Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm18120-201ENSMUST00000220079 511 ntBASIC6.86□□□□□ -1.31
Trim47Q8C0E3 Gm8231-201ENSMUST00000221617 783 ntBASIC6.86□□□□□ -1.31
Trim47Q8C0E3 Gm33312-201ENSMUST00000222443 332 ntBASIC6.86□□□□□ -1.31
Trim47Q8C0E3 AC154527.1-201ENSMUST00000225809 242 ntBASIC6.86□□□□□ -1.31
Trim47Q8C0E3 AC154657.1-201ENSMUST00000226394 775 ntBASIC6.86□□□□□ -1.31
Trim47Q8C0E3 AC164315.1-201ENSMUST00000226452 708 ntBASIC6.86□□□□□ -1.31
Trim47Q8C0E3 AC126690.1-201ENSMUST00000228898 397 ntBASIC6.86□□□□□ -1.31
Trim47Q8C0E3 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Trim47Q8C0E3 Gm26176-201ENSMUST00000083795 105 ntBASIC6.86□□□□□ -1.31
Trim47Q8C0E3 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Trim47Q8C0E3 Olfr678-201ENSMUST00000098160 942 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Trim47Q8C0E3 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC6.86□□□□□ -1.31
Trim47Q8C0E3 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
Trim47Q8C0E3 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC6.86□□□□□ -1.31
Trim47Q8C0E3 Gm43425-201ENSMUST00000201793 3291 ntBASIC6.86□□□□□ -1.31
Trim47Q8C0E3 Serpinb5-201ENSMUST00000086701 2572 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Trim47Q8C0E3 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC6.86□□□□□ -1.31
Trim47Q8C0E3 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Trim47Q8C0E3 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Trim47Q8C0E3 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Trim47Q8C0E3 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC6.86□□□□□ -1.31
Trim47Q8C0E3 Gm37470-201ENSMUST00000193378 2798 ntBASIC6.86□□□□□ -1.31
Trim47Q8C0E3 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Trim47Q8C0E3 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Trim47Q8C0E3 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Trim47Q8C0E3 Gm5373-202ENSMUST00000212931 2964 ntTSL 2 BASIC6.85□□□□□ -1.31
Trim47Q8C0E3 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Trim47Q8C0E3 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC6.85□□□□□ -1.31
Trim47Q8C0E3 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Trim47Q8C0E3 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Trim47Q8C0E3 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Trim47Q8C0E3 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Trim47Q8C0E3 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Trim47Q8C0E3 E430021H15Rik-201ENSMUST00000198875 3459 ntBASIC6.85□□□□□ -1.31
Trim47Q8C0E3 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Trim47Q8C0E3 Gm13193-201ENSMUST00000117275 225 ntBASIC6.85□□□□□ -1.31
Trim47Q8C0E3 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC6.85□□□□□ -1.31
Trim47Q8C0E3 Gm11936-201ENSMUST00000118323 160 ntBASIC6.85□□□□□ -1.31
Trim47Q8C0E3 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC6.85□□□□□ -1.31
Trim47Q8C0E3 Gm25185-201ENSMUST00000157754 96 ntBASIC6.85□□□□□ -1.31
Trim47Q8C0E3 Gm24687-201ENSMUST00000157758 241 ntBASIC6.85□□□□□ -1.31
Trim47Q8C0E3 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Trim47Q8C0E3 Gm16557-201ENSMUST00000159182 191 ntBASIC6.85□□□□□ -1.31
Trim47Q8C0E3 Gm4854-201ENSMUST00000185902 574 ntBASIC6.85□□□□□ -1.31
Trim47Q8C0E3 Gm29201-201ENSMUST00000189120 431 ntBASIC6.85□□□□□ -1.31
Trim47Q8C0E3 Gm37758-201ENSMUST00000194275 629 ntBASIC6.85□□□□□ -1.31
Trim47Q8C0E3 Gm38167-201ENSMUST00000195704 1178 ntBASIC6.85□□□□□ -1.31
Trim47Q8C0E3 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC6.85□□□□□ -1.31
Trim47Q8C0E3 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC6.85□□□□□ -1.31
Trim47Q8C0E3 Gm45724-201ENSMUST00000213031 420 ntBASIC6.85□□□□□ -1.31
Trim47Q8C0E3 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC6.85□□□□□ -1.31
Trim47Q8C0E3 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC6.85□□□□□ -1.31
Trim47Q8C0E3 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Trim47Q8C0E3 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Trim47Q8C0E3 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC6.85□□□□□ -1.31
Trim47Q8C0E3 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC6.85□□□□□ -1.31
Trim47Q8C0E3 AC154510.1-201ENSMUST00000223925 737 ntBASIC6.85□□□□□ -1.31
Trim47Q8C0E3 Gm22997-201ENSMUST00000082845 107 ntBASIC6.85□□□□□ -1.31
Trim47Q8C0E3 Mir412-201ENSMUST00000083636 80 ntBASIC6.85□□□□□ -1.31
Trim47Q8C0E3 Gm6177-201ENSMUST00000085589 465 ntBASIC6.85□□□□□ -1.31
Trim47Q8C0E3 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Trim47Q8C0E3 Gm37621-201ENSMUST00000194716 5531 ntBASIC6.85□□□□□ -1.31
Trim47Q8C0E3 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Trim47Q8C0E3 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC6.85□□□□□ -1.31
Trim47Q8C0E3 Hsf2-201ENSMUST00000079833 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Trim47Q8C0E3 Zfand6-202ENSMUST00000178385 1538 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Trim47Q8C0E3 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Trim47Q8C0E3 Gm18796-201ENSMUST00000190440 1767 ntBASIC6.85□□□□□ -1.31
Trim47Q8C0E3 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Trim47Q8C0E3 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC6.85□□□□□ -1.31
Trim47Q8C0E3 Gm43496-201ENSMUST00000201682 3001 ntBASIC6.84□□□□□ -1.31
Trim47Q8C0E3 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Trim47Q8C0E3 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Trim47Q8C0E3 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
Trim47Q8C0E3 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Trim47Q8C0E3 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Trim47Q8C0E3 AC166358.5-201ENSMUST00000220706 1302 ntBASIC6.84□□□□□ -1.31
Trim47Q8C0E3 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Trim47Q8C0E3 AC154642.2-201ENSMUST00000223657 2485 ntBASIC6.84□□□□□ -1.31
Trim47Q8C0E3 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
Trim47Q8C0E3 Gm5832-201ENSMUST00000121704 1582 ntBASIC6.84□□□□□ -1.31
Trim47Q8C0E3 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Trim47Q8C0E3 C87499-202ENSMUST00000107142 672 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
Trim47Q8C0E3 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC6.84□□□□□ -1.31
Trim47Q8C0E3 Gm15078-201ENSMUST00000118371 782 ntBASIC6.84□□□□□ -1.31
Trim47Q8C0E3 Gm14652-201ENSMUST00000118479 235 ntBASIC6.84□□□□□ -1.31
Trim47Q8C0E3 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Trim47Q8C0E3 Gm12115-201ENSMUST00000119969 447 ntBASIC6.84□□□□□ -1.31
Trim47Q8C0E3 Gm12618-201ENSMUST00000121754 483 ntBASIC6.84□□□□□ -1.31
Trim47Q8C0E3 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC6.84□□□□□ -1.31
Trim47Q8C0E3 Gm25718-201ENSMUST00000158632 118 ntBASIC6.84□□□□□ -1.31
Trim47Q8C0E3 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC6.84□□□□□ -1.31
Trim47Q8C0E3 Gm22655-201ENSMUST00000174949 96 ntBASIC6.84□□□□□ -1.31
Trim47Q8C0E3 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Trim47Q8C0E3 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Trim47Q8C0E3 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
Trim47Q8C0E3 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
Trim47Q8C0E3 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
Trim47Q8C0E3 Gm28973-201ENSMUST00000189310 613 ntBASIC6.84□□□□□ -1.31
Trim47Q8C0E3 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 104 ms