Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Olfr150-202ENSMUST00000217257 1867 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Col1a1P11087 Gm25833-201ENSMUST00000104137 133 ntBASIC5.08□□□□□ -1.6
Col1a1P11087 Gm15981-201ENSMUST00000119196 457 ntBASIC5.08□□□□□ -1.6
Col1a1P11087 Gm23959-201ENSMUST00000157208 324 ntBASIC5.08□□□□□ -1.6
Col1a1P11087 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col1a1P11087 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC5.08□□□□□ -1.6
Col1a1P11087 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col1a1P11087 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Col1a1P11087 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col1a1P11087 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Col1a1P11087 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Col1a1P11087 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC5.08□□□□□ -1.6
Col1a1P11087 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col1a1P11087 Olfr1162-201ENSMUST00000099837 945 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Col1a1P11087 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Col1a1P11087 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Col1a1P11087 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
Col1a1P11087 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col1a1P11087 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col1a1P11087 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col1a1P11087 Gm7233-201ENSMUST00000168619 1761 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Col1a1P11087 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Col1a1P11087 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Col1a1P11087 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Col1a1P11087 Gm37045-201ENSMUST00000192016 2463 ntBASIC5.08□□□□□ -1.6
Col1a1P11087 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Col1a1P11087 Gm26036-201ENSMUST00000158149 144 ntBASIC5.07□□□□□ -1.6
Col1a1P11087 Gm24730-201ENSMUST00000158228 117 ntBASIC5.07□□□□□ -1.6
Col1a1P11087 Gm17149-201ENSMUST00000164712 375 ntBASIC5.07□□□□□ -1.6
Col1a1P11087 Vmn2r-ps134-201ENSMUST00000176907 1046 ntBASIC5.07□□□□□ -1.6
Col1a1P11087 Gm37601-201ENSMUST00000194922 394 ntBASIC5.07□□□□□ -1.6
Col1a1P11087 Gm44134-201ENSMUST00000203064 661 ntTSL 2 BASIC5.07□□□□□ -1.6
Col1a1P11087 Gm18377-201ENSMUST00000215141 607 ntBASIC5.07□□□□□ -1.6
Col1a1P11087 Gm4036-201ENSMUST00000220842 626 ntBASIC5.07□□□□□ -1.6
Col1a1P11087 AC154239.2-201ENSMUST00000227859 233 ntBASIC5.07□□□□□ -1.6
Col1a1P11087 AC100733.1-201ENSMUST00000228494 407 ntBASIC5.07□□□□□ -1.6
Col1a1P11087 Gm22868-201ENSMUST00000083955 164 ntBASIC5.07□□□□□ -1.6
Col1a1P11087 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
Col1a1P11087 Gm37397-201ENSMUST00000194579 2842 ntBASIC5.07□□□□□ -1.6
Col1a1P11087 Gm45804-201ENSMUST00000212137 3435 ntBASIC5.07□□□□□ -1.6
Col1a1P11087 AC149588.1-201ENSMUST00000228274 3745 ntBASIC5.07□□□□□ -1.6
Col1a1P11087 Gm43870-201ENSMUST00000205102 4369 ntBASIC5.07□□□□□ -1.6
Col1a1P11087 Amd2-201ENSMUST00000080898 3218 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Col1a1P11087 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Col1a1P11087 Gm3972-201ENSMUST00000173960 2861 ntBASIC5.07□□□□□ -1.6
Col1a1P11087 Nfib-202ENSMUST00000064770 8429 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col1a1P11087 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col1a1P11087 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col1a1P11087 Gm26743-201ENSMUST00000180913 1726 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col1a1P11087 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col1a1P11087 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col1a1P11087 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC5.07□□□□□ -1.6
Col1a1P11087 Gm26418-201ENSMUST00000104275 137 ntBASIC5.07□□□□□ -1.6
Col1a1P11087 Gm12335-201ENSMUST00000119738 327 ntBASIC5.07□□□□□ -1.6
Col1a1P11087 Gm25572-201ENSMUST00000157527 172 ntBASIC5.07□□□□□ -1.6
Col1a1P11087 Ppp1r2-ps9-201ENSMUST00000173100 549 ntBASIC5.07□□□□□ -1.6
Col1a1P11087 Gm23365-201ENSMUST00000175019 125 ntBASIC5.07□□□□□ -1.6
Col1a1P11087 Gm25960-201ENSMUST00000175110 125 ntBASIC5.07□□□□□ -1.6
Col1a1P11087 Gm44453-201ENSMUST00000175161 126 ntBASIC5.07□□□□□ -1.6
Col1a1P11087 Mir1251-201ENSMUST00000175486 84 ntBASIC5.07□□□□□ -1.6
Col1a1P11087 Gm22120-201ENSMUST00000175590 70 ntBASIC5.07□□□□□ -1.6
Col1a1P11087 Gm25195-201ENSMUST00000177656 126 ntBASIC5.07□□□□□ -1.6
Col1a1P11087 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC5.07□□□□□ -1.6
Col1a1P11087 Gm37791-201ENSMUST00000195081 286 ntBASIC5.07□□□□□ -1.6
Col1a1P11087 Gm43037-201ENSMUST00000196808 250 ntBASIC5.07□□□□□ -1.6
Col1a1P11087 Gm43044-201ENSMUST00000198091 379 ntBASIC5.07□□□□□ -1.6
Col1a1P11087 Gm44389-201ENSMUST00000203795 182 ntBASIC5.07□□□□□ -1.6
Col1a1P11087 AC161456.1-201ENSMUST00000206771 887 ntBASIC5.07□□□□□ -1.6
Col1a1P11087 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC5.07□□□□□ -1.6
Col1a1P11087 Olfr724-202ENSMUST00000213390 1152 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Col1a1P11087 AL590503.1-201ENSMUST00000222053 321 ntBASIC5.07□□□□□ -1.6
Col1a1P11087 AC150560.2-201ENSMUST00000227208 171 ntBASIC5.07□□□□□ -1.6
Col1a1P11087 AC131997.2-201ENSMUST00000227452 362 ntBASIC5.07□□□□□ -1.6
Col1a1P11087 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Col1a1P11087 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col1a1P11087 Gm43577-201ENSMUST00000197090 3344 ntBASIC5.06□□□□□ -1.6
Col1a1P11087 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
Col1a1P11087 Gm6162-201ENSMUST00000194870 2930 ntBASIC5.06□□□□□ -1.6
Col1a1P11087 Gm37569-201ENSMUST00000192111 1722 ntBASIC5.06□□□□□ -1.6
Col1a1P11087 Slc7a12-201ENSMUST00000037321 1741 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col1a1P11087 Gm23271-201ENSMUST00000104052 124 ntBASIC5.06□□□□□ -1.6
Col1a1P11087 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Col1a1P11087 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col1a1P11087 Gm6754-201ENSMUST00000117124 913 ntBASIC5.06□□□□□ -1.6
Col1a1P11087 Gm15014-201ENSMUST00000120742 258 ntBASIC5.06□□□□□ -1.6
Col1a1P11087 Gm12693-201ENSMUST00000121965 483 ntBASIC5.06□□□□□ -1.6
Col1a1P11087 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC5.06□□□□□ -1.6
Col1a1P11087 1700109I08Rik-201ENSMUST00000185680 396 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Col1a1P11087 Gm38061-201ENSMUST00000192490 365 ntBASIC5.06□□□□□ -1.6
Col1a1P11087 Gm37501-201ENSMUST00000192830 691 ntBASIC5.06□□□□□ -1.6
Col1a1P11087 Gm45796-201ENSMUST00000212483 114 ntBASIC5.06□□□□□ -1.6
Col1a1P11087 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC5.06□□□□□ -1.6
Col1a1P11087 Mir193a-201ENSMUST00000083461 66 ntBASIC5.06□□□□□ -1.6
Col1a1P11087 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Col1a1P11087 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col1a1P11087 BC051142-201ENSMUST00000078615 1899 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col1a1P11087 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col1a1P11087 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col1a1P11087 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col1a1P11087 Zscan4a-201ENSMUST00000210573 2279 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms