Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm2628-201ENSMUST00000218019 426 ntBASIC5.64□□□□□ -1.51
Nkx6-1Q99MA9 AC132384.9-201ENSMUST00000218085 277 ntBASIC5.64□□□□□ -1.51
Nkx6-1Q99MA9 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Nkx6-1Q99MA9 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC5.64□□□□□ -1.51
Nkx6-1Q99MA9 AC116460.1-201ENSMUST00000219040 313 ntBASIC5.64□□□□□ -1.51
Nkx6-1Q99MA9 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC5.64□□□□□ -1.51
Nkx6-1Q99MA9 AC115750.1-201ENSMUST00000220441 567 ntBASIC5.64□□□□□ -1.51
Nkx6-1Q99MA9 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC5.64□□□□□ -1.51
Nkx6-1Q99MA9 AC153662.1-201ENSMUST00000222220 270 ntBASIC5.64□□□□□ -1.51
Nkx6-1Q99MA9 AC173481.1-201ENSMUST00000223351 270 ntBASIC5.64□□□□□ -1.51
Nkx6-1Q99MA9 CT025579.3-201ENSMUST00000224543 451 ntBASIC5.64□□□□□ -1.51
Nkx6-1Q99MA9 AC192333.1-201ENSMUST00000224573 376 ntBASIC5.64□□□□□ -1.51
Nkx6-1Q99MA9 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
Nkx6-1Q99MA9 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Nkx6-1Q99MA9 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Nkx6-1Q99MA9 Ptprd-201ENSMUST00000050757 4698 ntTSL 5 BASIC5.64□□□□□ -1.51
Nkx6-1Q99MA9 Gm23737-201ENSMUST00000082547 159 ntBASIC5.64□□□□□ -1.51
Nkx6-1Q99MA9 Gm26111-201ENSMUST00000083969 106 ntBASIC5.64□□□□□ -1.51
Nkx6-1Q99MA9 Olfr678-201ENSMUST00000098160 942 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Nkx6-1Q99MA9 Fus-202ENSMUST00000079045 2623 ntBASIC5.64□□□□□ -1.51
Nkx6-1Q99MA9 Gm44708-201ENSMUST00000205580 2237 ntBASIC5.64□□□□□ -1.51
Nkx6-1Q99MA9 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Nkx6-1Q99MA9 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Nkx6-1Q99MA9 Fap-209ENSMUST00000174448 2271 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Nkx6-1Q99MA9 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Nkx6-1Q99MA9 Gm14326-202ENSMUST00000108930 1807 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
Nkx6-1Q99MA9 Gm6215-201ENSMUST00000119297 1386 ntBASIC5.64□□□□□ -1.51
Nkx6-1Q99MA9 Gm7905-201ENSMUST00000119933 1386 ntBASIC5.64□□□□□ -1.51
Nkx6-1Q99MA9 Gm6207-201ENSMUST00000120075 1386 ntBASIC5.64□□□□□ -1.51
Nkx6-1Q99MA9 Gm6228-201ENSMUST00000178856 1386 ntBASIC5.64□□□□□ -1.51
Nkx6-1Q99MA9 Gm6221-201ENSMUST00000180064 1386 ntBASIC5.64□□□□□ -1.51
Nkx6-1Q99MA9 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Nkx6-1Q99MA9 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Nkx6-1Q99MA9 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Nkx6-1Q99MA9 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
Nkx6-1Q99MA9 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Nkx6-1Q99MA9 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Nkx6-1Q99MA9 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Nkx6-1Q99MA9 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Nkx6-1Q99MA9 AC154406.1-201ENSMUST00000215220 2529 ntBASIC5.64□□□□□ -1.51
Nkx6-1Q99MA9 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Nkx6-1Q99MA9 Gm38036-201ENSMUST00000194586 3564 ntBASIC5.63□□□□□ -1.51
Nkx6-1Q99MA9 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Nkx6-1Q99MA9 Gm20276-201ENSMUST00000216122 2648 ntBASIC5.63□□□□□ -1.51
Nkx6-1Q99MA9 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Nkx6-1Q99MA9 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
Nkx6-1Q99MA9 Prr11-201ENSMUST00000051395 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Nkx6-1Q99MA9 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Nkx6-1Q99MA9 Osbpl9-214ENSMUST00000160774 2765 ntTSL 5 BASIC5.63□□□□□ -1.51
Nkx6-1Q99MA9 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Nkx6-1Q99MA9 Gm16751-201ENSMUST00000142212 1685 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Nkx6-1Q99MA9 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Nkx6-1Q99MA9 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Nkx6-1Q99MA9 Gm8267-201ENSMUST00000165003 1751 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Nkx6-1Q99MA9 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
Nkx6-1Q99MA9 Fbln5-203ENSMUST00000222587 2371 ntTSL 5 BASIC5.63□□□□□ -1.51
Nkx6-1Q99MA9 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Nkx6-1Q99MA9 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Nkx6-1Q99MA9 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Nkx6-1Q99MA9 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Nkx6-1Q99MA9 Gm43745-201ENSMUST00000198085 1883 ntBASIC5.63□□□□□ -1.51
Nkx6-1Q99MA9 Gm24273-201ENSMUST00000102332 164 ntBASIC5.63□□□□□ -1.51
Nkx6-1Q99MA9 Snord70-201ENSMUST00000104157 87 ntBASIC5.63□□□□□ -1.51
Nkx6-1Q99MA9 Gm13193-201ENSMUST00000117275 225 ntBASIC5.63□□□□□ -1.51
Nkx6-1Q99MA9 Gm12685-201ENSMUST00000121702 214 ntBASIC5.63□□□□□ -1.51
Nkx6-1Q99MA9 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Nkx6-1Q99MA9 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC5.63□□□□□ -1.51
Nkx6-1Q99MA9 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC5.63□□□□□ -1.51
Nkx6-1Q99MA9 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Nkx6-1Q99MA9 1700061F12Rik-201ENSMUST00000132414 876 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Nkx6-1Q99MA9 Gm15970-201ENSMUST00000160623 834 ntBASIC5.63□□□□□ -1.51
Nkx6-1Q99MA9 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Nkx6-1Q99MA9 Gm20519-201ENSMUST00000173684 359 ntBASIC5.63□□□□□ -1.51
Nkx6-1Q99MA9 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Nkx6-1Q99MA9 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC5.63□□□□□ -1.51
Nkx6-1Q99MA9 Mir6541-201ENSMUST00000183649 110 ntBASIC5.63□□□□□ -1.51
Nkx6-1Q99MA9 Gm27599-201ENSMUST00000183758 174 ntBASIC5.63□□□□□ -1.51
Nkx6-1Q99MA9 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC5.63□□□□□ -1.51
Nkx6-1Q99MA9 Gm37889-201ENSMUST00000194174 251 ntBASIC5.63□□□□□ -1.51
Nkx6-1Q99MA9 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC5.63□□□□□ -1.51
Nkx6-1Q99MA9 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC5.63□□□□□ -1.51
Nkx6-1Q99MA9 Gm44002-201ENSMUST00000205134 594 ntBASIC5.63□□□□□ -1.51
Nkx6-1Q99MA9 Gm45700-201ENSMUST00000205866 347 ntBASIC5.63□□□□□ -1.51
Nkx6-1Q99MA9 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC5.63□□□□□ -1.51
Nkx6-1Q99MA9 Gm44654-201ENSMUST00000208052 329 ntBASIC5.63□□□□□ -1.51
Nkx6-1Q99MA9 Gm4587-201ENSMUST00000209135 637 ntBASIC5.63□□□□□ -1.51
Nkx6-1Q99MA9 Gm45596-201ENSMUST00000209279 434 ntBASIC5.63□□□□□ -1.51
Nkx6-1Q99MA9 Gm45742-201ENSMUST00000212400 433 ntBASIC5.63□□□□□ -1.51
Nkx6-1Q99MA9 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC5.63□□□□□ -1.51
Nkx6-1Q99MA9 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC5.63□□□□□ -1.51
Nkx6-1Q99MA9 AC164567.4-201ENSMUST00000219708 483 ntBASIC5.63□□□□□ -1.51
Nkx6-1Q99MA9 AC154426.1-201ENSMUST00000225614 1132 ntBASIC5.63□□□□□ -1.51
Nkx6-1Q99MA9 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Nkx6-1Q99MA9 AC133101.1-201ENSMUST00000226939 1199 ntBASIC5.63□□□□□ -1.51
Nkx6-1Q99MA9 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Nkx6-1Q99MA9 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Nkx6-1Q99MA9 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Nkx6-1Q99MA9 Mir181a-1-201ENSMUST00000083631 87 ntBASIC5.63□□□□□ -1.51
Nkx6-1Q99MA9 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Nkx6-1Q99MA9 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms