Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm37987-201ENSMUST00000194999 825 ntBASIC7.42□□□□□ -1.22
Col17a1Q07563 Gm44392-201ENSMUST00000196758 115 ntBASIC7.42□□□□□ -1.22
Col17a1Q07563 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC7.42□□□□□ -1.22
Col17a1Q07563 Gm44656-201ENSMUST00000208428 490 ntBASIC7.42□□□□□ -1.22
Col17a1Q07563 Gm44688-201ENSMUST00000209083 537 ntBASIC7.42□□□□□ -1.22
Col17a1Q07563 Gm18116-201ENSMUST00000220920 537 ntBASIC7.42□□□□□ -1.22
Col17a1Q07563 Gm40394-201ENSMUST00000221321 633 ntTSL 5 BASIC7.42□□□□□ -1.22
Col17a1Q07563 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC7.42□□□□□ -1.22
Col17a1Q07563 Olfr1238-202ENSMUST00000217226 5241 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Col17a1Q07563 AC137871.4-201ENSMUST00000226323 3901 ntBASIC7.42□□□□□ -1.22
Col17a1Q07563 Gm37769-201ENSMUST00000193753 2369 ntBASIC7.42□□□□□ -1.22
Col17a1Q07563 Olfr31-203ENSMUST00000217035 4126 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Col17a1Q07563 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Col17a1Q07563 Gm18757-201ENSMUST00000207938 3141 ntBASIC7.41□□□□□ -1.22
Col17a1Q07563 Olfr1215-202ENSMUST00000214809 2683 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Col17a1Q07563 Cacna1e-203ENSMUST00000187541 14921 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Col17a1Q07563 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Col17a1Q07563 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Col17a1Q07563 Gm43011-201ENSMUST00000197897 4433 ntBASIC7.41□□□□□ -1.22
Col17a1Q07563 AC154573.1-201ENSMUST00000225913 4659 ntBASIC7.41□□□□□ -1.22
Col17a1Q07563 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Col17a1Q07563 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
Col17a1Q07563 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Col17a1Q07563 Vmn1r90-203ENSMUST00000226510 6674 ntAPPRIS ALT2 BASIC7.41□□□□□ -1.22
Col17a1Q07563 Dnah17-203ENSMUST00000106308 14973 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Col17a1Q07563 Gm11255-201ENSMUST00000120448 1180 ntBASIC7.41□□□□□ -1.22
Col17a1Q07563 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC7.41□□□□□ -1.22
Col17a1Q07563 Gm25535-201ENSMUST00000175364 125 ntBASIC7.41□□□□□ -1.22
Col17a1Q07563 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC7.41□□□□□ -1.22
Col17a1Q07563 Gm18396-201ENSMUST00000177095 361 ntBASIC7.41□□□□□ -1.22
Col17a1Q07563 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Col17a1Q07563 Gm28619-201ENSMUST00000185889 622 ntTSL 5 BASIC7.41□□□□□ -1.22
Col17a1Q07563 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC7.41□□□□□ -1.22
Col17a1Q07563 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Col17a1Q07563 Gm36994-201ENSMUST00000192941 492 ntBASIC7.41□□□□□ -1.22
Col17a1Q07563 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC7.41□□□□□ -1.22
Col17a1Q07563 Gm43005-201ENSMUST00000199015 648 ntBASIC7.41□□□□□ -1.22
Col17a1Q07563 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Col17a1Q07563 Gm43884-201ENSMUST00000204251 559 ntBASIC7.41□□□□□ -1.22
Col17a1Q07563 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Col17a1Q07563 Gm17850-201ENSMUST00000210023 1154 ntBASIC7.41□□□□□ -1.22
Col17a1Q07563 Gm7380-201ENSMUST00000211599 466 ntBASIC7.41□□□□□ -1.22
Col17a1Q07563 AC137127.3-201ENSMUST00000213340 349 ntBASIC7.41□□□□□ -1.22
Col17a1Q07563 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC7.41□□□□□ -1.22
Col17a1Q07563 AC167202.1-201ENSMUST00000219027 331 ntBASIC7.41□□□□□ -1.22
Col17a1Q07563 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC7.41□□□□□ -1.22
Col17a1Q07563 AL589742.1-201ENSMUST00000226034 349 ntBASIC7.41□□□□□ -1.22
Col17a1Q07563 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Col17a1Q07563 Gm7099-201ENSMUST00000080066 554 ntBASIC7.41□□□□□ -1.22
Col17a1Q07563 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Col17a1Q07563 Gm45179-201ENSMUST00000208452 4337 ntBASIC7.41□□□□□ -1.22
Col17a1Q07563 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC7.41□□□□□ -1.22
Col17a1Q07563 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC7.41□□□□□ -1.22
Col17a1Q07563 A2ml1-201ENSMUST00000060574 4695 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Col17a1Q07563 Gm9911-201ENSMUST00000211467 2802 ntBASIC7.4□□□□□ -1.22
Col17a1Q07563 Olfr1382-204ENSMUST00000213899 4285 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Col17a1Q07563 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC7.4□□□□□ -1.22
Col17a1Q07563 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Col17a1Q07563 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Col17a1Q07563 Gm43443-201ENSMUST00000202337 2393 ntBASIC7.4□□□□□ -1.22
Col17a1Q07563 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC7.4□□□□□ -1.22
Col17a1Q07563 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
Col17a1Q07563 Gm13339-201ENSMUST00000120651 510 ntBASIC7.4□□□□□ -1.22
Col17a1Q07563 Gm13162-201ENSMUST00000121481 454 ntBASIC7.4□□□□□ -1.22
Col17a1Q07563 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC7.4□□□□□ -1.22
Col17a1Q07563 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Col17a1Q07563 Gm18416-201ENSMUST00000175635 1003 ntBASIC7.4□□□□□ -1.22
Col17a1Q07563 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC7.4□□□□□ -1.22
Col17a1Q07563 Gm6223-201ENSMUST00000178436 871 ntBASIC7.4□□□□□ -1.22
Col17a1Q07563 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC7.4□□□□□ -1.22
Col17a1Q07563 Gm44214-201ENSMUST00000204153 606 ntBASIC7.4□□□□□ -1.22
Col17a1Q07563 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Col17a1Q07563 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Col17a1Q07563 Vmn1r28-203ENSMUST00000228678 909 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Col17a1Q07563 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC7.4□□□□□ -1.23
Col17a1Q07563 Gm42531-201ENSMUST00000201648 4048 ntBASIC7.4□□□□□ -1.23
Col17a1Q07563 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC7.4□□□□□ -1.23
Col17a1Q07563 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.23
Col17a1Q07563 AC124446.1-201ENSMUST00000221027 2644 ntBASIC7.4□□□□□ -1.23
Col17a1Q07563 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC7.4□□□□□ -1.23
Col17a1Q07563 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Col17a1Q07563 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC7.4□□□□□ -1.23
Col17a1Q07563 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Col17a1Q07563 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
Col17a1Q07563 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC7.39□□□□□ -1.23
Col17a1Q07563 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC7.39□□□□□ -1.23
Col17a1Q07563 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC7.39□□□□□ -1.23
Col17a1Q07563 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Col17a1Q07563 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Col17a1Q07563 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC7.39□□□□□ -1.23
Col17a1Q07563 Gm22514-201ENSMUST00000122547 308 ntBASIC7.39□□□□□ -1.23
Col17a1Q07563 Gm15819-201ENSMUST00000153089 481 ntTSL 2 BASIC7.39□□□□□ -1.23
Col17a1Q07563 Gm29554-201ENSMUST00000187922 821 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Col17a1Q07563 Gm18843-201ENSMUST00000194982 719 ntBASIC7.39□□□□□ -1.23
Col17a1Q07563 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC7.39□□□□□ -1.23
Col17a1Q07563 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC7.39□□□□□ -1.23
Col17a1Q07563 Tas2r146-ps1-201ENSMUST00000203065 934 ntBASIC7.39□□□□□ -1.23
Col17a1Q07563 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC7.39□□□□□ -1.23
Col17a1Q07563 Pah-204ENSMUST00000219813 789 ntTSL 3 BASIC7.39□□□□□ -1.23
Col17a1Q07563 Gm6043-201ENSMUST00000099961 492 ntBASIC7.39□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms