Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Cdx1P18111 Gm37875-201ENSMUST00000192101 1498 ntTSL 5 BASIC3.92□□□□□ -1.78
Cdx1P18111 B930086L07Rik-201ENSMUST00000209529 3738 ntBASIC3.92□□□□□ -1.78
Cdx1P18111 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Cdx1P18111 Gm29325-201ENSMUST00000190705 2528 ntBASIC3.91□□□□□ -1.78
Cdx1P18111 Gm44283-201ENSMUST00000204461 3950 ntBASIC3.91□□□□□ -1.78
Cdx1P18111 Gm13340-201ENSMUST00000117219 1545 ntBASIC3.91□□□□□ -1.78
Cdx1P18111 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Cdx1P18111 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Cdx1P18111 Gm42484-201ENSMUST00000196075 2104 ntBASIC3.91□□□□□ -1.78
Cdx1P18111 AC167420.1-201ENSMUST00000222999 2121 ntBASIC3.91□□□□□ -1.78
Cdx1P18111 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Cdx1P18111 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC3.91□□□□□ -1.78
Cdx1P18111 Olfr1242-204ENSMUST00000216001 2569 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Cdx1P18111 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Cdx1P18111 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Cdx1P18111 Gm23274-201ENSMUST00000104056 130 ntBASIC3.91□□□□□ -1.78
Cdx1P18111 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Cdx1P18111 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC3.91□□□□□ -1.78
Cdx1P18111 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC3.91□□□□□ -1.78
Cdx1P18111 Gm14909-201ENSMUST00000117853 351 ntBASIC3.91□□□□□ -1.78
Cdx1P18111 Gm12039-201ENSMUST00000118219 180 ntBASIC3.91□□□□□ -1.78
Cdx1P18111 Gm12564-201ENSMUST00000119860 321 ntBASIC3.91□□□□□ -1.78
Cdx1P18111 Gm14649-201ENSMUST00000121814 324 ntBASIC3.91□□□□□ -1.78
Cdx1P18111 Gm23211-201ENSMUST00000122717 308 ntBASIC3.91□□□□□ -1.78
Cdx1P18111 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC3.91□□□□□ -1.78
Cdx1P18111 Gm7846-201ENSMUST00000145844 274 ntBASIC3.91□□□□□ -1.78
Cdx1P18111 Gm8988-201ENSMUST00000155015 1240 ntBASIC3.91□□□□□ -1.78
Cdx1P18111 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC3.91□□□□□ -1.78
Cdx1P18111 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Cdx1P18111 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
Cdx1P18111 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Cdx1P18111 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Cdx1P18111 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC3.91□□□□□ -1.78
Cdx1P18111 Mir7056-201ENSMUST00000183776 59 ntBASIC3.91□□□□□ -1.78
Cdx1P18111 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC3.91□□□□□ -1.78
Cdx1P18111 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC3.91□□□□□ -1.78
Cdx1P18111 Gm28385-201ENSMUST00000185671 292 ntBASIC3.91□□□□□ -1.78
Cdx1P18111 Gm9775-201ENSMUST00000189402 331 ntBASIC3.91□□□□□ -1.78
Cdx1P18111 Gm37631-201ENSMUST00000192275 364 ntBASIC3.91□□□□□ -1.78
Cdx1P18111 Gm34176-201ENSMUST00000192621 474 ntBASIC3.91□□□□□ -1.78
Cdx1P18111 Gm37421-201ENSMUST00000193088 132 ntBASIC3.91□□□□□ -1.78
Cdx1P18111 Gm42830-201ENSMUST00000196642 313 ntBASIC3.91□□□□□ -1.78
Cdx1P18111 Gm44919-201ENSMUST00000208587 1073 ntBASIC3.91□□□□□ -1.78
Cdx1P18111 Gm45236-201ENSMUST00000208632 229 ntBASIC3.91□□□□□ -1.78
Cdx1P18111 Olfr858-ps1-201ENSMUST00000212591 930 ntBASIC3.91□□□□□ -1.78
Cdx1P18111 Gm7688-201ENSMUST00000212857 337 ntBASIC3.91□□□□□ -1.78
Cdx1P18111 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Cdx1P18111 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC3.91□□□□□ -1.78
Cdx1P18111 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC3.91□□□□□ -1.78
Cdx1P18111 AC132336.1-201ENSMUST00000222844 1740 ntBASIC3.91□□□□□ -1.78
Cdx1P18111 1700129C05Rik-201ENSMUST00000022548 1067 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
Cdx1P18111 AC165953.1-201ENSMUST00000226386 357 ntBASIC3.91□□□□□ -1.78
Cdx1P18111 AC102815.1-201ENSMUST00000226662 1061 ntBASIC3.91□□□□□ -1.78
Cdx1P18111 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Cdx1P18111 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Cdx1P18111 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
Cdx1P18111 Olfr968-201ENSMUST00000075928 1027 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Cdx1P18111 Gm23514-201ENSMUST00000082827 130 ntBASIC3.91□□□□□ -1.78
Cdx1P18111 Mir30b-201ENSMUST00000083542 96 ntBASIC3.91□□□□□ -1.78
Cdx1P18111 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Cdx1P18111 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC3.91□□□□□ -1.78
Cdx1P18111 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Cdx1P18111 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Cdx1P18111 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
Cdx1P18111 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
Cdx1P18111 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Cdx1P18111 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Cdx1P18111 Gm43658-201ENSMUST00000202348 4176 ntBASIC3.91□□□□□ -1.78
Cdx1P18111 Gm44288-201ENSMUST00000205061 2795 ntBASIC3.91□□□□□ -1.78
Cdx1P18111 Gm26814-201ENSMUST00000181178 4149 ntBASIC3.9□□□□□ -1.78
Cdx1P18111 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
Cdx1P18111 Cyp2c70-201ENSMUST00000051846 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Cdx1P18111 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Cdx1P18111 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Cdx1P18111 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Cdx1P18111 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Cdx1P18111 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Cdx1P18111 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Cdx1P18111 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Cdx1P18111 Gm14786-201ENSMUST00000117127 944 ntBASIC3.9□□□□□ -1.79
Cdx1P18111 Gm12734-201ENSMUST00000120228 948 ntBASIC3.9□□□□□ -1.79
Cdx1P18111 Gm13460-201ENSMUST00000121274 353 ntBASIC3.9□□□□□ -1.79
Cdx1P18111 Gm24371-201ENSMUST00000122662 267 ntBASIC3.9□□□□□ -1.79
Cdx1P18111 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC3.9□□□□□ -1.79
Cdx1P18111 Gm24965-201ENSMUST00000157922 106 ntBASIC3.9□□□□□ -1.79
Cdx1P18111 Gm23546-201ENSMUST00000158211 137 ntBASIC3.9□□□□□ -1.79
Cdx1P18111 Gm25520-201ENSMUST00000158389 118 ntBASIC3.9□□□□□ -1.79
Cdx1P18111 Gm3727-201ENSMUST00000168458 995 ntAPPRIS P5 TSL 5 BASIC3.9□□□□□ -1.79
Cdx1P18111 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
Cdx1P18111 Gm20519-201ENSMUST00000173684 359 ntBASIC3.9□□□□□ -1.79
Cdx1P18111 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Cdx1P18111 Gm27543-201ENSMUST00000183562 177 ntBASIC3.9□□□□□ -1.79
Cdx1P18111 Mir7012-201ENSMUST00000183900 64 ntBASIC3.9□□□□□ -1.79
Cdx1P18111 Mrgprb9-ps-201ENSMUST00000188739 892 ntBASIC3.9□□□□□ -1.79
Cdx1P18111 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Cdx1P18111 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Cdx1P18111 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC3.9□□□□□ -1.79
Cdx1P18111 Gm9173-201ENSMUST00000198054 400 ntBASIC3.9□□□□□ -1.79
Cdx1P18111 1110060G06Rik-201ENSMUST00000200372 499 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms