Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Gm33594-201ENSMUST00000209502 1333 ntTSL 5 BASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 AC113059.2-201ENSMUST00000213462 3016 ntBASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Gm25507-201ENSMUST00000116981 144 ntBASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Mup-ps10-201ENSMUST00000119626 556 ntBASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Gm14714-201ENSMUST00000119743 439 ntBASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Gm15926-201ENSMUST00000120492 550 ntBASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Vmn1r-ps102-201ENSMUST00000120663 886 ntBASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Gm5401-201ENSMUST00000122444 365 ntBASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Gm13092-201ENSMUST00000136346 260 ntBASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Gm24395-201ENSMUST00000158139 125 ntBASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Gm16139-201ENSMUST00000160015 420 ntBASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Gm3170-201ENSMUST00000168753 850 ntBASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Gm3348-201ENSMUST00000177813 850 ntBASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Gm28301-201ENSMUST00000187582 537 ntTSL 5 BASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Gm28464-201ENSMUST00000187726 622 ntTSL 5 BASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Gm28295-201ENSMUST00000188322 622 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Gm28834-202ENSMUST00000190714 537 ntTSL 5 BASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Gm29132-202ENSMUST00000191588 622 ntTSL 5 BASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Gm30174-201ENSMUST00000191682 537 ntTSL 5 BASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Gm36261-201ENSMUST00000191807 537 ntTSL 5 BASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Gm34550-202ENSMUST00000195186 537 ntTSL 5 BASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Cycs-ps2-201ENSMUST00000197114 292 ntBASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Gm43078-201ENSMUST00000197222 168 ntBASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Gm19065-202ENSMUST00000203910 1165 ntBASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Gm32536-201ENSMUST00000205209 445 ntBASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Cyp2b27-ps-201ENSMUST00000205582 1279 ntBASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Gm18597-201ENSMUST00000209519 694 ntBASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Gm46401-201ENSMUST00000221291 1089 ntTSL 5 BASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Tmem69-201ENSMUST00000069674 974 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Psg20-201ENSMUST00000076677 1428 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 n-R5s215-201ENSMUST00000082480 104 ntBASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Olfr1377-203ENSMUST00000216101 1990 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Pnpla8-201ENSMUST00000043082 13507 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ccdc9Q8VC31 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC5.77□□□□□ -1.49
Ccdc9Q8VC31 AC154677.1-201ENSMUST00000227636 2805 ntBASIC5.77□□□□□ -1.49
Ccdc9Q8VC31 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Ccdc9Q8VC31 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Ccdc9Q8VC31 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ccdc9Q8VC31 Gm11486-201ENSMUST00000107322 478 ntBASIC5.77□□□□□ -1.49
Ccdc9Q8VC31 Mup-ps16-201ENSMUST00000120085 596 ntBASIC5.77□□□□□ -1.49
Ccdc9Q8VC31 Olfr1081-ps1-201ENSMUST00000120210 945 ntBASIC5.77□□□□□ -1.49
Ccdc9Q8VC31 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Ccdc9Q8VC31 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC5.77□□□□□ -1.49
Ccdc9Q8VC31 Gm23662-201ENSMUST00000158046 111 ntBASIC5.77□□□□□ -1.49
Ccdc9Q8VC31 Gm26028-201ENSMUST00000158660 294 ntBASIC5.77□□□□□ -1.49
Ccdc9Q8VC31 Gm6632-201ENSMUST00000168425 954 ntBASIC5.77□□□□□ -1.49
Ccdc9Q8VC31 Olfr102-201ENSMUST00000169373 1027 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Ccdc9Q8VC31 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC5.77□□□□□ -1.49
Ccdc9Q8VC31 Gm8221-201ENSMUST00000178052 564 ntBASIC5.77□□□□□ -1.49
Ccdc9Q8VC31 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC5.77□□□□□ -1.49
Ccdc9Q8VC31 Gm9457-201ENSMUST00000180176 372 ntBASIC5.77□□□□□ -1.49
Ccdc9Q8VC31 Gm27887-201ENSMUST00000184367 102 ntBASIC5.77□□□□□ -1.49
Ccdc9Q8VC31 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC5.77□□□□□ -1.49
Ccdc9Q8VC31 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC5.77□□□□□ -1.49
Ccdc9Q8VC31 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Ccdc9Q8VC31 Gm38131-201ENSMUST00000192449 430 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms