Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 AC174776.2-201ENSMUST00000222561 405 ntBASIC4.08□□□□□ -1.76
P20040 AC154623.1-201ENSMUST00000224348 805 ntBASIC4.08□□□□□ -1.76
P20040 AC120153.1-201ENSMUST00000226502 1311 ntBASIC4.08□□□□□ -1.76
P20040 AC151902.1-201ENSMUST00000227800 375 ntBASIC4.08□□□□□ -1.76
P20040 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
P20040 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
P20040 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
P20040 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
P20040 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
P20040 Olfr1216-201ENSMUST00000099800 936 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
P20040 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
P20040 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
P20040 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
P20040 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
P20040 Gm2033-201ENSMUST00000210753 2287 ntBASIC4.07□□□□□ -1.76
P20040 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
P20040 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
P20040 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
P20040 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
P20040 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
P20040 Gm28832-201ENSMUST00000188603 1498 ntTSL 5 BASIC4.07□□□□□ -1.76
P20040 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC4.07□□□□□ -1.76
P20040 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
P20040 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
P20040 Scimp-202ENSMUST00000108534 1080 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
P20040 Gm12285-201ENSMUST00000117347 233 ntBASIC4.07□□□□□ -1.76
P20040 Gm13867-201ENSMUST00000120844 395 ntBASIC4.07□□□□□ -1.76
P20040 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
P20040 Gm15905-201ENSMUST00000137042 298 ntBASIC4.07□□□□□ -1.76
P20040 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC4.07□□□□□ -1.76
P20040 Gm25966-201ENSMUST00000157169 117 ntBASIC4.07□□□□□ -1.76
P20040 Gm24441-201ENSMUST00000157235 281 ntBASIC4.07□□□□□ -1.76
P20040 Gm26098-201ENSMUST00000157247 288 ntBASIC4.07□□□□□ -1.76
P20040 Gm22940-201ENSMUST00000158560 155 ntBASIC4.07□□□□□ -1.76
P20040 Gm17043-201ENSMUST00000164621 1283 ntBASIC4.07□□□□□ -1.76
P20040 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC4.07□□□□□ -1.76
P20040 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
P20040 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
P20040 Gm28385-201ENSMUST00000185671 292 ntBASIC4.07□□□□□ -1.76
P20040 Gm28974-201ENSMUST00000187893 231 ntBASIC4.07□□□□□ -1.76
P20040 Gm29281-201ENSMUST00000188077 381 ntBASIC4.07□□□□□ -1.76
P20040 Gm19280-201ENSMUST00000190191 205 ntBASIC4.07□□□□□ -1.76
P20040 Gm18382-201ENSMUST00000194394 582 ntBASIC4.07□□□□□ -1.76
P20040 Gm18150-201ENSMUST00000195341 645 ntBASIC4.07□□□□□ -1.76
P20040 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC4.07□□□□□ -1.76
P20040 Sult2a7-203ENSMUST00000210034 870 ntTSL 5 BASIC4.07□□□□□ -1.76
P20040 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
P20040 AC164424.1-201ENSMUST00000221690 170 ntBASIC4.07□□□□□ -1.76
P20040 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC4.07□□□□□ -1.76
P20040 AC096628.1-201ENSMUST00000226060 641 ntBASIC4.07□□□□□ -1.76
P20040 Olfr906-201ENSMUST00000045493 936 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
P20040 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
P20040 Olfr1170-201ENSMUST00000099831 951 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
P20040 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
P20040 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
P20040 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
P20040 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
P20040 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
P20040 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
P20040 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC4.07□□□□□ -1.76
P20040 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC4.07□□□□□ -1.76
P20040 AC160130.1-201ENSMUST00000220734 2735 ntBASIC4.07□□□□□ -1.76
P20040 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
P20040 Kcnrg-201ENSMUST00000051184 1766 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
P20040 Gm42681-201ENSMUST00000197999 1611 ntBASIC4.06□□□□□ -1.76
P20040 Hm629797-201ENSMUST00000183645 2398 ntBASIC4.06□□□□□ -1.76
P20040 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
P20040 AC155805.1-201ENSMUST00000222419 3808 ntBASIC4.06□□□□□ -1.76
P20040 Gm7988-201ENSMUST00000196623 2297 ntBASIC4.06□□□□□ -1.76
P20040 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
P20040 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
P20040 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
P20040 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
P20040 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
P20040 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
P20040 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
P20040 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
P20040 Gm11584-201ENSMUST00000120636 325 ntBASIC4.06□□□□□ -1.76
P20040 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC4.06□□□□□ -1.76
P20040 Gm16060-201ENSMUST00000153140 478 ntBASIC4.06□□□□□ -1.76
P20040 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
P20040 Gm26312-201ENSMUST00000157769 165 ntBASIC4.06□□□□□ -1.76
P20040 Gm16114-201ENSMUST00000161930 300 ntBASIC4.06□□□□□ -1.76
P20040 Gm8356-202ENSMUST00000164917 984 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
P20040 Trbv10-201ENSMUST00000168322 289 ntBASIC4.06□□□□□ -1.76
P20040 Gm23799-201ENSMUST00000175559 120 ntBASIC4.06□□□□□ -1.76
P20040 Gm21991-201ENSMUST00000180006 508 ntBASIC4.06□□□□□ -1.76
P20040 Gm26828-201ENSMUST00000180640 172 ntBASIC4.06□□□□□ -1.76
P20040 Gm27976-201ENSMUST00000183635 162 ntBASIC4.06□□□□□ -1.76
P20040 Gm27315-201ENSMUST00000183977 154 ntBASIC4.06□□□□□ -1.76
P20040 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
P20040 Gm21742-201ENSMUST00000189352 548 ntBASIC4.06□□□□□ -1.76
P20040 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
P20040 Gm43237-201ENSMUST00000196835 1044 ntBASIC4.06□□□□□ -1.76
P20040 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
P20040 Gm18791-201ENSMUST00000204611 726 ntBASIC4.06□□□□□ -1.76
P20040 AC121986.1-201ENSMUST00000218588 781 ntBASIC4.06□□□□□ -1.76
P20040 AC131745.1-201ENSMUST00000223660 330 ntBASIC4.06□□□□□ -1.76
P20040 Ap3m1-208ENSMUST00000224016 764 ntBASIC4.06□□□□□ -1.76
P20040 Ear-ps9-202ENSMUST00000226796 245 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms