Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Upf3bQ3ULL6 Gm27564-201ENSMUST00000185196 96 ntBASIC4.73□□□□□ -1.65
Upf3bQ3ULL6 Gm18117-201ENSMUST00000187720 742 ntBASIC4.73□□□□□ -1.65
Upf3bQ3ULL6 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Upf3bQ3ULL6 Gm5288-201ENSMUST00000198323 1119 ntBASIC4.73□□□□□ -1.65
Upf3bQ3ULL6 Gm18877-201ENSMUST00000207706 539 ntBASIC4.73□□□□□ -1.65
Upf3bQ3ULL6 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC4.73□□□□□ -1.65
Upf3bQ3ULL6 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC4.73□□□□□ -1.65
Upf3bQ3ULL6 CT025552.2-201ENSMUST00000225497 317 ntBASIC4.73□□□□□ -1.65
Upf3bQ3ULL6 AC154626.1-201ENSMUST00000226070 311 ntBASIC4.73□□□□□ -1.65
Upf3bQ3ULL6 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Upf3bQ3ULL6 Evi2-202ENSMUST00000170422 3944 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Upf3bQ3ULL6 Gm45235-201ENSMUST00000208016 4465 ntBASIC4.73□□□□□ -1.65
Upf3bQ3ULL6 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Upf3bQ3ULL6 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Upf3bQ3ULL6 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Upf3bQ3ULL6 Gm5746-201ENSMUST00000183550 2200 ntBASIC4.73□□□□□ -1.65
Upf3bQ3ULL6 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Upf3bQ3ULL6 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Upf3bQ3ULL6 Olfr391-ps-201ENSMUST00000214485 2080 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
Upf3bQ3ULL6 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC4.72□□□□□ -1.65
Upf3bQ3ULL6 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
Upf3bQ3ULL6 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC4.72□□□□□ -1.65
Upf3bQ3ULL6 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Upf3bQ3ULL6 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Upf3bQ3ULL6 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Upf3bQ3ULL6 Olfr1037-202ENSMUST00000213333 1610 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Upf3bQ3ULL6 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Upf3bQ3ULL6 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC4.72□□□□□ -1.65
Upf3bQ3ULL6 Gm7834-201ENSMUST00000117560 437 ntBASIC4.72□□□□□ -1.65
Upf3bQ3ULL6 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC4.72□□□□□ -1.65
Upf3bQ3ULL6 Gm12988-201ENSMUST00000119054 478 ntBASIC4.72□□□□□ -1.65
Upf3bQ3ULL6 Gm16420-201ENSMUST00000120258 856 ntBASIC4.72□□□□□ -1.65
Upf3bQ3ULL6 Gm11255-201ENSMUST00000120448 1180 ntBASIC4.72□□□□□ -1.65
Upf3bQ3ULL6 Gm12978-201ENSMUST00000121250 522 ntBASIC4.72□□□□□ -1.65
Upf3bQ3ULL6 Gm6027-201ENSMUST00000121467 756 ntBASIC4.72□□□□□ -1.65
Upf3bQ3ULL6 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC4.72□□□□□ -1.65
Upf3bQ3ULL6 Gm10059-201ENSMUST00000131139 171 ntBASIC4.72□□□□□ -1.65
Upf3bQ3ULL6 Gm14505-201ENSMUST00000145383 831 ntTSL 3 BASIC4.72□□□□□ -1.65
Upf3bQ3ULL6 Gm23501-201ENSMUST00000157744 256 ntBASIC4.72□□□□□ -1.65
Upf3bQ3ULL6 Gm25447-201ENSMUST00000158997 128 ntBASIC4.72□□□□□ -1.65
Upf3bQ3ULL6 Gm3091-201ENSMUST00000163408 484 ntBASIC4.72□□□□□ -1.65
Upf3bQ3ULL6 Olfr723-201ENSMUST00000164157 1006 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Upf3bQ3ULL6 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Upf3bQ3ULL6 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
Upf3bQ3ULL6 1700016P04Rik-201ENSMUST00000186770 429 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Upf3bQ3ULL6 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC4.72□□□□□ -1.65
Upf3bQ3ULL6 Cycs-ps2-201ENSMUST00000197114 292 ntBASIC4.72□□□□□ -1.65
Upf3bQ3ULL6 Olfr723-202ENSMUST00000206058 1078 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
Upf3bQ3ULL6 Gm44993-201ENSMUST00000208435 842 ntTSL 3 BASIC4.72□□□□□ -1.65
Upf3bQ3ULL6 Gm21112-201ENSMUST00000212224 578 ntBASIC4.72□□□□□ -1.65
Upf3bQ3ULL6 Gm7760-201ENSMUST00000212265 578 ntBASIC4.72□□□□□ -1.65
Upf3bQ3ULL6 Gm7807-201ENSMUST00000212475 578 ntBASIC4.72□□□□□ -1.65
Upf3bQ3ULL6 CT030124.1-201ENSMUST00000217130 235 ntBASIC4.72□□□□□ -1.65
Upf3bQ3ULL6 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC4.72□□□□□ -1.65
Upf3bQ3ULL6 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC4.72□□□□□ -1.65
Upf3bQ3ULL6 AC153370.1-201ENSMUST00000220296 635 ntTSL 5 BASIC4.72□□□□□ -1.65
Upf3bQ3ULL6 Gm9616-201ENSMUST00000221154 781 ntBASIC4.72□□□□□ -1.65
Upf3bQ3ULL6 AL606513.1-201ENSMUST00000225369 579 ntBASIC4.72□□□□□ -1.65
Upf3bQ3ULL6 AC154239.2-201ENSMUST00000227859 233 ntBASIC4.72□□□□□ -1.65
Upf3bQ3ULL6 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Upf3bQ3ULL6 Meig1-201ENSMUST00000064685 706 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Upf3bQ3ULL6 Olfr724-201ENSMUST00000075030 1006 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Upf3bQ3ULL6 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
Upf3bQ3ULL6 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC4.72□□□□□ -1.65
Upf3bQ3ULL6 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Upf3bQ3ULL6 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Upf3bQ3ULL6 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC4.72□□□□□ -1.65
Upf3bQ3ULL6 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Upf3bQ3ULL6 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Upf3bQ3ULL6 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Upf3bQ3ULL6 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Upf3bQ3ULL6 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Upf3bQ3ULL6 Gm21854-202ENSMUST00000190391 1480 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Upf3bQ3ULL6 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC4.71□□□□□ -1.66
Upf3bQ3ULL6 Mir680-3-201ENSMUST00000102298 87 ntBASIC4.71□□□□□ -1.66
Upf3bQ3ULL6 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Upf3bQ3ULL6 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Upf3bQ3ULL6 Gm12931-201ENSMUST00000117046 324 ntBASIC4.71□□□□□ -1.66
Upf3bQ3ULL6 Gm10241-201ENSMUST00000117664 286 ntBASIC4.71□□□□□ -1.66
Upf3bQ3ULL6 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Upf3bQ3ULL6 Gm9435-201ENSMUST00000120379 877 ntBASIC4.71□□□□□ -1.66
Upf3bQ3ULL6 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC4.71□□□□□ -1.66
Upf3bQ3ULL6 Gm14288-202ENSMUST00000123863 267 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
Upf3bQ3ULL6 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
Upf3bQ3ULL6 Gm25264-201ENSMUST00000158519 117 ntBASIC4.71□□□□□ -1.66
Upf3bQ3ULL6 Gm27896-201ENSMUST00000175162 317 ntBASIC4.71□□□□□ -1.66
Upf3bQ3ULL6 Gm25019-201ENSMUST00000179732 110 ntBASIC4.71□□□□□ -1.66
Upf3bQ3ULL6 Gm27883-201ENSMUST00000183941 102 ntBASIC4.71□□□□□ -1.66
Upf3bQ3ULL6 Gm27805-201ENSMUST00000184513 79 ntBASIC4.71□□□□□ -1.66
Upf3bQ3ULL6 Gm29031-201ENSMUST00000185316 614 ntBASIC4.71□□□□□ -1.66
Upf3bQ3ULL6 Gm29000-201ENSMUST00000185444 614 ntBASIC4.71□□□□□ -1.66
Upf3bQ3ULL6 Gm28204-201ENSMUST00000185934 614 ntBASIC4.71□□□□□ -1.66
Upf3bQ3ULL6 Gm28290-201ENSMUST00000186505 614 ntBASIC4.71□□□□□ -1.66
Upf3bQ3ULL6 Gm28161-201ENSMUST00000186669 614 ntBASIC4.71□□□□□ -1.66
Upf3bQ3ULL6 Gm28749-209ENSMUST00000189599 614 ntBASIC4.71□□□□□ -1.66
Upf3bQ3ULL6 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Upf3bQ3ULL6 Gm37050-201ENSMUST00000193464 466 ntBASIC4.71□□□□□ -1.66
Upf3bQ3ULL6 Gm33163-201ENSMUST00000194504 614 ntBASIC4.71□□□□□ -1.66
Upf3bQ3ULL6 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 99.9 ms