Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm3170-201ENSMUST00000168753 850 ntBASIC5.23□□□□□ -1.57
Clrn1Q8K445 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Clrn1Q8K445 Mir5106-201ENSMUST00000174936 73 ntBASIC5.23□□□□□ -1.57
Clrn1Q8K445 Mir5128-201ENSMUST00000175217 84 ntBASIC5.23□□□□□ -1.57
Clrn1Q8K445 Gm3348-201ENSMUST00000177813 850 ntBASIC5.23□□□□□ -1.57
Clrn1Q8K445 Gm6223-201ENSMUST00000178436 871 ntBASIC5.23□□□□□ -1.57
Clrn1Q8K445 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Clrn1Q8K445 Mir7220-201ENSMUST00000183978 60 ntBASIC5.23□□□□□ -1.57
Clrn1Q8K445 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC5.23□□□□□ -1.57
Clrn1Q8K445 Gm8403-201ENSMUST00000189712 1298 ntBASIC5.23□□□□□ -1.57
Clrn1Q8K445 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC5.23□□□□□ -1.57
Clrn1Q8K445 Gm38185-201ENSMUST00000193195 694 ntBASIC5.23□□□□□ -1.57
Clrn1Q8K445 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC5.23□□□□□ -1.57
Clrn1Q8K445 Gm43007-201ENSMUST00000197618 291 ntBASIC5.23□□□□□ -1.57
Clrn1Q8K445 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Clrn1Q8K445 Cyp2b27-ps-201ENSMUST00000205582 1279 ntBASIC5.23□□□□□ -1.57
Clrn1Q8K445 Gm44580-201ENSMUST00000206333 877 ntBASIC5.23□□□□□ -1.57
Clrn1Q8K445 Gm44910-201ENSMUST00000208451 396 ntBASIC5.23□□□□□ -1.57
Clrn1Q8K445 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC5.23□□□□□ -1.57
Clrn1Q8K445 AC153971.2-201ENSMUST00000214553 777 ntBASIC5.23□□□□□ -1.57
Clrn1Q8K445 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC5.23□□□□□ -1.57
Clrn1Q8K445 Gm7240-201ENSMUST00000220769 664 ntBASIC5.23□□□□□ -1.57
Clrn1Q8K445 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC5.23□□□□□ -1.57
Clrn1Q8K445 AC159619.2-201ENSMUST00000222924 401 ntBASIC5.23□□□□□ -1.57
Clrn1Q8K445 AC109172.2-201ENSMUST00000228792 381 ntBASIC5.23□□□□□ -1.57
Clrn1Q8K445 Gm9762-201ENSMUST00000036976 444 ntBASIC5.23□□□□□ -1.57
Clrn1Q8K445 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Clrn1Q8K445 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Clrn1Q8K445 Mir465c-1-201ENSMUST00000093560 81 ntBASIC5.23□□□□□ -1.57
Clrn1Q8K445 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Clrn1Q8K445 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Clrn1Q8K445 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Clrn1Q8K445 Gm44829-201ENSMUST00000208008 3193 ntBASIC5.23□□□□□ -1.57
Clrn1Q8K445 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Clrn1Q8K445 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
Clrn1Q8K445 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Clrn1Q8K445 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Clrn1Q8K445 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Clrn1Q8K445 Gm43201-201ENSMUST00000195925 3416 ntBASIC5.23□□□□□ -1.57
Clrn1Q8K445 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Clrn1Q8K445 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC5.23□□□□□ -1.57
Clrn1Q8K445 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
Clrn1Q8K445 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
Clrn1Q8K445 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Clrn1Q8K445 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Clrn1Q8K445 Gm43466-201ENSMUST00000197836 5214 ntBASIC5.22□□□□□ -1.57
Clrn1Q8K445 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Clrn1Q8K445 Gm37137-201ENSMUST00000195138 2684 ntBASIC5.22□□□□□ -1.57
Clrn1Q8K445 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Clrn1Q8K445 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Clrn1Q8K445 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Clrn1Q8K445 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Clrn1Q8K445 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Clrn1Q8K445 Gm42727-201ENSMUST00000202446 2823 ntBASIC5.22□□□□□ -1.57
Clrn1Q8K445 AC160028.2-201ENSMUST00000218937 2519 ntBASIC5.22□□□□□ -1.57
Clrn1Q8K445 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Clrn1Q8K445 Gm19125-201ENSMUST00000188408 1383 ntBASIC5.22□□□□□ -1.57
Clrn1Q8K445 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Clrn1Q8K445 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC5.22□□□□□ -1.57
Clrn1Q8K445 Gm24430-201ENSMUST00000104077 104 ntBASIC5.22□□□□□ -1.57
Clrn1Q8K445 Gm11774-201ENSMUST00000118601 293 ntBASIC5.22□□□□□ -1.57
Clrn1Q8K445 Gm11737-201ENSMUST00000118713 468 ntBASIC5.22□□□□□ -1.57
Clrn1Q8K445 Gm13170-201ENSMUST00000119716 643 ntBASIC5.22□□□□□ -1.57
Clrn1Q8K445 Gm12482-201ENSMUST00000120435 630 ntBASIC5.22□□□□□ -1.57
Clrn1Q8K445 Gm14620-201ENSMUST00000120656 383 ntBASIC5.22□□□□□ -1.57
Clrn1Q8K445 Gm13000-201ENSMUST00000120937 496 ntBASIC5.22□□□□□ -1.57
Clrn1Q8K445 Gm9428-201ENSMUST00000127214 769 ntBASIC5.22□□□□□ -1.57
Clrn1Q8K445 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC5.22□□□□□ -1.57
Clrn1Q8K445 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Clrn1Q8K445 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC5.22□□□□□ -1.57
Clrn1Q8K445 Gm25559-201ENSMUST00000157182 74 ntBASIC5.22□□□□□ -1.57
Clrn1Q8K445 Gm25342-201ENSMUST00000157459 122 ntBASIC5.22□□□□□ -1.57
Clrn1Q8K445 Gm24719-201ENSMUST00000157520 110 ntBASIC5.22□□□□□ -1.57
Clrn1Q8K445 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC5.22□□□□□ -1.57
Clrn1Q8K445 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Clrn1Q8K445 Mir3095-201ENSMUST00000175552 87 ntBASIC5.22□□□□□ -1.57
Clrn1Q8K445 Snord116l12-201ENSMUST00000179816 94 ntBASIC5.22□□□□□ -1.57
Clrn1Q8K445 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
Clrn1Q8K445 Mir6238-201ENSMUST00000184140 129 ntBASIC5.22□□□□□ -1.57
Clrn1Q8K445 Gm28596-201ENSMUST00000185870 696 ntBASIC5.22□□□□□ -1.57
Clrn1Q8K445 Gm7266-201ENSMUST00000187999 405 ntBASIC5.22□□□□□ -1.57
Clrn1Q8K445 Gm8241-201ENSMUST00000189286 816 ntBASIC5.22□□□□□ -1.57
Clrn1Q8K445 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC5.22□□□□□ -1.57
Clrn1Q8K445 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC5.22□□□□□ -1.57
Clrn1Q8K445 Gm19694-201ENSMUST00000192364 505 ntBASIC5.22□□□□□ -1.57
Clrn1Q8K445 Gm32295-201ENSMUST00000192558 696 ntBASIC5.22□□□□□ -1.57
Clrn1Q8K445 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Clrn1Q8K445 Gm31260-201ENSMUST00000193478 696 ntBASIC5.22□□□□□ -1.57
Clrn1Q8K445 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC5.22□□□□□ -1.57
Clrn1Q8K445 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Clrn1Q8K445 Gm6520-201ENSMUST00000200636 410 ntBASIC5.22□□□□□ -1.57
Clrn1Q8K445 Klk1b23-ps-201ENSMUST00000206347 345 ntBASIC5.22□□□□□ -1.57
Clrn1Q8K445 Olfr1309-201ENSMUST00000207885 964 ntBASIC5.22□□□□□ -1.57
Clrn1Q8K445 Gm45316-201ENSMUST00000210128 162 ntBASIC5.22□□□□□ -1.57
Clrn1Q8K445 Gm45628-201ENSMUST00000210849 274 ntBASIC5.22□□□□□ -1.57
Clrn1Q8K445 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC5.22□□□□□ -1.57
Clrn1Q8K445 Gm45750-201ENSMUST00000211966 354 ntBASIC5.22□□□□□ -1.57
Clrn1Q8K445 AC102369.1-201ENSMUST00000218415 373 ntBASIC5.22□□□□□ -1.57
Clrn1Q8K445 AC124732.4-201ENSMUST00000220930 1274 ntBASIC5.22□□□□□ -1.57
Clrn1Q8K445 AC121947.1-201ENSMUST00000221755 1145 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms