Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Clec2g-202ENSMUST00000075789 729 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Sdc1P18828 Olfr107-201ENSMUST00000077008 1033 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Sdc1P18828 Gm6462-201ENSMUST00000081488 304 ntBASIC3.7□□□□□ -1.82
Sdc1P18828 Olfr310-201ENSMUST00000081918 1082 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Sdc1P18828 Gm22684-201ENSMUST00000082849 132 ntBASIC3.7□□□□□ -1.82
Sdc1P18828 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC3.7□□□□□ -1.82
Sdc1P18828 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC3.7□□□□□ -1.82
Sdc1P18828 Gm19210-201ENSMUST00000199562 1350 ntBASIC3.7□□□□□ -1.82
Sdc1P18828 Gm43059-201ENSMUST00000202437 1388 ntBASIC3.7□□□□□ -1.82
Sdc1P18828 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Sdc1P18828 Gm38065-201ENSMUST00000193147 3492 ntBASIC3.7□□□□□ -1.82
Sdc1P18828 Gm43508-201ENSMUST00000197251 3783 ntBASIC3.7□□□□□ -1.82
Sdc1P18828 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Sdc1P18828 AC124446.1-201ENSMUST00000221027 2644 ntBASIC3.7□□□□□ -1.82
Sdc1P18828 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC3.7□□□□□ -1.82
Sdc1P18828 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
Sdc1P18828 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Sdc1P18828 Gm38260-201ENSMUST00000193573 3995 ntBASIC3.7□□□□□ -1.82
Sdc1P18828 Gm7646-201ENSMUST00000198590 1346 ntBASIC3.7□□□□□ -1.82
Sdc1P18828 Olfr1288-202ENSMUST00000214816 1326 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Sdc1P18828 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC3.69□□□□□ -1.82
Sdc1P18828 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Sdc1P18828 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
Sdc1P18828 Gm36962-201ENSMUST00000192114 1761 ntBASIC3.69□□□□□ -1.82
Sdc1P18828 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
Sdc1P18828 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Sdc1P18828 Fbxw23-202ENSMUST00000198480 1388 ntBASIC3.69□□□□□ -1.82
Sdc1P18828 Gm12988-201ENSMUST00000119054 478 ntBASIC3.69□□□□□ -1.82
Sdc1P18828 Gm6305-201ENSMUST00000121027 1012 ntBASIC3.69□□□□□ -1.82
Sdc1P18828 Gm11848-201ENSMUST00000121207 973 ntBASIC3.69□□□□□ -1.82
Sdc1P18828 Gm24295-201ENSMUST00000158298 131 ntBASIC3.69□□□□□ -1.82
Sdc1P18828 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Sdc1P18828 Samd15-201ENSMUST00000169669 1194 ntBASIC3.69□□□□□ -1.82
Sdc1P18828 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC3.69□□□□□ -1.82
Sdc1P18828 Gm6214-201ENSMUST00000178845 541 ntBASIC3.69□□□□□ -1.82
Sdc1P18828 Lockd-204ENSMUST00000184991 243 ntTSL 5 BASIC3.69□□□□□ -1.82
Sdc1P18828 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC3.69□□□□□ -1.82
Sdc1P18828 Igkv4-75-201ENSMUST00000197204 359 ntBASIC3.69□□□□□ -1.82
Sdc1P18828 Igkv12-67-201ENSMUST00000197806 354 ntBASIC3.69□□□□□ -1.82
Sdc1P18828 Gm8891-201ENSMUST00000198546 832 ntBASIC3.69□□□□□ -1.82
Sdc1P18828 Gm7721-201ENSMUST00000200446 546 ntBASIC3.69□□□□□ -1.82
Sdc1P18828 Gm43440-201ENSMUST00000201957 729 ntBASIC3.69□□□□□ -1.82
Sdc1P18828 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC3.69□□□□□ -1.82
Sdc1P18828 Olfr1492-ps1-201ENSMUST00000207071 865 ntBASIC3.69□□□□□ -1.82
Sdc1P18828 AC156504.1-201ENSMUST00000214608 157 ntBASIC3.69□□□□□ -1.82
Sdc1P18828 Olfr153-201ENSMUST00000217113 1258 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Sdc1P18828 Olfr603-202ENSMUST00000218246 1021 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Sdc1P18828 AL606513.1-201ENSMUST00000225369 579 ntBASIC3.69□□□□□ -1.82
Sdc1P18828 AC134864.1-201ENSMUST00000226326 511 ntBASIC3.69□□□□□ -1.82
Sdc1P18828 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Sdc1P18828 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Sdc1P18828 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Sdc1P18828 Olfr603-201ENSMUST00000071844 939 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Sdc1P18828 Ccdc68-202ENSMUST00000080050 1235 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
Sdc1P18828 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Sdc1P18828 Gm36951-201ENSMUST00000193840 2687 ntBASIC3.69□□□□□ -1.82
Sdc1P18828 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Sdc1P18828 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Sdc1P18828 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Sdc1P18828 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
Sdc1P18828 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
Sdc1P18828 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
Sdc1P18828 AC149294.7-201ENSMUST00000227475 1432 ntBASIC3.69□□□□□ -1.82
Sdc1P18828 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
Sdc1P18828 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Sdc1P18828 Gm38240-201ENSMUST00000195110 2487 ntBASIC3.68□□□□□ -1.82
Sdc1P18828 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
Sdc1P18828 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Sdc1P18828 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Sdc1P18828 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Sdc1P18828 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Sdc1P18828 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Sdc1P18828 Gm23942-201ENSMUST00000101956 107 ntBASIC3.68□□□□□ -1.82
Sdc1P18828 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Sdc1P18828 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Sdc1P18828 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Sdc1P18828 Gm24709-201ENSMUST00000104123 132 ntBASIC3.68□□□□□ -1.82
Sdc1P18828 Gm14995-201ENSMUST00000117135 391 ntBASIC3.68□□□□□ -1.82
Sdc1P18828 Gm12482-201ENSMUST00000120435 630 ntBASIC3.68□□□□□ -1.82
Sdc1P18828 Gm13788-201ENSMUST00000120767 601 ntBASIC3.68□□□□□ -1.82
Sdc1P18828 Gm13557-201ENSMUST00000120771 382 ntBASIC3.68□□□□□ -1.82
Sdc1P18828 Gm12224-202ENSMUST00000127107 726 ntTSL 3 BASIC3.68□□□□□ -1.82
Sdc1P18828 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Sdc1P18828 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC3.68□□□□□ -1.82
Sdc1P18828 Gm25606-201ENSMUST00000158363 95 ntBASIC3.68□□□□□ -1.82
Sdc1P18828 Gm10177-201ENSMUST00000160052 444 ntBASIC3.68□□□□□ -1.82
Sdc1P18828 Gm16107-201ENSMUST00000162523 862 ntBASIC3.68□□□□□ -1.82
Sdc1P18828 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Sdc1P18828 Gm9890-201ENSMUST00000171867 537 ntBASIC3.68□□□□□ -1.82
Sdc1P18828 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Sdc1P18828 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC3.68□□□□□ -1.82
Sdc1P18828 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Sdc1P18828 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
Sdc1P18828 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
Sdc1P18828 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
Sdc1P18828 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
Sdc1P18828 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
Sdc1P18828 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
Sdc1P18828 Mir6539-201ENSMUST00000183732 110 ntBASIC3.68□□□□□ -1.82
Sdc1P18828 Gm27427-201ENSMUST00000185134 193 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms