Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC3.86□□□□□ -1.79
Col6a6Q8C6K9 Gm42494-201ENSMUST00000196515 3051 ntBASIC3.86□□□□□ -1.79
Col6a6Q8C6K9 Amd2-201ENSMUST00000080898 3218 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Col6a6Q8C6K9 Gm26655-203ENSMUST00000181095 2078 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Col6a6Q8C6K9 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Col6a6Q8C6K9 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Col6a6Q8C6K9 Gm26650-204ENSMUST00000181881 2078 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Col6a6Q8C6K9 AC174797.3-203ENSMUST00000225749 2078 ntBASIC3.86□□□□□ -1.79
Col6a6Q8C6K9 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
Col6a6Q8C6K9 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
Col6a6Q8C6K9 Gm37268-201ENSMUST00000192254 2614 ntBASIC3.86□□□□□ -1.79
Col6a6Q8C6K9 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Col6a6Q8C6K9 Gm25833-201ENSMUST00000104137 133 ntBASIC3.86□□□□□ -1.79
Col6a6Q8C6K9 Gm24553-201ENSMUST00000158653 131 ntBASIC3.86□□□□□ -1.79
Col6a6Q8C6K9 Mir1251-201ENSMUST00000175486 84 ntBASIC3.86□□□□□ -1.79
Col6a6Q8C6K9 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Col6a6Q8C6K9 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Col6a6Q8C6K9 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC3.86□□□□□ -1.79
Col6a6Q8C6K9 Gm8919-201ENSMUST00000182028 1014 ntBASIC3.86□□□□□ -1.79
Col6a6Q8C6K9 Gm4410-201ENSMUST00000199349 686 ntBASIC3.86□□□□□ -1.79
Col6a6Q8C6K9 Gm18482-201ENSMUST00000202405 760 ntBASIC3.86□□□□□ -1.79
Col6a6Q8C6K9 Gm8820-201ENSMUST00000204077 571 ntBASIC3.86□□□□□ -1.79
Col6a6Q8C6K9 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC3.86□□□□□ -1.79
Col6a6Q8C6K9 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC3.86□□□□□ -1.79
Col6a6Q8C6K9 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
Col6a6Q8C6K9 AC139638.1-201ENSMUST00000218027 364 ntBASIC3.86□□□□□ -1.79
Col6a6Q8C6K9 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Col6a6Q8C6K9 Olfr482-201ENSMUST00000081184 972 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Col6a6Q8C6K9 Snora30-201ENSMUST00000083325 130 ntBASIC3.86□□□□□ -1.79
Col6a6Q8C6K9 Gm14308-203ENSMUST00000119149 1458 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Col6a6Q8C6K9 Gm14434-202ENSMUST00000120959 1458 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Col6a6Q8C6K9 BC051142-201ENSMUST00000078615 1899 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
Col6a6Q8C6K9 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC3.86□□□□□ -1.79
Col6a6Q8C6K9 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
Col6a6Q8C6K9 Olfr341-202ENSMUST00000213300 6634 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Col6a6Q8C6K9 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Col6a6Q8C6K9 Gm12379-201ENSMUST00000119607 391 ntBASIC3.86□□□□□ -1.79
Col6a6Q8C6K9 Defa-ps5-201ENSMUST00000121541 279 ntBASIC3.86□□□□□ -1.79
Col6a6Q8C6K9 Gm25104-201ENSMUST00000122476 163 ntBASIC3.86□□□□□ -1.79
Col6a6Q8C6K9 Gm22816-201ENSMUST00000157450 117 ntBASIC3.86□□□□□ -1.79
Col6a6Q8C6K9 Gm25977-201ENSMUST00000158697 85 ntBASIC3.86□□□□□ -1.79
Col6a6Q8C6K9 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC3.86□□□□□ -1.79
Col6a6Q8C6K9 Gm5974-201ENSMUST00000181607 986 ntBASIC3.86□□□□□ -1.79
Col6a6Q8C6K9 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Col6a6Q8C6K9 Gm37700-201ENSMUST00000192617 965 ntBASIC3.86□□□□□ -1.79
Col6a6Q8C6K9 Gm37614-201ENSMUST00000195645 210 ntBASIC3.86□□□□□ -1.79
Col6a6Q8C6K9 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Col6a6Q8C6K9 AC164883.9-201ENSMUST00000228042 399 ntBASIC3.86□□□□□ -1.79
Col6a6Q8C6K9 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Col6a6Q8C6K9 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Col6a6Q8C6K9 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
Col6a6Q8C6K9 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Col6a6Q8C6K9 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC3.85□□□□□ -1.79
Col6a6Q8C6K9 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Col6a6Q8C6K9 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Col6a6Q8C6K9 Clec2i-203ENSMUST00000159866 2330 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
Col6a6Q8C6K9 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
Col6a6Q8C6K9 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Col6a6Q8C6K9 Olfr646-202ENSMUST00000214099 3778 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Col6a6Q8C6K9 Gm15128-202ENSMUST00000178833 1350 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Col6a6Q8C6K9 Gm12719-201ENSMUST00000118859 241 ntBASIC3.85□□□□□ -1.79
Col6a6Q8C6K9 Gm13902-201ENSMUST00000120168 605 ntBASIC3.85□□□□□ -1.79
Col6a6Q8C6K9 Gm18828-202ENSMUST00000181035 310 ntBASIC3.85□□□□□ -1.79
Col6a6Q8C6K9 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC3.85□□□□□ -1.79
Col6a6Q8C6K9 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC3.85□□□□□ -1.79
Col6a6Q8C6K9 Gm45553-201ENSMUST00000209929 507 ntBASIC3.85□□□□□ -1.79
Col6a6Q8C6K9 Gm7380-201ENSMUST00000211599 466 ntBASIC3.85□□□□□ -1.79
Col6a6Q8C6K9 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC3.85□□□□□ -1.79
Col6a6Q8C6K9 AC091783.5-201ENSMUST00000224928 671 ntBASIC3.85□□□□□ -1.79
Col6a6Q8C6K9 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Col6a6Q8C6K9 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC3.85□□□□□ -1.79
Col6a6Q8C6K9 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Col6a6Q8C6K9 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Col6a6Q8C6K9 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC3.85□□□□□ -1.79
Col6a6Q8C6K9 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
Col6a6Q8C6K9 Gm37558-201ENSMUST00000193684 2983 ntBASIC3.85□□□□□ -1.79
Col6a6Q8C6K9 Gm15151-201ENSMUST00000117106 177 ntBASIC3.84□□□□□ -1.79
Col6a6Q8C6K9 Gm11829-201ENSMUST00000121003 282 ntBASIC3.84□□□□□ -1.79
Col6a6Q8C6K9 Gm22514-201ENSMUST00000122547 308 ntBASIC3.84□□□□□ -1.79
Col6a6Q8C6K9 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Col6a6Q8C6K9 Gm25066-201ENSMUST00000158145 123 ntBASIC3.84□□□□□ -1.79
Col6a6Q8C6K9 Gm2862-201ENSMUST00000161524 328 ntBASIC3.84□□□□□ -1.79
Col6a6Q8C6K9 Gm16545-201ENSMUST00000161968 463 ntBASIC3.84□□□□□ -1.79
Col6a6Q8C6K9 Gm37491-201ENSMUST00000192552 1111 ntBASIC3.84□□□□□ -1.79
Col6a6Q8C6K9 Gm37239-201ENSMUST00000193510 141 ntBASIC3.84□□□□□ -1.79
Col6a6Q8C6K9 Gnrh1-202ENSMUST00000223929 428 ntBASIC3.84□□□□□ -1.79
Col6a6Q8C6K9 Reg3g-201ENSMUST00000032089 771 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Col6a6Q8C6K9 Gm7099-201ENSMUST00000080066 554 ntBASIC3.84□□□□□ -1.79
Col6a6Q8C6K9 Vmn1r183-201ENSMUST00000086012 918 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Col6a6Q8C6K9 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.79
Col6a6Q8C6K9 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC3.84□□□□□ -1.79
Col6a6Q8C6K9 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Col6a6Q8C6K9 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Col6a6Q8C6K9 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC3.84□□□□□ -1.79
Col6a6Q8C6K9 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Col6a6Q8C6K9 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Col6a6Q8C6K9 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Col6a6Q8C6K9 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Col6a6Q8C6K9 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
Col6a6Q8C6K9 AC159193.2-201ENSMUST00000220865 4251 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms