Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Upf3bQ3ULL6 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Upf3bQ3ULL6 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Upf3bQ3ULL6 Gm24664-201ENSMUST00000158939 100 ntBASIC4.75□□□□□ -1.65
Upf3bQ3ULL6 Gm16134-201ENSMUST00000161714 336 ntBASIC4.75□□□□□ -1.65
Upf3bQ3ULL6 Gm18128-201ENSMUST00000172625 511 ntBASIC4.75□□□□□ -1.65
Upf3bQ3ULL6 Gm25534-201ENSMUST00000175365 125 ntBASIC4.75□□□□□ -1.65
Upf3bQ3ULL6 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Upf3bQ3ULL6 Gm8282-201ENSMUST00000187559 483 ntBASIC4.75□□□□□ -1.65
Upf3bQ3ULL6 Gm29148-201ENSMUST00000188140 336 ntBASIC4.75□□□□□ -1.65
Upf3bQ3ULL6 Gm37167-201ENSMUST00000194946 396 ntBASIC4.75□□□□□ -1.65
Upf3bQ3ULL6 1110060G06Rik-201ENSMUST00000200372 499 ntBASIC4.75□□□□□ -1.65
Upf3bQ3ULL6 AC121804.1-201ENSMUST00000221016 394 ntBASIC4.75□□□□□ -1.65
Upf3bQ3ULL6 CT025616.1-201ENSMUST00000221158 412 ntBASIC4.75□□□□□ -1.65
Upf3bQ3ULL6 Uts2b-201ENSMUST00000070531 835 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Upf3bQ3ULL6 Olfr1505-201ENSMUST00000081520 1103 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Upf3bQ3ULL6 Olfr18-201ENSMUST00000086473 1156 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Upf3bQ3ULL6 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Upf3bQ3ULL6 Olfr1133-201ENSMUST00000099855 942 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Upf3bQ3ULL6 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Upf3bQ3ULL6 Gm26996-201ENSMUST00000204418 1359 ntBASIC4.75□□□□□ -1.65
Upf3bQ3ULL6 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Upf3bQ3ULL6 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Upf3bQ3ULL6 Gm43844-201ENSMUST00000202926 5605 ntBASIC4.75□□□□□ -1.65
Upf3bQ3ULL6 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Upf3bQ3ULL6 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Upf3bQ3ULL6 Gm21778-202ENSMUST00000185926 1482 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Upf3bQ3ULL6 Gm43010-201ENSMUST00000195993 2878 ntBASIC4.75□□□□□ -1.65
Upf3bQ3ULL6 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Upf3bQ3ULL6 Gm17752-201ENSMUST00000185787 3726 ntBASIC4.74□□□□□ -1.65
Upf3bQ3ULL6 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC4.74□□□□□ -1.65
Upf3bQ3ULL6 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Upf3bQ3ULL6 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Upf3bQ3ULL6 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
Upf3bQ3ULL6 Gm43528-201ENSMUST00000199492 1674 ntBASIC4.74□□□□□ -1.65
Upf3bQ3ULL6 Gm43319-201ENSMUST00000198036 2270 ntBASIC4.74□□□□□ -1.65
Upf3bQ3ULL6 Gm8995-201ENSMUST00000184842 7280 ntBASIC4.74□□□□□ -1.65
Upf3bQ3ULL6 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Upf3bQ3ULL6 Gm3055-201ENSMUST00000105316 720 ntTSL 5 BASIC4.74□□□□□ -1.65
Upf3bQ3ULL6 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC4.74□□□□□ -1.65
Upf3bQ3ULL6 Gm14933-201ENSMUST00000118840 481 ntBASIC4.74□□□□□ -1.65
Upf3bQ3ULL6 Gm12719-201ENSMUST00000118859 241 ntBASIC4.74□□□□□ -1.65
Upf3bQ3ULL6 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC4.74□□□□□ -1.65
Upf3bQ3ULL6 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC4.74□□□□□ -1.65
Upf3bQ3ULL6 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC4.74□□□□□ -1.65
Upf3bQ3ULL6 Gm23906-201ENSMUST00000157573 128 ntBASIC4.74□□□□□ -1.65
Upf3bQ3ULL6 Gm15796-201ENSMUST00000162135 204 ntBASIC4.74□□□□□ -1.65
Upf3bQ3ULL6 Gm20389-201ENSMUST00000174217 1006 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Upf3bQ3ULL6 Gm23799-201ENSMUST00000175559 120 ntBASIC4.74□□□□□ -1.65
Upf3bQ3ULL6 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Upf3bQ3ULL6 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC4.74□□□□□ -1.65
Upf3bQ3ULL6 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Upf3bQ3ULL6 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Upf3bQ3ULL6 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Upf3bQ3ULL6 Gm27940-201ENSMUST00000184449 98 ntBASIC4.74□□□□□ -1.65
Upf3bQ3ULL6 Gm5058-201ENSMUST00000187331 463 ntBASIC4.74□□□□□ -1.65
Upf3bQ3ULL6 Gm8480-201ENSMUST00000190350 698 ntBASIC4.74□□□□□ -1.65
Upf3bQ3ULL6 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC4.74□□□□□ -1.65
Upf3bQ3ULL6 Gm4714-201ENSMUST00000203395 279 ntBASIC4.74□□□□□ -1.65
Upf3bQ3ULL6 Gm44389-201ENSMUST00000203795 182 ntBASIC4.74□□□□□ -1.65
Upf3bQ3ULL6 Olfr663-201ENSMUST00000209914 959 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Upf3bQ3ULL6 AC122397.2-201ENSMUST00000227422 686 ntBASIC4.74□□□□□ -1.65
Upf3bQ3ULL6 AC164437.2-201ENSMUST00000228915 797 ntBASIC4.74□□□□□ -1.65
Upf3bQ3ULL6 Mecom-201ENSMUST00000061088 348 ntBASIC4.74□□□□□ -1.65
Upf3bQ3ULL6 Zfp781-201ENSMUST00000076281 732 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Upf3bQ3ULL6 Olfr1162-201ENSMUST00000099837 945 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Upf3bQ3ULL6 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Upf3bQ3ULL6 Gm43313-201ENSMUST00000201398 2235 ntBASIC4.74□□□□□ -1.65
Upf3bQ3ULL6 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Upf3bQ3ULL6 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Upf3bQ3ULL6 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Upf3bQ3ULL6 Gm44542-201ENSMUST00000208677 4314 ntBASIC4.74□□□□□ -1.65
Upf3bQ3ULL6 Gm45697-201ENSMUST00000212893 2876 ntBASIC4.74□□□□□ -1.65
Upf3bQ3ULL6 Fus-202ENSMUST00000079045 2623 ntBASIC4.74□□□□□ -1.65
Upf3bQ3ULL6 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Upf3bQ3ULL6 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Upf3bQ3ULL6 Olfr1257-202ENSMUST00000111519 2756 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
Upf3bQ3ULL6 Gm38057-201ENSMUST00000195551 3203 ntBASIC4.73□□□□□ -1.65
Upf3bQ3ULL6 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Upf3bQ3ULL6 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Upf3bQ3ULL6 Gm16892-201ENSMUST00000180999 1726 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Upf3bQ3ULL6 Gm6062-201ENSMUST00000120462 631 ntBASIC4.73□□□□□ -1.65
Upf3bQ3ULL6 Gm12222-201ENSMUST00000121368 260 ntBASIC4.73□□□□□ -1.65
Upf3bQ3ULL6 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Upf3bQ3ULL6 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC4.73□□□□□ -1.65
Upf3bQ3ULL6 Gm26373-201ENSMUST00000157833 103 ntBASIC4.73□□□□□ -1.65
Upf3bQ3ULL6 Gm22536-201ENSMUST00000158171 134 ntBASIC4.73□□□□□ -1.65
Upf3bQ3ULL6 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Upf3bQ3ULL6 Gm23638-201ENSMUST00000175073 126 ntBASIC4.73□□□□□ -1.65
Upf3bQ3ULL6 Gm23158-201ENSMUST00000175076 126 ntBASIC4.73□□□□□ -1.65
Upf3bQ3ULL6 Gm22907-201ENSMUST00000175198 126 ntBASIC4.73□□□□□ -1.65
Upf3bQ3ULL6 Gm22625-201ENSMUST00000175382 126 ntBASIC4.73□□□□□ -1.65
Upf3bQ3ULL6 Gm22875-201ENSMUST00000175449 126 ntBASIC4.73□□□□□ -1.65
Upf3bQ3ULL6 Gm25197-201ENSMUST00000175516 126 ntBASIC4.73□□□□□ -1.65
Upf3bQ3ULL6 Vmn2r-ps134-201ENSMUST00000176907 1046 ntBASIC4.73□□□□□ -1.65
Upf3bQ3ULL6 Gm27857-201ENSMUST00000176930 126 ntBASIC4.73□□□□□ -1.65
Upf3bQ3ULL6 Gm26268-201ENSMUST00000177685 126 ntBASIC4.73□□□□□ -1.65
Upf3bQ3ULL6 Gm23681-201ENSMUST00000178821 126 ntBASIC4.73□□□□□ -1.65
Upf3bQ3ULL6 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Upf3bQ3ULL6 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 102.9 ms