Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Trim28Q62318 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Trim28Q62318 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC6.33□□□□□ -1.4
Trim28Q62318 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC6.33□□□□□ -1.4
Trim28Q62318 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Trim28Q62318 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC6.33□□□□□ -1.4
Trim28Q62318 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Trim28Q62318 Gm6300-201ENSMUST00000192393 1498 ntBASIC6.33□□□□□ -1.4
Trim28Q62318 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Trim28Q62318 Gm16294-201ENSMUST00000070382 1459 ntTSL 2 BASIC6.33□□□□□ -1.4
Trim28Q62318 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Trim28Q62318 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC6.33□□□□□ -1.4
Trim28Q62318 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Trim28Q62318 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC6.33□□□□□ -1.4
Trim28Q62318 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Trim28Q62318 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
Trim28Q62318 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Trim28Q62318 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Trim28Q62318 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Trim28Q62318 Gm42671-201ENSMUST00000198013 1604 ntBASIC6.32□□□□□ -1.4
Trim28Q62318 AC144772.1-201ENSMUST00000226372 2398 ntBASIC6.32□□□□□ -1.4
Trim28Q62318 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Trim28Q62318 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Trim28Q62318 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Trim28Q62318 Gm19113-201ENSMUST00000217552 1828 ntBASIC6.32□□□□□ -1.4
Trim28Q62318 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Trim28Q62318 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Trim28Q62318 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Trim28Q62318 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Trim28Q62318 Gm26377-201ENSMUST00000102184 108 ntBASIC6.32□□□□□ -1.4
Trim28Q62318 Gm25848-201ENSMUST00000116790 144 ntBASIC6.32□□□□□ -1.4
Trim28Q62318 Gm13733-201ENSMUST00000117290 535 ntBASIC6.32□□□□□ -1.4
Trim28Q62318 Gm12112-201ENSMUST00000117772 231 ntBASIC6.32□□□□□ -1.4
Trim28Q62318 Gm12225-201ENSMUST00000117995 298 ntBASIC6.32□□□□□ -1.4
Trim28Q62318 Gm12577-201ENSMUST00000119701 574 ntBASIC6.32□□□□□ -1.4
Trim28Q62318 Gm15786-201ENSMUST00000121079 450 ntBASIC6.32□□□□□ -1.4
Trim28Q62318 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Trim28Q62318 Gm25278-201ENSMUST00000157267 120 ntBASIC6.32□□□□□ -1.4
Trim28Q62318 Gm25557-201ENSMUST00000158084 315 ntBASIC6.32□□□□□ -1.4
Trim28Q62318 Mir1957b-201ENSMUST00000184608 123 ntBASIC6.32□□□□□ -1.4
Trim28Q62318 Gm28703-201ENSMUST00000185312 1159 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Trim28Q62318 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Trim28Q62318 Gm28153-201ENSMUST00000189853 629 ntTSL 3 BASIC6.32□□□□□ -1.4
Trim28Q62318 Gm28396-201ENSMUST00000190309 379 ntBASIC6.32□□□□□ -1.4
Trim28Q62318 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC6.32□□□□□ -1.4
Trim28Q62318 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC6.32□□□□□ -1.4
Trim28Q62318 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC6.32□□□□□ -1.4
Trim28Q62318 Gm6064-201ENSMUST00000203999 454 ntBASIC6.32□□□□□ -1.4
Trim28Q62318 Gm19201-201ENSMUST00000210127 778 ntBASIC6.32□□□□□ -1.4
Trim28Q62318 Ormdl2-202ENSMUST00000217685 666 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Trim28Q62318 Gm18039-201ENSMUST00000217816 728 ntBASIC6.32□□□□□ -1.4
Trim28Q62318 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Trim28Q62318 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC6.32□□□□□ -1.4
Trim28Q62318 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC6.32□□□□□ -1.4
Trim28Q62318 AC156790.3-201ENSMUST00000226200 254 ntBASIC6.32□□□□□ -1.4
Trim28Q62318 Diaph3-206ENSMUST00000226745 713 ntBASIC6.32□□□□□ -1.4
Trim28Q62318 Pglyrp3-201ENSMUST00000047660 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Trim28Q62318 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Trim28Q62318 Olfr1507-201ENSMUST00000073571 1112 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Trim28Q62318 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Trim28Q62318 Gm43085-201ENSMUST00000202859 3132 ntBASIC6.32□□□□□ -1.4
Trim28Q62318 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Trim28Q62318 Gm42559-201ENSMUST00000201811 3532 ntBASIC6.32□□□□□ -1.4
Trim28Q62318 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Trim28Q62318 Olfr657-202ENSMUST00000213297 1948 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Trim28Q62318 Gm37140-201ENSMUST00000192914 1684 ntBASIC6.32□□□□□ -1.4
Trim28Q62318 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Trim28Q62318 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Trim28Q62318 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Trim28Q62318 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Trim28Q62318 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Trim28Q62318 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Trim28Q62318 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Trim28Q62318 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Trim28Q62318 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Trim28Q62318 Olfr979-202ENSMUST00000215523 3397 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Trim28Q62318 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Trim28Q62318 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Trim28Q62318 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Trim28Q62318 Gm24142-201ENSMUST00000101960 107 ntBASIC6.31□□□□□ -1.4
Trim28Q62318 Gm17132-201ENSMUST00000109542 1158 ntBASIC6.31□□□□□ -1.4
Trim28Q62318 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Trim28Q62318 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Trim28Q62318 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC6.31□□□□□ -1.4
Trim28Q62318 Gm22600-201ENSMUST00000157598 269 ntBASIC6.31□□□□□ -1.4
Trim28Q62318 Zakit-201ENSMUST00000157677 308 ntBASIC6.31□□□□□ -1.4
Trim28Q62318 Gm24962-201ENSMUST00000157917 109 ntBASIC6.31□□□□□ -1.4
Trim28Q62318 Gm16114-201ENSMUST00000161930 300 ntBASIC6.31□□□□□ -1.4
Trim28Q62318 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Trim28Q62318 Vmn1r128-201ENSMUST00000169165 924 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Trim28Q62318 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Trim28Q62318 Ppp1r2-ps9-201ENSMUST00000173100 549 ntBASIC6.31□□□□□ -1.4
Trim28Q62318 Gm20428-201ENSMUST00000174365 283 ntBASIC6.31□□□□□ -1.4
Trim28Q62318 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC6.31□□□□□ -1.4
Trim28Q62318 Gm18588-201ENSMUST00000177308 492 ntBASIC6.31□□□□□ -1.4
Trim28Q62318 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Trim28Q62318 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Trim28Q62318 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Trim28Q62318 Gm18828-202ENSMUST00000181035 310 ntBASIC6.31□□□□□ -1.4
Trim28Q62318 Gm23925-202ENSMUST00000188429 132 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 100.8 ms