Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm37632-201ENSMUST00000191811 1142 ntBASIC6.31□□□□□ -1.4
Trim28Q62318 Gm37961-201ENSMUST00000192729 299 ntBASIC6.31□□□□□ -1.4
Trim28Q62318 Gm7897-201ENSMUST00000193981 554 ntBASIC6.31□□□□□ -1.4
Trim28Q62318 Fbxw27-201ENSMUST00000197125 810 ntAPPRIS P2 TSL 3 BASIC6.31□□□□□ -1.4
Trim28Q62318 Gm43659-201ENSMUST00000200894 628 ntBASIC6.31□□□□□ -1.4
Trim28Q62318 Gm38825-201ENSMUST00000204022 648 ntTSL 5 BASIC6.31□□□□□ -1.4
Trim28Q62318 Gm44006-201ENSMUST00000204273 396 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Trim28Q62318 Gm19170-201ENSMUST00000212440 1084 ntBASIC6.31□□□□□ -1.4
Trim28Q62318 AC166902.1-201ENSMUST00000216653 517 ntBASIC6.31□□□□□ -1.4
Trim28Q62318 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Trim28Q62318 CT025689.2-201ENSMUST00000224979 429 ntBASIC6.31□□□□□ -1.4
Trim28Q62318 AC165437.1-201ENSMUST00000228640 536 ntBASIC6.31□□□□□ -1.4
Trim28Q62318 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Trim28Q62318 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Trim28Q62318 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Trim28Q62318 Gm23300-201ENSMUST00000082712 125 ntBASIC6.31□□□□□ -1.4
Trim28Q62318 Gm25140-201ENSMUST00000083254 140 ntBASIC6.31□□□□□ -1.4
Trim28Q62318 Gm8979-201ENSMUST00000183386 7296 ntBASIC6.31□□□□□ -1.4
Trim28Q62318 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC6.31□□□□□ -1.4
Trim28Q62318 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Trim28Q62318 Gm3962-201ENSMUST00000173027 2587 ntBASIC6.31□□□□□ -1.4
Trim28Q62318 Olfr1065-204ENSMUST00000217586 2174 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Trim28Q62318 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Trim28Q62318 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Trim28Q62318 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Trim28Q62318 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
Trim28Q62318 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC6.3□□□□□ -1.4
Trim28Q62318 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trim28Q62318 Gm37749-201ENSMUST00000193917 1899 ntBASIC6.3□□□□□ -1.4
Trim28Q62318 Olfr133-203ENSMUST00000215078 3130 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Trim28Q62318 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC6.3□□□□□ -1.4
Trim28Q62318 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trim28Q62318 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Trim28Q62318 Olfr671-202ENSMUST00000210963 3157 ntTSL 5 BASIC6.3□□□□□ -1.4
Trim28Q62318 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Trim28Q62318 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC6.3□□□□□ -1.4
Trim28Q62318 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Trim28Q62318 Gm12520-201ENSMUST00000117493 316 ntBASIC6.3□□□□□ -1.4
Trim28Q62318 Gm13491-201ENSMUST00000118267 235 ntBASIC6.3□□□□□ -1.4
Trim28Q62318 Gm11407-201ENSMUST00000120362 1058 ntBASIC6.3□□□□□ -1.4
Trim28Q62318 Gm13808-201ENSMUST00000121353 184 ntBASIC6.3□□□□□ -1.4
Trim28Q62318 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC6.3□□□□□ -1.4
Trim28Q62318 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Trim28Q62318 Mir1947-201ENSMUST00000158235 85 ntBASIC6.3□□□□□ -1.4
Trim28Q62318 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC6.3□□□□□ -1.4
Trim28Q62318 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trim28Q62318 Gm17152-201ENSMUST00000172430 535 ntBASIC6.3□□□□□ -1.4
Trim28Q62318 Mir7022-201ENSMUST00000183749 61 ntBASIC6.3□□□□□ -1.4
Trim28Q62318 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Trim28Q62318 Gm5734-201ENSMUST00000189787 913 ntBASIC6.3□□□□□ -1.4
Trim28Q62318 Gm9238-201ENSMUST00000196181 329 ntBASIC6.3□□□□□ -1.4
Trim28Q62318 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC6.3□□□□□ -1.4
Trim28Q62318 AC164618.1-201ENSMUST00000225769 592 ntBASIC6.3□□□□□ -1.4
Trim28Q62318 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trim28Q62318 Olfr205-201ENSMUST00000074125 990 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Trim28Q62318 Olfr493-201ENSMUST00000080106 945 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Trim28Q62318 Olfr1321-201ENSMUST00000088876 1056 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Trim28Q62318 Olfr338-202ENSMUST00000091006 921 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Trim28Q62318 Gm3182-201ENSMUST00000167902 1753 ntAPPRIS P5 TSL 5 BASIC6.3□□□□□ -1.4
Trim28Q62318 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Trim28Q62318 B930086L07Rik-201ENSMUST00000209529 3738 ntBASIC6.3□□□□□ -1.4
Trim28Q62318 Gm15128-202ENSMUST00000178833 1350 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Trim28Q62318 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trim28Q62318 Olfr799-203ENSMUST00000214182 1694 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Trim28Q62318 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim28Q62318 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Trim28Q62318 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim28Q62318 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Trim28Q62318 Mir292-201ENSMUST00000104847 82 ntBASIC6.29□□□□□ -1.4
Trim28Q62318 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC6.29□□□□□ -1.4
Trim28Q62318 Gm25315-201ENSMUST00000116823 121 ntBASIC6.29□□□□□ -1.4
Trim28Q62318 Tcea1-ps1-201ENSMUST00000117942 904 ntBASIC6.29□□□□□ -1.4
Trim28Q62318 Gm13815-201ENSMUST00000119963 412 ntBASIC6.29□□□□□ -1.4
Trim28Q62318 Gm12222-201ENSMUST00000121368 260 ntBASIC6.29□□□□□ -1.4
Trim28Q62318 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trim28Q62318 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trim28Q62318 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trim28Q62318 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC6.29□□□□□ -1.4
Trim28Q62318 Gm25665-201ENSMUST00000157695 110 ntBASIC6.29□□□□□ -1.4
Trim28Q62318 Gm24751-201ENSMUST00000157844 102 ntBASIC6.29□□□□□ -1.4
Trim28Q62318 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC6.29□□□□□ -1.4
Trim28Q62318 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trim28Q62318 Gm43884-201ENSMUST00000204251 559 ntBASIC6.29□□□□□ -1.4
Trim28Q62318 Gng12-208ENSMUST00000204511 739 ntTSL 5 BASIC6.29□□□□□ -1.4
Trim28Q62318 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC6.29□□□□□ -1.4
Trim28Q62318 Gm44961-201ENSMUST00000207450 196 ntBASIC6.29□□□□□ -1.4
Trim28Q62318 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC6.29□□□□□ -1.4
Trim28Q62318 Gm18414-201ENSMUST00000210858 694 ntBASIC6.29□□□□□ -1.4
Trim28Q62318 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC6.29□□□□□ -1.4
Trim28Q62318 Gm5176-201ENSMUST00000218244 1227 ntBASIC6.29□□□□□ -1.4
Trim28Q62318 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC6.29□□□□□ -1.4
Trim28Q62318 AC123534.1-201ENSMUST00000224060 656 ntBASIC6.29□□□□□ -1.4
Trim28Q62318 AC139758.1-201ENSMUST00000226573 930 ntBASIC6.29□□□□□ -1.4
Trim28Q62318 Serpinb3d-201ENSMUST00000023861 1216 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim28Q62318 Olfr459-201ENSMUST00000050412 1109 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Trim28Q62318 Olfr1444-201ENSMUST00000059675 1129 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Trim28Q62318 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Trim28Q62318 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Trim28Q62318 Olfr877-201ENSMUST00000086063 936 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Trim28Q62318 Bsph1-201ENSMUST00000098811 822 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 128.7 ms