Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm23623-201ENSMUST00000082461 107 ntBASIC5.28□□□□□ -1.56
Hoxd3P09027 Gm23939-201ENSMUST00000082880 133 ntBASIC5.28□□□□□ -1.56
Hoxd3P09027 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Hoxd3P09027 3110099E03Rik-202ENSMUST00000134580 2644 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Hoxd3P09027 Gm43728-201ENSMUST00000198817 2622 ntBASIC5.28□□□□□ -1.56
Hoxd3P09027 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Hoxd3P09027 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC5.28□□□□□ -1.56
Hoxd3P09027 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
Hoxd3P09027 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC5.28□□□□□ -1.56
Hoxd3P09027 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Hoxd3P09027 Vmn2r118-201ENSMUST00000168440 2562 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Hoxd3P09027 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Hoxd3P09027 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Hoxd3P09027 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Hoxd3P09027 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Hoxd3P09027 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Hoxd3P09027 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Hoxd3P09027 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Hoxd3P09027 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC5.28□□□□□ -1.56
Hoxd3P09027 Gm20706-201ENSMUST00000175985 2023 ntBASIC5.28□□□□□ -1.56
Hoxd3P09027 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Hoxd3P09027 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Hoxd3P09027 Gm37142-201ENSMUST00000193718 3110 ntBASIC5.28□□□□□ -1.56
Hoxd3P09027 Gm43363-201ENSMUST00000201590 2647 ntBASIC5.27□□□□□ -1.57
Hoxd3P09027 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Hoxd3P09027 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Hoxd3P09027 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Hoxd3P09027 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Hoxd3P09027 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC5.27□□□□□ -1.57
Hoxd3P09027 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Hoxd3P09027 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC5.27□□□□□ -1.57
Hoxd3P09027 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Hoxd3P09027 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Hoxd3P09027 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Hoxd3P09027 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Hoxd3P09027 Alg11-202ENSMUST00000110737 4833 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Hoxd3P09027 Frmpd4-203ENSMUST00000112147 8607 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
Hoxd3P09027 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Hoxd3P09027 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Hoxd3P09027 Ighv1-26-201ENSMUST00000103510 351 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Hoxd3P09027 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC5.27□□□□□ -1.57
Hoxd3P09027 Rps12-ps7-201ENSMUST00000117169 385 ntBASIC5.27□□□□□ -1.57
Hoxd3P09027 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC5.27□□□□□ -1.57
Hoxd3P09027 Gm15349-201ENSMUST00000121154 204 ntBASIC5.27□□□□□ -1.57
Hoxd3P09027 Gm12540-201ENSMUST00000121938 319 ntBASIC5.27□□□□□ -1.57
Hoxd3P09027 Gm16248-201ENSMUST00000124238 243 ntBASIC5.27□□□□□ -1.57
Hoxd3P09027 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC5.27□□□□□ -1.57
Hoxd3P09027 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC5.27□□□□□ -1.57
Hoxd3P09027 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC5.27□□□□□ -1.57
Hoxd3P09027 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC5.27□□□□□ -1.57
Hoxd3P09027 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Hoxd3P09027 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC5.27□□□□□ -1.57
Hoxd3P09027 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
Hoxd3P09027 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC5.27□□□□□ -1.57
Hoxd3P09027 Gm16102-201ENSMUST00000160955 420 ntBASIC5.27□□□□□ -1.57
Hoxd3P09027 Gm16298-201ENSMUST00000161107 420 ntBASIC5.27□□□□□ -1.57
Hoxd3P09027 Gm7953-201ENSMUST00000168278 469 ntBASIC5.27□□□□□ -1.57
Hoxd3P09027 Gm4202-201ENSMUST00000169025 733 ntBASIC5.27□□□□□ -1.57
Hoxd3P09027 Mir199b-201ENSMUST00000175066 110 ntBASIC5.27□□□□□ -1.57
Hoxd3P09027 Gm23164-201ENSMUST00000175084 111 ntBASIC5.27□□□□□ -1.57
Hoxd3P09027 Gm24155-201ENSMUST00000175259 110 ntBASIC5.27□□□□□ -1.57
Hoxd3P09027 Gm22290-201ENSMUST00000177655 107 ntBASIC5.27□□□□□ -1.57
Hoxd3P09027 Gm22583-201ENSMUST00000178031 107 ntBASIC5.27□□□□□ -1.57
Hoxd3P09027 Gm9830-201ENSMUST00000178509 357 ntBASIC5.27□□□□□ -1.57
Hoxd3P09027 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Hoxd3P09027 Gm27972-201ENSMUST00000184720 137 ntBASIC5.27□□□□□ -1.57
Hoxd3P09027 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Hoxd3P09027 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Hoxd3P09027 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC5.27□□□□□ -1.57
Hoxd3P09027 Gm40348-201ENSMUST00000199648 452 ntTSL 3 BASIC5.27□□□□□ -1.57
Hoxd3P09027 Gm42729-201ENSMUST00000201770 2930 ntBASIC5.27□□□□□ -1.57
Hoxd3P09027 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC5.27□□□□□ -1.57
Hoxd3P09027 Gm7351-201ENSMUST00000210745 580 ntBASIC5.27□□□□□ -1.57
Hoxd3P09027 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC5.27□□□□□ -1.57
Hoxd3P09027 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Hoxd3P09027 AC079644.2-201ENSMUST00000220581 322 ntBASIC5.27□□□□□ -1.57
Hoxd3P09027 AC125064.1-201ENSMUST00000225801 295 ntBASIC5.27□□□□□ -1.57
Hoxd3P09027 AC107711.2-203ENSMUST00000227827 762 ntBASIC5.27□□□□□ -1.57
Hoxd3P09027 AC133076.1-201ENSMUST00000228074 484 ntBASIC5.27□□□□□ -1.57
Hoxd3P09027 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC5.27□□□□□ -1.57
Hoxd3P09027 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Hoxd3P09027 Gm22973-201ENSMUST00000083298 191 ntBASIC5.27□□□□□ -1.57
Hoxd3P09027 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Hoxd3P09027 Slc38a6-208ENSMUST00000153941 3927 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Hoxd3P09027 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Hoxd3P09027 Gm43638-201ENSMUST00000201519 2297 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Hoxd3P09027 AC122346.1-201ENSMUST00000225266 3732 ntBASIC5.27□□□□□ -1.57
Hoxd3P09027 Gm14615-201ENSMUST00000117575 1816 ntBASIC5.27□□□□□ -1.57
Hoxd3P09027 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Hoxd3P09027 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Hoxd3P09027 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Hoxd3P09027 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Hoxd3P09027 Arhgap32-203ENSMUST00000174641 13568 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Hoxd3P09027 Saa4-201ENSMUST00000006952 2094 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Hoxd3P09027 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC5.27□□□□□ -1.57
Hoxd3P09027 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Hoxd3P09027 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
Hoxd3P09027 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC5.27□□□□□ -1.57
Hoxd3P09027 Gm5702-201ENSMUST00000185629 2469 ntBASIC5.26□□□□□ -1.57
Hoxd3P09027 Gm9700-201ENSMUST00000193786 1617 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms