Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Nkx3-1P97436 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Nkx3-1P97436 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC3.91□□□□□ -1.78
Nkx3-1P97436 Gm6162-201ENSMUST00000194870 2930 ntBASIC3.91□□□□□ -1.78
Nkx3-1P97436 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Nkx3-1P97436 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
Nkx3-1P97436 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
Nkx3-1P97436 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.78
Nkx3-1P97436 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Nkx3-1P97436 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Nkx3-1P97436 AC115034.1-201ENSMUST00000215393 3846 ntBASIC3.9□□□□□ -1.78
Nkx3-1P97436 AC156632.1-201ENSMUST00000220626 3845 ntBASIC3.9□□□□□ -1.78
Nkx3-1P97436 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.78
Nkx3-1P97436 BC051142-201ENSMUST00000078615 1899 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
Nkx3-1P97436 Gm16892-201ENSMUST00000180999 1726 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
Nkx3-1P97436 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Nkx3-1P97436 Gm23273-201ENSMUST00000104058 135 ntBASIC3.9□□□□□ -1.79
Nkx3-1P97436 Gm11506-201ENSMUST00000122414 470 ntBASIC3.9□□□□□ -1.79
Nkx3-1P97436 Gm16055-201ENSMUST00000161366 626 ntTSL 2 BASIC3.9□□□□□ -1.79
Nkx3-1P97436 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC3.9□□□□□ -1.79
Nkx3-1P97436 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC3.9□□□□□ -1.79
Nkx3-1P97436 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC3.9□□□□□ -1.79
Nkx3-1P97436 Scgb2b12-201ENSMUST00000183195 511 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
Nkx3-1P97436 Gm5058-201ENSMUST00000187331 463 ntBASIC3.9□□□□□ -1.79
Nkx3-1P97436 Gm29668-201ENSMUST00000187802 315 ntBASIC3.9□□□□□ -1.79
Nkx3-1P97436 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Nkx3-1P97436 Gm18183-201ENSMUST00000191024 615 ntBASIC3.9□□□□□ -1.79
Nkx3-1P97436 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC3.9□□□□□ -1.79
Nkx3-1P97436 Gm42830-201ENSMUST00000196642 313 ntBASIC3.9□□□□□ -1.79
Nkx3-1P97436 Gm44054-201ENSMUST00000203814 372 ntBASIC3.9□□□□□ -1.79
Nkx3-1P97436 Gm45037-201ENSMUST00000207475 673 ntTSL 5 BASIC3.9□□□□□ -1.79
Nkx3-1P97436 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Nkx3-1P97436 Gm8556-201ENSMUST00000210437 664 ntBASIC3.9□□□□□ -1.79
Nkx3-1P97436 AC132384.5-201ENSMUST00000218562 226 ntBASIC3.9□□□□□ -1.79
Nkx3-1P97436 CR974429.1-201ENSMUST00000220877 827 ntBASIC3.9□□□□□ -1.79
Nkx3-1P97436 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC3.9□□□□□ -1.79
Nkx3-1P97436 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC3.9□□□□□ -1.79
Nkx3-1P97436 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Nkx3-1P97436 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Nkx3-1P97436 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Nkx3-1P97436 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Nkx3-1P97436 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Nkx3-1P97436 Olfr1037-202ENSMUST00000213333 1610 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Nkx3-1P97436 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Nkx3-1P97436 Gm42494-201ENSMUST00000196515 3051 ntBASIC3.9□□□□□ -1.79
Nkx3-1P97436 Gm43990-201ENSMUST00000203790 1691 ntBASIC3.9□□□□□ -1.79
Nkx3-1P97436 AC126673.1-201ENSMUST00000223208 3856 ntBASIC3.9□□□□□ -1.79
Nkx3-1P97436 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Nkx3-1P97436 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Nkx3-1P97436 Olfr1331-203ENSMUST00000216589 3139 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
Nkx3-1P97436 AC108802.1-201ENSMUST00000219501 3142 ntBASIC3.89□□□□□ -1.79
Nkx3-1P97436 Olfr987-202ENSMUST00000111598 1418 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
Nkx3-1P97436 AC122317.3-201ENSMUST00000219320 3524 ntBASIC3.89□□□□□ -1.79
Nkx3-1P97436 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
Nkx3-1P97436 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Nkx3-1P97436 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Nkx3-1P97436 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Nkx3-1P97436 Olfr235-204ENSMUST00000214613 2217 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
Nkx3-1P97436 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Nkx3-1P97436 Gm14305-201ENSMUST00000108980 1167 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Nkx3-1P97436 Gm12062-201ENSMUST00000117533 259 ntBASIC3.89□□□□□ -1.79
Nkx3-1P97436 Gm14516-201ENSMUST00000120012 252 ntBASIC3.89□□□□□ -1.79
Nkx3-1P97436 Gm15166-201ENSMUST00000120790 385 ntBASIC3.89□□□□□ -1.79
Nkx3-1P97436 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC3.89□□□□□ -1.79
Nkx3-1P97436 Gm22958-201ENSMUST00000122512 184 ntBASIC3.89□□□□□ -1.79
Nkx3-1P97436 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC3.89□□□□□ -1.79
Nkx3-1P97436 A930041C12Rik-201ENSMUST00000149156 537 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Nkx3-1P97436 Igfl3-201ENSMUST00000152973 575 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Nkx3-1P97436 Gm24690-201ENSMUST00000157759 97 ntBASIC3.89□□□□□ -1.79
Nkx3-1P97436 Gm25048-201ENSMUST00000158598 91 ntBASIC3.89□□□□□ -1.79
Nkx3-1P97436 Gm24664-201ENSMUST00000158939 100 ntBASIC3.89□□□□□ -1.79
Nkx3-1P97436 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Nkx3-1P97436 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC3.89□□□□□ -1.79
Nkx3-1P97436 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC3.89□□□□□ -1.79
Nkx3-1P97436 Gm23638-201ENSMUST00000175073 126 ntBASIC3.89□□□□□ -1.79
Nkx3-1P97436 Gm23158-201ENSMUST00000175076 126 ntBASIC3.89□□□□□ -1.79
Nkx3-1P97436 Gm22907-201ENSMUST00000175198 126 ntBASIC3.89□□□□□ -1.79
Nkx3-1P97436 Gm22625-201ENSMUST00000175382 126 ntBASIC3.89□□□□□ -1.79
Nkx3-1P97436 Gm22875-201ENSMUST00000175449 126 ntBASIC3.89□□□□□ -1.79
Nkx3-1P97436 Gm25197-201ENSMUST00000175516 126 ntBASIC3.89□□□□□ -1.79
Nkx3-1P97436 Gm27857-201ENSMUST00000176930 126 ntBASIC3.89□□□□□ -1.79
Nkx3-1P97436 Gm20657-201ENSMUST00000177079 515 ntBASIC3.89□□□□□ -1.79
Nkx3-1P97436 Gm26268-201ENSMUST00000177685 126 ntBASIC3.89□□□□□ -1.79
Nkx3-1P97436 Gm13249-201ENSMUST00000177803 345 ntBASIC3.89□□□□□ -1.79
Nkx3-1P97436 Gm23681-201ENSMUST00000178821 126 ntBASIC3.89□□□□□ -1.79
Nkx3-1P97436 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Nkx3-1P97436 Gm13144-201ENSMUST00000179385 345 ntBASIC3.89□□□□□ -1.79
Nkx3-1P97436 Gm6075-201ENSMUST00000186816 486 ntBASIC3.89□□□□□ -1.79
Nkx3-1P97436 Gm5284-201ENSMUST00000199053 903 ntBASIC3.89□□□□□ -1.79
Nkx3-1P97436 Gm18452-201ENSMUST00000202968 1111 ntBASIC3.89□□□□□ -1.79
Nkx3-1P97436 Gm44006-201ENSMUST00000204273 396 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Nkx3-1P97436 Gm45458-201ENSMUST00000209900 522 ntBASIC3.89□□□□□ -1.79
Nkx3-1P97436 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC3.89□□□□□ -1.79
Nkx3-1P97436 AC153526.4-201ENSMUST00000217713 379 ntBASIC3.89□□□□□ -1.79
Nkx3-1P97436 Gm46190-201ENSMUST00000219650 427 ntBASIC3.89□□□□□ -1.79
Nkx3-1P97436 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC3.89□□□□□ -1.79
Nkx3-1P97436 Olfr629-201ENSMUST00000051346 1122 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Nkx3-1P97436 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Nkx3-1P97436 Cd59b-201ENSMUST00000090429 796 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Nkx3-1P97436 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms