Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC5.77□□□□□ -1.49
Sox9Q04887 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC5.77□□□□□ -1.49
Sox9Q04887 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC5.77□□□□□ -1.49
Sox9Q04887 Crem-224ENSMUST00000147138 436 ntTSL 5 BASIC5.77□□□□□ -1.49
Sox9Q04887 Prlr-212ENSMUST00000148257 1190 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Sox9Q04887 Gm25962-201ENSMUST00000157173 168 ntBASIC5.77□□□□□ -1.49
Sox9Q04887 Gm25278-201ENSMUST00000157267 120 ntBASIC5.77□□□□□ -1.49
Sox9Q04887 Gm26486-201ENSMUST00000158021 110 ntBASIC5.77□□□□□ -1.49
Sox9Q04887 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
Sox9Q04887 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Sox9Q04887 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Sox9Q04887 Gm27754-201ENSMUST00000183340 126 ntBASIC5.77□□□□□ -1.49
Sox9Q04887 Mir6933-201ENSMUST00000184982 81 ntBASIC5.77□□□□□ -1.49
Sox9Q04887 Gm7967-203ENSMUST00000191409 1049 ntTSL 5 BASIC5.77□□□□□ -1.49
Sox9Q04887 Gm3933-201ENSMUST00000195391 439 ntBASIC5.77□□□□□ -1.49
Sox9Q04887 Gm43096-201ENSMUST00000196173 421 ntBASIC5.77□□□□□ -1.49
Sox9Q04887 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC5.77□□□□□ -1.49
Sox9Q04887 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Sox9Q04887 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Sox9Q04887 Gm43232-201ENSMUST00000201346 364 ntBASIC5.77□□□□□ -1.49
Sox9Q04887 Gm18691-201ENSMUST00000203593 872 ntBASIC5.77□□□□□ -1.49
Sox9Q04887 Gm44277-201ENSMUST00000205128 649 ntBASIC5.77□□□□□ -1.49
Sox9Q04887 Gm45700-201ENSMUST00000205866 347 ntBASIC5.77□□□□□ -1.49
Sox9Q04887 Gm19880-201ENSMUST00000207731 318 ntBASIC5.77□□□□□ -1.49
Sox9Q04887 Gm6009-201ENSMUST00000210848 280 ntBASIC5.77□□□□□ -1.49
Sox9Q04887 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC5.77□□□□□ -1.49
Sox9Q04887 AC157017.2-201ENSMUST00000218354 777 ntBASIC5.77□□□□□ -1.49
Sox9Q04887 AC127279.1-201ENSMUST00000220140 637 ntBASIC5.77□□□□□ -1.49
Sox9Q04887 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC5.77□□□□□ -1.49
Sox9Q04887 AC113269.1-201ENSMUST00000227185 674 ntBASIC5.77□□□□□ -1.49
Sox9Q04887 AC144628.1-201ENSMUST00000227943 466 ntBASIC5.77□□□□□ -1.49
Sox9Q04887 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Sox9Q04887 n-R5s13-201ENSMUST00000093707 119 ntBASIC5.77□□□□□ -1.49
Sox9Q04887 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Sox9Q04887 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Sox9Q04887 Gm45819-201ENSMUST00000210940 1751 ntBASIC5.77□□□□□ -1.49
Sox9Q04887 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Sox9Q04887 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
Sox9Q04887 Fam26d-202ENSMUST00000218239 3075 ntBASIC5.77□□□□□ -1.49
Sox9Q04887 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Sox9Q04887 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC5.77□□□□□ -1.49
Sox9Q04887 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Sox9Q04887 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Sox9Q04887 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Sox9Q04887 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC5.76□□□□□ -1.49
Sox9Q04887 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Sox9Q04887 LOC102637012-201ENSMUST00000217248 2562 ntBASIC5.76□□□□□ -1.49
Sox9Q04887 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Sox9Q04887 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Sox9Q04887 AC127371.2-201ENSMUST00000228108 1933 ntBASIC5.76□□□□□ -1.49
Sox9Q04887 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC5.76□□□□□ -1.49
Sox9Q04887 Cnga1-205ENSMUST00000201463 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Sox9Q04887 AC130827.1-201ENSMUST00000220476 3850 ntBASIC5.76□□□□□ -1.49
Sox9Q04887 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Sox9Q04887 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Sox9Q04887 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Sox9Q04887 Gm16082-201ENSMUST00000115992 377 ntBASIC5.76□□□□□ -1.49
Sox9Q04887 Gm14172-201ENSMUST00000118255 644 ntBASIC5.76□□□□□ -1.49
Sox9Q04887 Gm14082-201ENSMUST00000118582 801 ntBASIC5.76□□□□□ -1.49
Sox9Q04887 Gm11913-201ENSMUST00000119094 336 ntBASIC5.76□□□□□ -1.49
Sox9Q04887 Gm6884-201ENSMUST00000119318 615 ntBASIC5.76□□□□□ -1.49
Sox9Q04887 Gm12770-201ENSMUST00000121734 462 ntBASIC5.76□□□□□ -1.49
Sox9Q04887 Gm12094-201ENSMUST00000121781 472 ntBASIC5.76□□□□□ -1.49
Sox9Q04887 Gm16411-201ENSMUST00000122164 1100 ntBASIC5.76□□□□□ -1.49
Sox9Q04887 Gm23792-201ENSMUST00000122557 93 ntBASIC5.76□□□□□ -1.49
Sox9Q04887 Magea9-ps-201ENSMUST00000140655 732 ntBASIC5.76□□□□□ -1.49
Sox9Q04887 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC5.76□□□□□ -1.49
Sox9Q04887 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Sox9Q04887 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Sox9Q04887 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Sox9Q04887 Gm24905-201ENSMUST00000158129 104 ntBASIC5.76□□□□□ -1.49
Sox9Q04887 Gm23025-201ENSMUST00000158769 111 ntBASIC5.76□□□□□ -1.49
Sox9Q04887 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC5.76□□□□□ -1.49
Sox9Q04887 Magea9-ps-202ENSMUST00000167328 899 ntBASIC5.76□□□□□ -1.49
Sox9Q04887 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Sox9Q04887 Gm22852-201ENSMUST00000177899 101 ntBASIC5.76□□□□□ -1.49
Sox9Q04887 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Sox9Q04887 Gm29600-201ENSMUST00000188687 377 ntBASIC5.76□□□□□ -1.49
Sox9Q04887 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC5.76□□□□□ -1.49
Sox9Q04887 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC5.76□□□□□ -1.49
Sox9Q04887 Gm43171-201ENSMUST00000199882 291 ntBASIC5.76□□□□□ -1.49
Sox9Q04887 Gm29920-201ENSMUST00000206876 754 ntBASIC5.76□□□□□ -1.49
Sox9Q04887 Gm17994-201ENSMUST00000209260 533 ntBASIC5.76□□□□□ -1.49
Sox9Q04887 Gm21041-201ENSMUST00000214829 823 ntBASIC5.76□□□□□ -1.49
Sox9Q04887 4930591E09Rik-201ENSMUST00000215643 480 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Sox9Q04887 Gm18228-201ENSMUST00000217297 1091 ntBASIC5.76□□□□□ -1.49
Sox9Q04887 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Sox9Q04887 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC5.76□□□□□ -1.49
Sox9Q04887 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC5.76□□□□□ -1.49
Sox9Q04887 AC165146.1-201ENSMUST00000223777 900 ntBASIC5.76□□□□□ -1.49
Sox9Q04887 AC154354.1-201ENSMUST00000224585 2109 ntBASIC5.76□□□□□ -1.49
Sox9Q04887 AC155314.1-201ENSMUST00000227624 508 ntBASIC5.76□□□□□ -1.49
Sox9Q04887 Ocm-201ENSMUST00000031622 658 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Sox9Q04887 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Sox9Q04887 Olfr1020-201ENSMUST00000055840 1079 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Sox9Q04887 Mir325-201ENSMUST00000083491 98 ntBASIC5.76□□□□□ -1.49
Sox9Q04887 Gm22826-201ENSMUST00000083774 165 ntBASIC5.76□□□□□ -1.49
Sox9Q04887 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Sox9Q04887 Gm44235-201ENSMUST00000204312 3058 ntBASIC5.76□□□□□ -1.49
Sox9Q04887 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms