Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Gabpb1Q00420 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Gabpb1Q00420 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Gabpb1Q00420 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Gabpb1Q00420 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Gabpb1Q00420 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Gabpb1Q00420 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Gabpb1Q00420 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Gabpb1Q00420 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Gabpb1Q00420 Gm29000-207ENSMUST00000190152 1160 ntTSL 5 BASIC4.73□□□□□ -1.65
Gabpb1Q00420 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Gabpb1Q00420 Gm20819-201ENSMUST00000191091 925 ntBASIC4.73□□□□□ -1.65
Gabpb1Q00420 Gm20871-201ENSMUST00000191322 931 ntBASIC4.73□□□□□ -1.65
Gabpb1Q00420 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Gabpb1Q00420 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Gabpb1Q00420 Gm36998-201ENSMUST00000193205 704 ntBASIC4.73□□□□□ -1.65
Gabpb1Q00420 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Gabpb1Q00420 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC4.73□□□□□ -1.65
Gabpb1Q00420 Gm29793-201ENSMUST00000202874 460 ntBASIC4.73□□□□□ -1.65
Gabpb1Q00420 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC4.73□□□□□ -1.65
Gabpb1Q00420 Gm7333-201ENSMUST00000213449 1060 ntBASIC4.73□□□□□ -1.65
Gabpb1Q00420 AC158803.3-201ENSMUST00000220024 211 ntBASIC4.73□□□□□ -1.65
Gabpb1Q00420 AC127279.1-201ENSMUST00000220140 637 ntBASIC4.73□□□□□ -1.65
Gabpb1Q00420 CU024892.1-201ENSMUST00000224869 515 ntBASIC4.73□□□□□ -1.65
Gabpb1Q00420 AC112142.1-206ENSMUST00000228136 982 ntBASIC4.73□□□□□ -1.65
Gabpb1Q00420 Enkur-201ENSMUST00000027992 1199 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Gabpb1Q00420 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Gabpb1Q00420 Mir134-201ENSMUST00000083492 71 ntBASIC4.73□□□□□ -1.65
Gabpb1Q00420 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Gabpb1Q00420 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Gabpb1Q00420 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Gabpb1Q00420 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Gabpb1Q00420 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Gabpb1Q00420 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Gabpb1Q00420 Gm44668-201ENSMUST00000207911 3265 ntBASIC4.72□□□□□ -1.65
Gabpb1Q00420 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Gabpb1Q00420 Gm12062-201ENSMUST00000117533 259 ntBASIC4.72□□□□□ -1.65
Gabpb1Q00420 Gm12988-201ENSMUST00000119054 478 ntBASIC4.72□□□□□ -1.65
Gabpb1Q00420 Gm14516-201ENSMUST00000120012 252 ntBASIC4.72□□□□□ -1.65
Gabpb1Q00420 Gm14776-201ENSMUST00000121029 887 ntBASIC4.72□□□□□ -1.65
Gabpb1Q00420 Gm24628-201ENSMUST00000122761 289 ntBASIC4.72□□□□□ -1.65
Gabpb1Q00420 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC4.72□□□□□ -1.65
Gabpb1Q00420 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Gabpb1Q00420 Gm22519-201ENSMUST00000158270 178 ntBASIC4.72□□□□□ -1.65
Gabpb1Q00420 Gm16566-201ENSMUST00000160387 910 ntBASIC4.72□□□□□ -1.65
Gabpb1Q00420 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC4.72□□□□□ -1.65
Gabpb1Q00420 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
Gabpb1Q00420 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
Gabpb1Q00420 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
Gabpb1Q00420 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
Gabpb1Q00420 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
Gabpb1Q00420 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
Gabpb1Q00420 Gm28703-201ENSMUST00000185312 1159 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Gabpb1Q00420 Trbv28-201ENSMUST00000192804 264 ntBASIC4.72□□□□□ -1.65
Gabpb1Q00420 Gm38150-201ENSMUST00000192996 452 ntBASIC4.72□□□□□ -1.65
Gabpb1Q00420 Gm37881-201ENSMUST00000193001 421 ntBASIC4.72□□□□□ -1.65
Gabpb1Q00420 Gm36986-201ENSMUST00000195320 353 ntBASIC4.72□□□□□ -1.65
Gabpb1Q00420 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC4.72□□□□□ -1.65
Gabpb1Q00420 Mir142-201ENSMUST00000198092 64 ntBASIC4.72□□□□□ -1.65
Gabpb1Q00420 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC4.72□□□□□ -1.65
Gabpb1Q00420 AC164567.4-201ENSMUST00000219708 483 ntBASIC4.72□□□□□ -1.65
Gabpb1Q00420 AC174776.1-201ENSMUST00000221509 405 ntBASIC4.72□□□□□ -1.65
Gabpb1Q00420 AC174776.2-201ENSMUST00000222561 405 ntBASIC4.72□□□□□ -1.65
Gabpb1Q00420 AC098742.1-201ENSMUST00000227945 373 ntBASIC4.72□□□□□ -1.65
Gabpb1Q00420 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Gabpb1Q00420 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
Gabpb1Q00420 Gm42704-201ENSMUST00000196875 1778 ntBASIC4.72□□□□□ -1.65
Gabpb1Q00420 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC4.72□□□□□ -1.65
Gabpb1Q00420 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Gabpb1Q00420 Gm15624-203ENSMUST00000204811 3402 ntBASIC4.72□□□□□ -1.65
Gabpb1Q00420 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Gabpb1Q00420 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
Gabpb1Q00420 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Gabpb1Q00420 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC4.71□□□□□ -1.66
Gabpb1Q00420 Gm38101-201ENSMUST00000193484 3557 ntBASIC4.71□□□□□ -1.66
Gabpb1Q00420 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
Gabpb1Q00420 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Gabpb1Q00420 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Gabpb1Q00420 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC4.71□□□□□ -1.66
Gabpb1Q00420 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC4.71□□□□□ -1.66
Gabpb1Q00420 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC4.71□□□□□ -1.66
Gabpb1Q00420 Snora81-201ENSMUST00000157310 178 ntBASIC4.71□□□□□ -1.66
Gabpb1Q00420 Gm26310-201ENSMUST00000157766 117 ntBASIC4.71□□□□□ -1.66
Gabpb1Q00420 Gm16134-201ENSMUST00000161714 336 ntBASIC4.71□□□□□ -1.66
Gabpb1Q00420 Gm17043-201ENSMUST00000164621 1283 ntBASIC4.71□□□□□ -1.66
Gabpb1Q00420 Vmn1r170-201ENSMUST00000170166 915 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Gabpb1Q00420 Vmn2r-ps68-201ENSMUST00000173880 861 ntBASIC4.71□□□□□ -1.66
Gabpb1Q00420 Gm9443-201ENSMUST00000188406 816 ntBASIC4.71□□□□□ -1.66
Gabpb1Q00420 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC4.71□□□□□ -1.66
Gabpb1Q00420 Trav3-2-201ENSMUST00000198999 305 ntBASIC4.71□□□□□ -1.66
Gabpb1Q00420 Gm35667-201ENSMUST00000199122 711 ntTSL 5 BASIC4.71□□□□□ -1.66
Gabpb1Q00420 AC131720.1-201ENSMUST00000218629 2132 ntBASIC4.71□□□□□ -1.66
Gabpb1Q00420 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC4.71□□□□□ -1.66
Gabpb1Q00420 AC211878.2-201ENSMUST00000222486 488 ntBASIC4.71□□□□□ -1.66
Gabpb1Q00420 Olfr482-201ENSMUST00000081184 972 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Gabpb1Q00420 Gm22220-201ENSMUST00000082671 149 ntBASIC4.71□□□□□ -1.66
Gabpb1Q00420 Snora52-201ENSMUST00000082732 137 ntBASIC4.71□□□□□ -1.66
Gabpb1Q00420 Gm22155-201ENSMUST00000083836 162 ntBASIC4.71□□□□□ -1.66
Gabpb1Q00420 Olfr1216-201ENSMUST00000099800 936 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Gabpb1Q00420 Gm43668-201ENSMUST00000197014 5342 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms