□□□□ -1.54
Nup88Q8CEC0 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Nup88Q8CEC0 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC5.42□□□□□ -1.54
Nup88Q8CEC0 Gm43151-201ENSMUST00000201093 657 ntTSL 3 BASIC5.42□□□□□ -1.54
Nup88Q8CEC0 Gm17811-201ENSMUST00000206193 387 ntBASIC5.42□□□□□ -1.54
Nup88Q8CEC0 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms