Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm3091-201ENSMUST00000163408 484 ntBASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Gm10074-201ENSMUST00000174543 249 ntBASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Gm23568-201ENSMUST00000177960 92 ntBASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Gm24829-201ENSMUST00000179245 92 ntBASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Mir7653-201ENSMUST00000184358 61 ntBASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Mir7674-201ENSMUST00000184964 63 ntBASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Gm28973-201ENSMUST00000189310 613 ntBASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Gm36998-201ENSMUST00000193205 704 ntBASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Gm45473-201ENSMUST00000211452 616 ntBASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 CT485607.3-201ENSMUST00000213361 672 ntBASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Gm20734-201ENSMUST00000216939 193 ntBASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 AC138667.2-201ENSMUST00000224880 598 ntBASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 AC122459.2-201ENSMUST00000227099 638 ntBASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 AC170810.1-201ENSMUST00000228267 672 ntBASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Mir298-201ENSMUST00000083476 82 ntBASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Gm6215-201ENSMUST00000119297 1386 ntBASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Gm7905-201ENSMUST00000119933 1386 ntBASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Gm6207-201ENSMUST00000120075 1386 ntBASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Gm6228-201ENSMUST00000178856 1386 ntBASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Gm6221-201ENSMUST00000180064 1386 ntBASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Gm28432-201ENSMUST00000185237 1499 ntTSL 5 BASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Gm29662-201ENSMUST00000185620 1499 ntTSL 5 BASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Gm29565-202ENSMUST00000186260 1499 ntTSL 5 BASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Gm29393-201ENSMUST00000187002 1499 ntTSL 5 BASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Gm28260-201ENSMUST00000187337 1499 ntTSL 5 BASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Gm29569-202ENSMUST00000187955 1499 ntTSL 5 BASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Gm29625-201ENSMUST00000188079 1499 ntTSL 5 BASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Gm29190-201ENSMUST00000188255 1499 ntTSL 5 BASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Gm28197-203ENSMUST00000188434 1499 ntTSL 5 BASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Gm28545-201ENSMUST00000188667 1499 ntTSL 5 BASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Gm28606-201ENSMUST00000188938 1499 ntTSL 5 BASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Gm29338-201ENSMUST00000189318 1499 ntTSL 5 BASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Gm29425-202ENSMUST00000189421 1499 ntTSL 5 BASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Gm29271-203ENSMUST00000189943 1499 ntTSL 1 (best) BASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Gm28318-203ENSMUST00000190347 1499 ntTSL 5 BASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Gm29182-202ENSMUST00000191008 1499 ntTSL 5 BASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Gm32114-203ENSMUST00000195759 1499 ntTSL 5 BASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 CT025604.1-201ENSMUST00000221111 3436 ntBASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Sh3rf1Q69ZI1 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Sh3rf1Q69ZI1 Olfr1000-202ENSMUST00000213837 1915 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
Sh3rf1Q69ZI1 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC5.99□□□□□ -1.45
Sh3rf1Q69ZI1 Gm38118-201ENSMUST00000192052 2222 ntBASIC5.99□□□□□ -1.45
Sh3rf1Q69ZI1 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Sh3rf1Q69ZI1 CT009480.3-201ENSMUST00000224051 3032 ntBASIC5.99□□□□□ -1.45
Sh3rf1Q69ZI1 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Sh3rf1Q69ZI1 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Sh3rf1Q69ZI1 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Sh3rf1Q69ZI1 Gm37880-201ENSMUST00000192216 3257 ntBASIC5.99□□□□□ -1.45
Sh3rf1Q69ZI1 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC5.99□□□□□ -1.45
Sh3rf1Q69ZI1 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Sh3rf1Q69ZI1 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Sh3rf1Q69ZI1 Gm43025-201ENSMUST00000201764 1886 ntBASIC5.99□□□□□ -1.45
Sh3rf1Q69ZI1 AC120375.2-201ENSMUST00000226532 1853 ntBASIC5.99□□□□□ -1.45
Sh3rf1Q69ZI1 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
Sh3rf1Q69ZI1 Gm23440-201ENSMUST00000104299 130 ntBASIC5.99□□□□□ -1.45
Sh3rf1Q69ZI1 Gm14909-201ENSMUST00000117853 351 ntBASIC5.99□□□□□ -1.45
Sh3rf1Q69ZI1 Gm12442-201ENSMUST00000118372 338 ntBASIC5.99□□□□□ -1.45
Sh3rf1Q69ZI1 Gm12803-201ENSMUST00000118907 821 ntBASIC5.99□□□□□ -1.45
Sh3rf1Q69ZI1 Gm13818-201ENSMUST00000119441 511 ntBASIC5.99□□□□□ -1.45
Sh3rf1Q69ZI1 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC5.99□□□□□ -1.45
Sh3rf1Q69ZI1 Gm11759-201ENSMUST00000121742 464 ntBASIC5.99□□□□□ -1.45
Sh3rf1Q69ZI1 Gm14162-201ENSMUST00000121985 601 ntBASIC5.99□□□□□ -1.45
Sh3rf1Q69ZI1 Gm5924-201ENSMUST00000132554 871 ntBASIC5.99□□□□□ -1.45
Sh3rf1Q69ZI1 Gm26349-201ENSMUST00000157530 130 ntBASIC5.99□□□□□ -1.45
Sh3rf1Q69ZI1 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
Sh3rf1Q69ZI1 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Sh3rf1Q69ZI1 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Sh3rf1Q69ZI1 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Sh3rf1Q69ZI1 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Sh3rf1Q69ZI1 Gm27428-201ENSMUST00000184289 110 ntBASIC5.99□□□□□ -1.45
Sh3rf1Q69ZI1 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC5.99□□□□□ -1.45
Sh3rf1Q69ZI1 1700084F23Rik-205ENSMUST00000191362 743 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Sh3rf1Q69ZI1 Gm7626-201ENSMUST00000195801 353 ntBASIC5.99□□□□□ -1.45
Sh3rf1Q69ZI1 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC5.99□□□□□ -1.45
Sh3rf1Q69ZI1 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC5.99□□□□□ -1.45
Sh3rf1Q69ZI1 Gm45127-201ENSMUST00000205984 1015 ntBASIC5.99□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms