Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col18a1P39061 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col18a1P39061 Olfr1038-ps-202ENSMUST00000216665 4530 ntTSL 3 BASIC6.64□□□□□ -1.35
Col18a1P39061 Abcc9-202ENSMUST00000087527 6213 ntAPPRIS P5 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col18a1P39061 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col18a1P39061 Gm37181-201ENSMUST00000192513 1727 ntBASIC6.64□□□□□ -1.35
Col18a1P39061 AC154368.2-201ENSMUST00000222334 1724 ntBASIC6.64□□□□□ -1.35
Col18a1P39061 Map2-205ENSMUST00000114015 5440 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Col18a1P39061 Gm43209-201ENSMUST00000198949 1588 ntBASIC6.64□□□□□ -1.35
Col18a1P39061 Etl4-209ENSMUST00000114627 7413 ntAPPRIS P3 TSL 5 BASIC6.64□□□□□ -1.35
Col18a1P39061 Cenpi-201ENSMUST00000081064 3227 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col18a1P39061 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC6.64□□□□□ -1.35
Col18a1P39061 Gm9577-201ENSMUST00000174655 2620 ntBASIC6.64□□□□□ -1.35
Col18a1P39061 Gm4541-201ENSMUST00000208901 1848 ntBASIC6.64□□□□□ -1.35
Col18a1P39061 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col18a1P39061 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC6.64□□□□□ -1.35
Col18a1P39061 Gm38351-201ENSMUST00000195466 2518 ntBASIC6.64□□□□□ -1.35
Col18a1P39061 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Col18a1P39061 Gm14706-201ENSMUST00000117744 255 ntBASIC6.64□□□□□ -1.35
Col18a1P39061 Gm14082-201ENSMUST00000118582 801 ntBASIC6.64□□□□□ -1.35
Col18a1P39061 Gm12224-202ENSMUST00000127107 726 ntTSL 3 BASIC6.64□□□□□ -1.35
Col18a1P39061 Gm15868-201ENSMUST00000144291 520 ntTSL 5 BASIC6.64□□□□□ -1.35
Col18a1P39061 Gm24534-201ENSMUST00000157949 291 ntBASIC6.64□□□□□ -1.35
Col18a1P39061 Gm15914-201ENSMUST00000161922 309 ntBASIC6.64□□□□□ -1.35
Col18a1P39061 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC6.64□□□□□ -1.35
Col18a1P39061 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC6.64□□□□□ -1.35
Col18a1P39061 Khdrbs2-202ENSMUST00000185666 543 ntTSL 2 BASIC6.64□□□□□ -1.35
Col18a1P39061 Gm18802-201ENSMUST00000186270 888 ntBASIC6.64□□□□□ -1.35
Col18a1P39061 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC6.64□□□□□ -1.35
Col18a1P39061 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col18a1P39061 Gm28655-201ENSMUST00000191538 692 ntBASIC6.64□□□□□ -1.35
Col18a1P39061 Gm28060-201ENSMUST00000191554 189 ntBASIC6.64□□□□□ -1.35
Col18a1P39061 Gm37111-201ENSMUST00000193250 634 ntBASIC6.64□□□□□ -1.35
Col18a1P39061 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC6.64□□□□□ -1.35
Col18a1P39061 Gm43090-201ENSMUST00000202459 314 ntBASIC6.64□□□□□ -1.35
Col18a1P39061 Gm45673-201ENSMUST00000210293 358 ntBASIC6.64□□□□□ -1.35
Col18a1P39061 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC6.64□□□□□ -1.35
Col18a1P39061 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC6.64□□□□□ -1.35
Col18a1P39061 AC123534.1-201ENSMUST00000224060 656 ntBASIC6.64□□□□□ -1.35
Col18a1P39061 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Col18a1P39061 Gm5321-201ENSMUST00000072050 447 ntBASIC6.64□□□□□ -1.35
Col18a1P39061 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Col18a1P39061 Mir463-201ENSMUST00000093570 75 ntBASIC6.64□□□□□ -1.35
Col18a1P39061 Olfr775-201ENSMUST00000097163 939 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Col18a1P39061 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Col18a1P39061 Gm43426-201ENSMUST00000197287 2597 ntBASIC6.64□□□□□ -1.35
Col18a1P39061 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC6.64□□□□□ -1.35
Col18a1P39061 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Col18a1P39061 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col18a1P39061 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC6.63□□□□□ -1.35
Col18a1P39061 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC6.63□□□□□ -1.35
Col18a1P39061 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Col18a1P39061 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col18a1P39061 AC131329.1-201ENSMUST00000221204 3487 ntBASIC6.63□□□□□ -1.35
Col18a1P39061 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Col18a1P39061 Gm24635-201ENSMUST00000122712 128 ntBASIC6.63□□□□□ -1.35
Col18a1P39061 Gm16362-201ENSMUST00000135189 214 ntBASIC6.63□□□□□ -1.35
Col18a1P39061 Ugt2a2-202ENSMUST00000144144 929 ntTSL 2 BASIC6.63□□□□□ -1.35
Col18a1P39061 Gm22080-201ENSMUST00000157591 106 ntBASIC6.63□□□□□ -1.35
Col18a1P39061 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC6.63□□□□□ -1.35
Col18a1P39061 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Col18a1P39061 Gm27905-201ENSMUST00000184005 207 ntBASIC6.63□□□□□ -1.35
Col18a1P39061 Gm18775-201ENSMUST00000190763 586 ntBASIC6.63□□□□□ -1.35
Col18a1P39061 Gm43765-201ENSMUST00000196303 893 ntBASIC6.63□□□□□ -1.35
Col18a1P39061 Gm45434-201ENSMUST00000210550 293 ntBASIC6.63□□□□□ -1.35
Col18a1P39061 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC6.63□□□□□ -1.35
Col18a1P39061 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Col18a1P39061 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Col18a1P39061 Gm37767-201ENSMUST00000193239 1834 ntBASIC6.63□□□□□ -1.35
Col18a1P39061 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Col18a1P39061 Olfr131-203ENSMUST00000215940 1614 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Col18a1P39061 Cpa6-201ENSMUST00000035577 1932 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col18a1P39061 3110043O21Rik-201ENSMUST00000084724 3413 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Col18a1P39061 Gm43469-201ENSMUST00000196084 4634 ntBASIC6.63□□□□□ -1.35
Col18a1P39061 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
Col18a1P39061 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC6.63□□□□□ -1.35
Col18a1P39061 Epgn-201ENSMUST00000041516 1760 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Col18a1P39061 Gm23294-201ENSMUST00000104150 164 ntBASIC6.62□□□□□ -1.35
Col18a1P39061 Gm23111-201ENSMUST00000122652 105 ntBASIC6.62□□□□□ -1.35
Col18a1P39061 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Col18a1P39061 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC6.62□□□□□ -1.35
Col18a1P39061 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
Col18a1P39061 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Col18a1P39061 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Col18a1P39061 Gm37495-201ENSMUST00000194590 264 ntBASIC6.62□□□□□ -1.35
Col18a1P39061 4930425K10Rik-201ENSMUST00000201190 745 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Col18a1P39061 Gm45539-201ENSMUST00000210313 428 ntBASIC6.62□□□□□ -1.35
Col18a1P39061 AC155305.1-201ENSMUST00000222207 319 ntBASIC6.62□□□□□ -1.35
Col18a1P39061 AC154335.2-201ENSMUST00000225916 638 ntBASIC6.62□□□□□ -1.35
Col18a1P39061 AC165437.1-201ENSMUST00000228640 536 ntBASIC6.62□□□□□ -1.35
Col18a1P39061 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Col18a1P39061 Gm8734-201ENSMUST00000211669 1312 ntBASIC6.62□□□□□ -1.35
Col18a1P39061 Elovl6-201ENSMUST00000071402 5951 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Col18a1P39061 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Col18a1P39061 Kcnj15-204ENSMUST00000113856 5129 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
Col18a1P39061 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Col18a1P39061 AC154227.1-201ENSMUST00000228809 2467 ntBASIC6.62□□□□□ -1.35
Col18a1P39061 AC121844.3-201ENSMUST00000219124 1785 ntBASIC6.62□□□□□ -1.35
Col18a1P39061 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Col18a1P39061 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC6.62□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 92.1 ms