Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm44667-201ENSMUST00000207632 3337 ntBASIC5.58□□□□□ -1.52
Shmt1P50431 Gm7754-201ENSMUST00000223075 2064 ntBASIC5.58□□□□□ -1.52
Shmt1P50431 Olfr1138-202ENSMUST00000214573 1611 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Shmt1P50431 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
Shmt1P50431 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Shmt1P50431 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
Shmt1P50431 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Shmt1P50431 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Shmt1P50431 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Shmt1P50431 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC5.57□□□□□ -1.52
Shmt1P50431 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Shmt1P50431 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Shmt1P50431 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Shmt1P50431 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC5.57□□□□□ -1.52
Shmt1P50431 CT009734.1-201ENSMUST00000227657 1687 ntBASIC5.57□□□□□ -1.52
Shmt1P50431 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Shmt1P50431 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Shmt1P50431 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC5.57□□□□□ -1.52
Shmt1P50431 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Shmt1P50431 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC5.57□□□□□ -1.52
Shmt1P50431 Gm12873-201ENSMUST00000119988 422 ntBASIC5.57□□□□□ -1.52
Shmt1P50431 Gm16463-201ENSMUST00000120527 721 ntBASIC5.57□□□□□ -1.52
Shmt1P50431 Gm16179-201ENSMUST00000120685 373 ntBASIC5.57□□□□□ -1.52
Shmt1P50431 Gm12007-201ENSMUST00000120978 597 ntBASIC5.57□□□□□ -1.52
Shmt1P50431 Gm11761-201ENSMUST00000121392 445 ntBASIC5.57□□□□□ -1.52
Shmt1P50431 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Shmt1P50431 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC5.57□□□□□ -1.52
Shmt1P50431 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC5.57□□□□□ -1.52
Shmt1P50431 Gm23546-201ENSMUST00000158211 137 ntBASIC5.57□□□□□ -1.52
Shmt1P50431 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC5.57□□□□□ -1.52
Shmt1P50431 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC5.57□□□□□ -1.52
Shmt1P50431 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC5.57□□□□□ -1.52
Shmt1P50431 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC5.57□□□□□ -1.52
Shmt1P50431 Gm17953-201ENSMUST00000192061 667 ntBASIC5.57□□□□□ -1.52
Shmt1P50431 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC5.57□□□□□ -1.52
Shmt1P50431 Gm37173-201ENSMUST00000194498 1017 ntBASIC5.57□□□□□ -1.52
Shmt1P50431 Gm42542-201ENSMUST00000197978 268 ntBASIC5.57□□□□□ -1.52
Shmt1P50431 Gm19104-201ENSMUST00000198392 679 ntBASIC5.57□□□□□ -1.52
Shmt1P50431 Gm42814-201ENSMUST00000199370 460 ntBASIC5.57□□□□□ -1.52
Shmt1P50431 Chaer1-201ENSMUST00000201649 651 ntTSL 5 BASIC5.57□□□□□ -1.52
Shmt1P50431 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Shmt1P50431 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC5.57□□□□□ -1.52
Shmt1P50431 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC5.57□□□□□ -1.52
Shmt1P50431 Gm45422-201ENSMUST00000211476 246 ntBASIC5.57□□□□□ -1.52
Shmt1P50431 AC156832.3-201ENSMUST00000215591 435 ntBASIC5.57□□□□□ -1.52
Shmt1P50431 Gm6906-201ENSMUST00000218014 569 ntBASIC5.57□□□□□ -1.52
Shmt1P50431 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC5.57□□□□□ -1.52
Shmt1P50431 AC160114.1-201ENSMUST00000221930 365 ntBASIC5.57□□□□□ -1.52
Shmt1P50431 AC164116.1-201ENSMUST00000225810 622 ntBASIC5.57□□□□□ -1.52
Shmt1P50431 AC165953.1-201ENSMUST00000226386 357 ntBASIC5.57□□□□□ -1.52
Shmt1P50431 AC122393.1-201ENSMUST00000226570 319 ntBASIC5.57□□□□□ -1.52
Shmt1P50431 CT025525.3-201ENSMUST00000228858 366 ntBASIC5.57□□□□□ -1.52
Shmt1P50431 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Shmt1P50431 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Shmt1P50431 Olfr697-201ENSMUST00000050541 1047 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Shmt1P50431 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC5.57□□□□□ -1.52
Shmt1P50431 Vmn1r43-201ENSMUST00000089418 1069 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Shmt1P50431 Olfr1297-201ENSMUST00000099612 939 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Shmt1P50431 Olfr1024-201ENSMUST00000099912 984 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Shmt1P50431 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Shmt1P50431 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC5.57□□□□□ -1.52
Shmt1P50431 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Shmt1P50431 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Shmt1P50431 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
Shmt1P50431 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Shmt1P50431 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC5.57□□□□□ -1.52
Shmt1P50431 Zfp605-201ENSMUST00000086686 2085 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
Shmt1P50431 Gm42534-201ENSMUST00000196063 1754 ntBASIC5.57□□□□□ -1.52
Shmt1P50431 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Shmt1P50431 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Shmt1P50431 Serpinb5-201ENSMUST00000086701 2572 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Shmt1P50431 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Shmt1P50431 Mdga2-211ENSMUST00000222623 1449 ntTSL 5 BASIC5.57□□□□□ -1.52
Shmt1P50431 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
Shmt1P50431 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC5.56□□□□□ -1.52
Shmt1P50431 Gm42701-201ENSMUST00000196117 1657 ntBASIC5.56□□□□□ -1.52
Shmt1P50431 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Shmt1P50431 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC5.56□□□□□ -1.52
Shmt1P50431 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Shmt1P50431 Wdr49-203ENSMUST00000204341 1344 ntTSL 5 BASIC5.56□□□□□ -1.52
Shmt1P50431 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Shmt1P50431 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Shmt1P50431 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
Shmt1P50431 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Shmt1P50431 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC5.56□□□□□ -1.52
Shmt1P50431 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Shmt1P50431 Gm12131-201ENSMUST00000117479 359 ntBASIC5.56□□□□□ -1.52
Shmt1P50431 Gm14624-201ENSMUST00000117746 192 ntBASIC5.56□□□□□ -1.52
Shmt1P50431 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC5.56□□□□□ -1.52
Shmt1P50431 Gm13435-201ENSMUST00000120111 1023 ntBASIC5.56□□□□□ -1.52
Shmt1P50431 Gm14907-201ENSMUST00000121948 854 ntBASIC5.56□□□□□ -1.52
Shmt1P50431 Gm15885-201ENSMUST00000122114 388 ntBASIC5.56□□□□□ -1.52
Shmt1P50431 n-R5s174-201ENSMUST00000122638 121 ntBASIC5.56□□□□□ -1.52
Shmt1P50431 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC5.56□□□□□ -1.52
Shmt1P50431 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Shmt1P50431 Gm25979-201ENSMUST00000157177 138 ntBASIC5.56□□□□□ -1.52
Shmt1P50431 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC5.56□□□□□ -1.52
Shmt1P50431 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC5.56□□□□□ -1.52
Shmt1P50431 Gm42936-201ENSMUST00000174019 652 ntTSL 3 BASIC5.56□□□□□ -1.52
Shmt1P50431 Gm27781-201ENSMUST00000185185 92 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms