Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC5.19□□□□□ -1.58
CiitaP79621 Olfr690-201ENSMUST00000061920 1062 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CiitaP79621 Olfr68-201ENSMUST00000072513 948 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CiitaP79621 Gm23300-201ENSMUST00000082712 125 ntBASIC5.19□□□□□ -1.58
CiitaP79621 Olfr725-201ENSMUST00000089844 1110 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CiitaP79621 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CiitaP79621 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CiitaP79621 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CiitaP79621 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CiitaP79621 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC5.19□□□□□ -1.58
CiitaP79621 Gm28074-201ENSMUST00000190424 1497 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CiitaP79621 Gm16294-201ENSMUST00000070382 1459 ntTSL 2 BASIC5.19□□□□□ -1.58
CiitaP79621 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CiitaP79621 AC160931.3-201ENSMUST00000222111 2267 ntBASIC5.18□□□□□ -1.58
CiitaP79621 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CiitaP79621 Gm43428-201ENSMUST00000200108 3845 ntBASIC5.18□□□□□ -1.58
CiitaP79621 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CiitaP79621 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CiitaP79621 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CiitaP79621 Gm12112-201ENSMUST00000117772 231 ntBASIC5.18□□□□□ -1.58
CiitaP79621 Gm12230-201ENSMUST00000118301 454 ntBASIC5.18□□□□□ -1.58
CiitaP79621 Gm12231-201ENSMUST00000119447 695 ntBASIC5.18□□□□□ -1.58
CiitaP79621 Gm13815-201ENSMUST00000119963 412 ntBASIC5.18□□□□□ -1.58
CiitaP79621 Gm11584-201ENSMUST00000120636 325 ntBASIC5.18□□□□□ -1.58
CiitaP79621 Gm15141-201ENSMUST00000121860 729 ntBASIC5.18□□□□□ -1.58
CiitaP79621 Gm14288-202ENSMUST00000123863 267 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
CiitaP79621 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CiitaP79621 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CiitaP79621 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CiitaP79621 Gm24002-201ENSMUST00000158456 104 ntBASIC5.18□□□□□ -1.58
CiitaP79621 Gm16571-201ENSMUST00000159112 291 ntBASIC5.18□□□□□ -1.58
CiitaP79621 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CiitaP79621 Gm22646-201ENSMUST00000175130 115 ntBASIC5.18□□□□□ -1.58
CiitaP79621 Gm25534-201ENSMUST00000175365 125 ntBASIC5.18□□□□□ -1.58
CiitaP79621 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
CiitaP79621 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC5.18□□□□□ -1.58
CiitaP79621 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CiitaP79621 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CiitaP79621 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CiitaP79621 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC5.18□□□□□ -1.58
CiitaP79621 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CiitaP79621 Mir6410-201ENSMUST00000184204 104 ntBASIC5.18□□□□□ -1.58
CiitaP79621 Mir1957b-201ENSMUST00000184608 123 ntBASIC5.18□□□□□ -1.58
CiitaP79621 Gm28703-201ENSMUST00000185312 1159 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CiitaP79621 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CiitaP79621 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC5.18□□□□□ -1.58
CiitaP79621 Gm28974-201ENSMUST00000187893 231 ntBASIC5.18□□□□□ -1.58
CiitaP79621 4930548G14Rik-202ENSMUST00000190364 1185 ntTSL 2 BASIC5.18□□□□□ -1.58
CiitaP79621 Gm42720-201ENSMUST00000196813 300 ntBASIC5.18□□□□□ -1.58
CiitaP79621 AC174780.1-201ENSMUST00000199415 1107 ntBASIC5.18□□□□□ -1.58
CiitaP79621 Gm44817-201ENSMUST00000205416 453 ntBASIC5.18□□□□□ -1.58
CiitaP79621 Gm18487-201ENSMUST00000215826 878 ntBASIC5.18□□□□□ -1.58
CiitaP79621 AC159263.3-201ENSMUST00000223434 460 ntBASIC5.18□□□□□ -1.58
CiitaP79621 CT956049.1-201ENSMUST00000225671 763 ntBASIC5.18□□□□□ -1.58
CiitaP79621 AC154627.3-201ENSMUST00000228441 334 ntBASIC5.18□□□□□ -1.58
CiitaP79621 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CiitaP79621 Ear6-201ENSMUST00000074477 713 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CiitaP79621 Gm25140-201ENSMUST00000083254 140 ntBASIC5.18□□□□□ -1.58
CiitaP79621 Spink13-201ENSMUST00000097557 796 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CiitaP79621 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CiitaP79621 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC5.18□□□□□ -1.58
CiitaP79621 Gm10780-201ENSMUST00000099459 285 ntBASIC5.18□□□□□ -1.58
CiitaP79621 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
CiitaP79621 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC5.18□□□□□ -1.58
CiitaP79621 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CiitaP79621 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CiitaP79621 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
CiitaP79621 Gm44822-201ENSMUST00000208559 6389 ntBASIC5.17□□□□□ -1.58
CiitaP79621 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CiitaP79621 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CiitaP79621 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CiitaP79621 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CiitaP79621 Gm28969-205ENSMUST00000186757 1581 ntTSL 5 BASIC5.17□□□□□ -1.58
CiitaP79621 Gm28990-204ENSMUST00000189255 1581 ntTSL 5 BASIC5.17□□□□□ -1.58
CiitaP79621 Gm28677-209ENSMUST00000190010 1581 ntTSL 5 BASIC5.17□□□□□ -1.58
CiitaP79621 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CiitaP79621 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
CiitaP79621 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC5.17□□□□□ -1.58
CiitaP79621 Gm15161-201ENSMUST00000117340 387 ntBASIC5.17□□□□□ -1.58
CiitaP79621 Gm12392-201ENSMUST00000118014 938 ntBASIC5.17□□□□□ -1.58
CiitaP79621 Gm12186-201ENSMUST00000119050 945 ntBASIC5.17□□□□□ -1.58
CiitaP79621 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC5.17□□□□□ -1.58
CiitaP79621 Gm14623-201ENSMUST00000121398 603 ntBASIC5.17□□□□□ -1.58
CiitaP79621 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CiitaP79621 Gm15178-201ENSMUST00000132100 472 ntTSL 5 BASIC5.17□□□□□ -1.58
CiitaP79621 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC5.17□□□□□ -1.58
CiitaP79621 Gm23902-201ENSMUST00000157571 134 ntBASIC5.17□□□□□ -1.58
CiitaP79621 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CiitaP79621 Gm16451-201ENSMUST00000173484 924 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CiitaP79621 Gm20428-201ENSMUST00000174365 283 ntBASIC5.17□□□□□ -1.58
CiitaP79621 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC5.17□□□□□ -1.58
CiitaP79621 Mir7022-201ENSMUST00000183749 61 ntBASIC5.17□□□□□ -1.58
CiitaP79621 Gm38046-201ENSMUST00000192733 550 ntBASIC5.17□□□□□ -1.58
CiitaP79621 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC5.17□□□□□ -1.58
CiitaP79621 Gm6261-201ENSMUST00000204707 760 ntBASIC5.17□□□□□ -1.58
CiitaP79621 Olfr864-ps1-201ENSMUST00000212664 930 ntBASIC5.17□□□□□ -1.58
CiitaP79621 AC159293.2-201ENSMUST00000222289 424 ntBASIC5.17□□□□□ -1.58
CiitaP79621 AC154270.1-201ENSMUST00000227226 426 ntBASIC5.17□□□□□ -1.58
CiitaP79621 Fabp2-201ENSMUST00000023820 965 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CiitaP79621 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms