Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 AC127270.2-201ENSMUST00000221337 247 ntBASIC4.44□□□□□ -1.7
HttP42859 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HttP42859 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
HttP42859 Gm37890-201ENSMUST00000195610 3992 ntBASIC4.44□□□□□ -1.7
HttP42859 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HttP42859 Pclo-201ENSMUST00000030691 20084 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
HttP42859 Olfr976-201ENSMUST00000169307 2813 ntAPPRIS P2 BASIC4.44□□□□□ -1.7
HttP42859 Heph-201ENSMUST00000033553 4743 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HttP42859 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
HttP42859 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
HttP42859 Gm18180-201ENSMUST00000187562 1484 ntBASIC4.44□□□□□ -1.7
HttP42859 Gm26300-201ENSMUST00000102282 94 ntBASIC4.44□□□□□ -1.7
HttP42859 Gm25369-201ENSMUST00000158848 132 ntBASIC4.44□□□□□ -1.7
HttP42859 Gm18505-201ENSMUST00000187360 790 ntBASIC4.44□□□□□ -1.7
HttP42859 AC131677.1-201ENSMUST00000218721 535 ntBASIC4.44□□□□□ -1.7
HttP42859 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
HttP42859 Defb1-201ENSMUST00000051017 872 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HttP42859 Grin2a-206ENSMUST00000199708 14634 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
HttP42859 Atp10b-201ENSMUST00000077659 6825 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
HttP42859 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC4.44□□□□□ -1.7
HttP42859 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
HttP42859 Gm42552-201ENSMUST00000196754 4497 ntBASIC4.44□□□□□ -1.7
HttP42859 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HttP42859 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC4.44□□□□□ -1.7
HttP42859 Gm12412-201ENSMUST00000121867 328 ntBASIC4.43□□□□□ -1.7
HttP42859 Gm23499-201ENSMUST00000157736 268 ntBASIC4.43□□□□□ -1.7
HttP42859 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
HttP42859 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
HttP42859 Gm28389-201ENSMUST00000190090 697 ntBASIC4.43□□□□□ -1.7
HttP42859 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC4.43□□□□□ -1.7
HttP42859 AC158981.3-201ENSMUST00000226844 1024 ntBASIC4.43□□□□□ -1.7
HttP42859 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
HttP42859 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC4.43□□□□□ -1.7
HttP42859 Gm37087-201ENSMUST00000192966 3309 ntBASIC4.43□□□□□ -1.7
HttP42859 Gm37752-201ENSMUST00000193494 3309 ntBASIC4.43□□□□□ -1.7
HttP42859 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HttP42859 Onecut2-201ENSMUST00000115145 13389 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
HttP42859 Onecut2-202ENSMUST00000175965 13391 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
HttP42859 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
HttP42859 Olfr338-201ENSMUST00000072114 5780 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
HttP42859 Kat6b-209ENSMUST00000182964 7699 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
HttP42859 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
HttP42859 Gm2123-201ENSMUST00000221476 2836 ntBASIC4.43□□□□□ -1.7
HttP42859 Abcb11-201ENSMUST00000102709 5025 ntAPPRIS P2 TSL 5 BASIC4.43□□□□□ -1.7
HttP42859 Gm23855-201ENSMUST00000158377 135 ntBASIC4.43□□□□□ -1.7
HttP42859 Gm26141-201ENSMUST00000175299 126 ntBASIC4.43□□□□□ -1.7
HttP42859 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC4.43□□□□□ -1.7
HttP42859 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC4.43□□□□□ -1.7
HttP42859 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HttP42859 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
HttP42859 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
HttP42859 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
HttP42859 Gm37682-201ENSMUST00000191776 522 ntBASIC4.43□□□□□ -1.7
HttP42859 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC4.43□□□□□ -1.7
HttP42859 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
HttP42859 Gm45322-201ENSMUST00000211642 1361 ntBASIC4.43□□□□□ -1.7
HttP42859 Dclk1-201ENSMUST00000054237 7847 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
HttP42859 Olfr293-202ENSMUST00000214401 2852 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
HttP42859 Gm42986-201ENSMUST00000201618 3385 ntBASIC4.43□□□□□ -1.7
HttP42859 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HttP42859 Gm15185-201ENSMUST00000117397 746 ntBASIC4.42□□□□□ -1.7
HttP42859 Olfr1309-201ENSMUST00000207885 964 ntBASIC4.42□□□□□ -1.7
HttP42859 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
HttP42859 AC156798.1-201ENSMUST00000220508 224 ntBASIC4.42□□□□□ -1.7
HttP42859 Mir370-201ENSMUST00000083499 79 ntBASIC4.42□□□□□ -1.7
HttP42859 Gm10161-201ENSMUST00000091506 204 ntBASIC4.42□□□□□ -1.7
HttP42859 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HttP42859 Gm43665-201ENSMUST00000198672 1659 ntBASIC4.42□□□□□ -1.7
HttP42859 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC4.42□□□□□ -1.7
HttP42859 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
HttP42859 Gm12125-201ENSMUST00000117261 736 ntBASIC4.42□□□□□ -1.7
HttP42859 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HttP42859 Gm23602-201ENSMUST00000157258 132 ntBASIC4.42□□□□□ -1.7
HttP42859 Gm29320-201ENSMUST00000185235 615 ntBASIC4.42□□□□□ -1.7
HttP42859 Gm29179-202ENSMUST00000186138 615 ntBASIC4.42□□□□□ -1.7
HttP42859 Gm28598-201ENSMUST00000186490 615 ntBASIC4.42□□□□□ -1.7
HttP42859 Gm29448-201ENSMUST00000186675 615 ntBASIC4.42□□□□□ -1.7
HttP42859 Gm29314-201ENSMUST00000186800 615 ntBASIC4.42□□□□□ -1.7
HttP42859 Gm28253-202ENSMUST00000187971 615 ntBASIC4.42□□□□□ -1.7
HttP42859 Gm29268-201ENSMUST00000188669 615 ntBASIC4.42□□□□□ -1.7
HttP42859 Gm29169-201ENSMUST00000189835 615 ntBASIC4.42□□□□□ -1.7
HttP42859 Gm28978-201ENSMUST00000191120 615 ntBASIC4.42□□□□□ -1.7
HttP42859 Gm37172-201ENSMUST00000191926 615 ntBASIC4.42□□□□□ -1.7
HttP42859 Gm7639-201ENSMUST00000212608 484 ntBASIC4.42□□□□□ -1.7
HttP42859 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
HttP42859 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
HttP42859 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HttP42859 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HttP42859 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HttP42859 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
HttP42859 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC4.42□□□□□ -1.7
HttP42859 Olfr1382-203ENSMUST00000213707 4294 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
HttP42859 Olfr1382-204ENSMUST00000213899 4285 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
HttP42859 Olfr1382-205ENSMUST00000217564 4287 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
HttP42859 Vmn1r127-201ENSMUST00000105199 918 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
HttP42859 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
HttP42859 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
HttP42859 Obox4-ps1-201ENSMUST00000184446 700 ntBASIC4.41□□□□□ -1.7
HttP42859 AC159244.1-201ENSMUST00000220964 594 ntBASIC4.41□□□□□ -1.7
HttP42859 AL606513.1-201ENSMUST00000225369 579 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms