Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gm7451-201ENSMUST00000208382 1392 ntBASIC5.76□□□□□ -1.49
Sox9Q04887 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Sox9Q04887 Gm13928-201ENSMUST00000120326 1732 ntBASIC5.76□□□□□ -1.49
Sox9Q04887 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Sox9Q04887 Gm37789-201ENSMUST00000192862 2889 ntBASIC5.76□□□□□ -1.49
Sox9Q04887 Gm38372-201ENSMUST00000194854 4028 ntBASIC5.76□□□□□ -1.49
Sox9Q04887 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Sox9Q04887 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
Sox9Q04887 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Sox9Q04887 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Sox9Q04887 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Sox9Q04887 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Sox9Q04887 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Sox9Q04887 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
Sox9Q04887 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Sox9Q04887 Gm42992-201ENSMUST00000197043 6836 ntBASIC5.75□□□□□ -1.49
Sox9Q04887 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC5.75□□□□□ -1.49
Sox9Q04887 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
Sox9Q04887 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Sox9Q04887 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Sox9Q04887 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Sox9Q04887 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Sox9Q04887 Gm13213-201ENSMUST00000119668 474 ntBASIC5.75□□□□□ -1.49
Sox9Q04887 Gm12466-201ENSMUST00000121199 620 ntBASIC5.75□□□□□ -1.49
Sox9Q04887 Gm14162-201ENSMUST00000121985 601 ntBASIC5.75□□□□□ -1.49
Sox9Q04887 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Sox9Q04887 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC5.75□□□□□ -1.49
Sox9Q04887 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Sox9Q04887 Olfr723-201ENSMUST00000164157 1006 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Sox9Q04887 Gm6395-201ENSMUST00000167639 691 ntBASIC5.75□□□□□ -1.49
Sox9Q04887 Gm22411-201ENSMUST00000175462 126 ntBASIC5.75□□□□□ -1.49
Sox9Q04887 Gm22002-201ENSMUST00000175622 125 ntBASIC5.75□□□□□ -1.49
Sox9Q04887 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC5.75□□□□□ -1.49
Sox9Q04887 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC5.75□□□□□ -1.49
Sox9Q04887 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC5.75□□□□□ -1.49
Sox9Q04887 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC5.75□□□□□ -1.49
Sox9Q04887 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC5.75□□□□□ -1.49
Sox9Q04887 Gm28414-201ENSMUST00000190111 294 ntBASIC5.75□□□□□ -1.49
Sox9Q04887 Gm2367-201ENSMUST00000192374 472 ntBASIC5.75□□□□□ -1.49
Sox9Q04887 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC5.75□□□□□ -1.49
Sox9Q04887 Gm9632-201ENSMUST00000195934 643 ntBASIC5.75□□□□□ -1.49
Sox9Q04887 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC5.75□□□□□ -1.49
Sox9Q04887 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC5.75□□□□□ -1.49
Sox9Q04887 Gm42958-201ENSMUST00000197595 318 ntBASIC5.75□□□□□ -1.49
Sox9Q04887 Gm43315-201ENSMUST00000198120 313 ntBASIC5.75□□□□□ -1.49
Sox9Q04887 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC5.75□□□□□ -1.49
Sox9Q04887 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Sox9Q04887 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC5.75□□□□□ -1.49
Sox9Q04887 Olfr723-202ENSMUST00000206058 1078 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
Sox9Q04887 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC5.75□□□□□ -1.49
Sox9Q04887 Gm29785-201ENSMUST00000217033 383 ntBASIC5.75□□□□□ -1.49
Sox9Q04887 Gm19599-201ENSMUST00000218898 358 ntBASIC5.75□□□□□ -1.49
Sox9Q04887 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC5.75□□□□□ -1.49
Sox9Q04887 AC126275.1-201ENSMUST00000224881 446 ntBASIC5.75□□□□□ -1.49
Sox9Q04887 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Sox9Q04887 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Sox9Q04887 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Sox9Q04887 Olfr724-201ENSMUST00000075030 1006 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Sox9Q04887 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Sox9Q04887 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Sox9Q04887 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Sox9Q04887 Gm14781-201ENSMUST00000078469 1360 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Sox9Q04887 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Sox9Q04887 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC5.75□□□□□ -1.49
Sox9Q04887 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Sox9Q04887 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Sox9Q04887 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
Sox9Q04887 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Sox9Q04887 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Sox9Q04887 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Sox9Q04887 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Sox9Q04887 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Sox9Q04887 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Sox9Q04887 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Sox9Q04887 Gm43485-201ENSMUST00000199292 1710 ntBASIC5.74□□□□□ -1.49
Sox9Q04887 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Sox9Q04887 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Sox9Q04887 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Sox9Q04887 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Sox9Q04887 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Sox9Q04887 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Sox9Q04887 Gm22072-201ENSMUST00000116850 121 ntBASIC5.74□□□□□ -1.49
Sox9Q04887 Gm22091-201ENSMUST00000116908 127 ntBASIC5.74□□□□□ -1.49
Sox9Q04887 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC5.74□□□□□ -1.49
Sox9Q04887 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Sox9Q04887 Gm12433-201ENSMUST00000119659 255 ntBASIC5.74□□□□□ -1.49
Sox9Q04887 Gm11990-201ENSMUST00000121505 897 ntBASIC5.74□□□□□ -1.49
Sox9Q04887 Snrpert-201ENSMUST00000121967 279 ntBASIC5.74□□□□□ -1.49
Sox9Q04887 Gm15111-201ENSMUST00000122142 878 ntBASIC5.74□□□□□ -1.49
Sox9Q04887 Gm23700-201ENSMUST00000158842 102 ntBASIC5.74□□□□□ -1.49
Sox9Q04887 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC5.74□□□□□ -1.49
Sox9Q04887 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC5.74□□□□□ -1.49
Sox9Q04887 Gm22650-201ENSMUST00000175138 105 ntBASIC5.74□□□□□ -1.49
Sox9Q04887 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Sox9Q04887 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Sox9Q04887 Gm10784-201ENSMUST00000178715 238 ntBASIC5.74□□□□□ -1.49
Sox9Q04887 Mir6238-201ENSMUST00000184140 129 ntBASIC5.74□□□□□ -1.49
Sox9Q04887 Mir6410-201ENSMUST00000184204 104 ntBASIC5.74□□□□□ -1.49
Sox9Q04887 Gm28597-201ENSMUST00000187664 666 ntBASIC5.74□□□□□ -1.49
Sox9Q04887 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms