Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC10.78□□□□□ -0.68
Trim41Q5NCC3 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trim41Q5NCC3 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
Trim41Q5NCC3 Mir1970-201ENSMUST00000157839 104 ntBASIC10.78□□□□□ -0.68
Trim41Q5NCC3 Gm25224-201ENSMUST00000158195 68 ntBASIC10.78□□□□□ -0.68
Trim41Q5NCC3 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Trim41Q5NCC3 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC10.78□□□□□ -0.68
Trim41Q5NCC3 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trim41Q5NCC3 Gm17847-201ENSMUST00000188261 1127 ntBASIC10.78□□□□□ -0.68
Trim41Q5NCC3 Gm43355-201ENSMUST00000196541 346 ntBASIC10.78□□□□□ -0.68
Trim41Q5NCC3 Gm45789-201ENSMUST00000213038 364 ntBASIC10.78□□□□□ -0.68
Trim41Q5NCC3 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC10.78□□□□□ -0.68
Trim41Q5NCC3 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC10.78□□□□□ -0.68
Trim41Q5NCC3 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trim41Q5NCC3 n-R5s204-201ENSMUST00000082972 119 ntBASIC10.78□□□□□ -0.68
Trim41Q5NCC3 Gm3867-201ENSMUST00000086108 279 ntBASIC10.78□□□□□ -0.68
Trim41Q5NCC3 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
Trim41Q5NCC3 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trim41Q5NCC3 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Trim41Q5NCC3 Gm18632-201ENSMUST00000222597 2087 ntBASIC10.78□□□□□ -0.68
Trim41Q5NCC3 Gm38085-201ENSMUST00000195785 3062 ntBASIC10.78□□□□□ -0.68
Trim41Q5NCC3 Gm44677-201ENSMUST00000209151 3739 ntBASIC10.78□□□□□ -0.68
Trim41Q5NCC3 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC10.77□□□□□ -0.68
Trim41Q5NCC3 Fam90a1b-203ENSMUST00000113903 1760 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trim41Q5NCC3 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Trim41Q5NCC3 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trim41Q5NCC3 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trim41Q5NCC3 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Trim41Q5NCC3 AC154406.1-201ENSMUST00000215220 2529 ntBASIC10.77□□□□□ -0.69
Trim41Q5NCC3 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trim41Q5NCC3 Gm24544-201ENSMUST00000103862 110 ntBASIC10.77□□□□□ -0.69
Trim41Q5NCC3 Gm13475-201ENSMUST00000119290 234 ntBASIC10.77□□□□□ -0.69
Trim41Q5NCC3 Gm6062-201ENSMUST00000120462 631 ntBASIC10.77□□□□□ -0.69
Trim41Q5NCC3 Gm15501-202ENSMUST00000140687 625 ntBASIC10.77□□□□□ -0.69
Trim41Q5NCC3 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC10.77□□□□□ -0.69
Trim41Q5NCC3 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trim41Q5NCC3 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Trim41Q5NCC3 Gm8532-201ENSMUST00000179174 461 ntBASIC10.77□□□□□ -0.69
Trim41Q5NCC3 Gm21856-201ENSMUST00000187547 696 ntBASIC10.77□□□□□ -0.69
Trim41Q5NCC3 Gm38046-201ENSMUST00000192733 550 ntBASIC10.77□□□□□ -0.69
Trim41Q5NCC3 Gm43083-201ENSMUST00000199594 476 ntBASIC10.77□□□□□ -0.69
Trim41Q5NCC3 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trim41Q5NCC3 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC10.77□□□□□ -0.69
Trim41Q5NCC3 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Trim41Q5NCC3 Mir143-201ENSMUST00000083511 63 ntBASIC10.77□□□□□ -0.69
Trim41Q5NCC3 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Trim41Q5NCC3 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trim41Q5NCC3 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Trim41Q5NCC3 AC141476.1-201ENSMUST00000224988 3387 ntBASIC10.77□□□□□ -0.69
Trim41Q5NCC3 Adamts12-201ENSMUST00000061318 8579 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trim41Q5NCC3 Gm45577-201ENSMUST00000210206 2287 ntBASIC10.77□□□□□ -0.69
Trim41Q5NCC3 Gm44164-201ENSMUST00000203605 2561 ntBASIC10.76□□□□□ -0.69
Trim41Q5NCC3 Olfr1386-202ENSMUST00000204518 2553 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
Trim41Q5NCC3 Gm10258-201ENSMUST00000091270 2123 ntBASIC10.76□□□□□ -0.69
Trim41Q5NCC3 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC10.76□□□□□ -0.69
Trim41Q5NCC3 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trim41Q5NCC3 Olfr62-203ENSMUST00000217013 2654 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Trim41Q5NCC3 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trim41Q5NCC3 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trim41Q5NCC3 Cfap61-206ENSMUST00000133433 3998 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Trim41Q5NCC3 Mir449c-201ENSMUST00000102192 109 ntBASIC10.76□□□□□ -0.69
Trim41Q5NCC3 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC10.76□□□□□ -0.69
Trim41Q5NCC3 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC10.76□□□□□ -0.69
Trim41Q5NCC3 Gm6305-201ENSMUST00000121027 1012 ntBASIC10.76□□□□□ -0.69
Trim41Q5NCC3 Gm25827-201ENSMUST00000157089 107 ntBASIC10.76□□□□□ -0.69
Trim41Q5NCC3 Gm23050-201ENSMUST00000158775 165 ntBASIC10.76□□□□□ -0.69
Trim41Q5NCC3 Gm16566-201ENSMUST00000160387 910 ntBASIC10.76□□□□□ -0.69
Trim41Q5NCC3 Gm26057-201ENSMUST00000178099 165 ntBASIC10.76□□□□□ -0.69
Trim41Q5NCC3 Gm29229-201ENSMUST00000188874 323 ntBASIC10.76□□□□□ -0.69
Trim41Q5NCC3 Ighv12-2-201ENSMUST00000191949 362 ntBASIC10.76□□□□□ -0.69
Trim41Q5NCC3 Gm43561-201ENSMUST00000199866 448 ntBASIC10.76□□□□□ -0.69
Trim41Q5NCC3 Gm45150-201ENSMUST00000206051 467 ntBASIC10.76□□□□□ -0.69
Trim41Q5NCC3 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC10.76□□□□□ -0.69
Trim41Q5NCC3 AC138290.2-201ENSMUST00000218822 369 ntBASIC10.76□□□□□ -0.69
Trim41Q5NCC3 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC10.76□□□□□ -0.69
Trim41Q5NCC3 AC124732.4-201ENSMUST00000220930 1274 ntBASIC10.76□□□□□ -0.69
Trim41Q5NCC3 Gm2614-201ENSMUST00000223227 403 ntBASIC10.76□□□□□ -0.69
Trim41Q5NCC3 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Trim41Q5NCC3 Olfr881-201ENSMUST00000074611 948 ntBASIC10.76□□□□□ -0.69
Trim41Q5NCC3 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC10.76□□□□□ -0.69
Trim41Q5NCC3 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Trim41Q5NCC3 Cfap74-203ENSMUST00000105619 2364 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
Trim41Q5NCC3 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trim41Q5NCC3 AC174459.1-201ENSMUST00000224476 1943 ntBASIC10.76□□□□□ -0.69
Trim41Q5NCC3 AC158779.2-201ENSMUST00000227902 1947 ntBASIC10.76□□□□□ -0.69
Trim41Q5NCC3 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Trim41Q5NCC3 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trim41Q5NCC3 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
Trim41Q5NCC3 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trim41Q5NCC3 Ap5m1-208ENSMUST00000228238 3514 ntBASIC10.75□□□□□ -0.69
Trim41Q5NCC3 Gm43190-201ENSMUST00000187850 1779 ntBASIC10.75□□□□□ -0.69
Trim41Q5NCC3 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC10.75□□□□□ -0.69
Trim41Q5NCC3 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Trim41Q5NCC3 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trim41Q5NCC3 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trim41Q5NCC3 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Trim41Q5NCC3 Gm11972-201ENSMUST00000118514 389 ntBASIC10.75□□□□□ -0.69
Trim41Q5NCC3 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trim41Q5NCC3 Gm23669-201ENSMUST00000157470 128 ntBASIC10.75□□□□□ -0.69
Trim41Q5NCC3 Gm24419-201ENSMUST00000157875 332 ntBASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 120.8 ms