Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sox1P53783 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Sox1P53783 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sox1P53783 Gm26606-201ENSMUST00000181292 2439 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Sox1P53783 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sox1P53783 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sox1P53783 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Sox1P53783 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sox1P53783 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Sox1P53783 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Sox1P53783 Gm37310-201ENSMUST00000195237 2968 ntBASIC6.13□□□□□ -1.43
Sox1P53783 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Sox1P53783 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sox1P53783 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Sox1P53783 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sox1P53783 Gm24578-201ENSMUST00000103970 129 ntBASIC6.13□□□□□ -1.43
Sox1P53783 Gm13482-201ENSMUST00000119842 254 ntBASIC6.13□□□□□ -1.43
Sox1P53783 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC6.13□□□□□ -1.43
Sox1P53783 Gm12181-201ENSMUST00000121448 531 ntBASIC6.13□□□□□ -1.43
Sox1P53783 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC6.13□□□□□ -1.43
Sox1P53783 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC6.13□□□□□ -1.43
Sox1P53783 Gm13335-201ENSMUST00000129994 471 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Sox1P53783 Gm15974-201ENSMUST00000159103 531 ntBASIC6.13□□□□□ -1.43
Sox1P53783 Gm10319-202ENSMUST00000159439 846 ntBASIC6.13□□□□□ -1.43
Sox1P53783 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC6.13□□□□□ -1.43
Sox1P53783 Gm3141-201ENSMUST00000168726 499 ntBASIC6.13□□□□□ -1.43
Sox1P53783 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC6.13□□□□□ -1.43
Sox1P53783 Gm29086-201ENSMUST00000186774 222 ntBASIC6.13□□□□□ -1.43
Sox1P53783 Gm29085-201ENSMUST00000187108 225 ntBASIC6.13□□□□□ -1.43
Sox1P53783 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC6.13□□□□□ -1.43
Sox1P53783 Gm35648-201ENSMUST00000202304 475 ntBASIC6.13□□□□□ -1.43
Sox1P53783 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC6.13□□□□□ -1.43
Sox1P53783 AC153943.1-201ENSMUST00000219312 256 ntBASIC6.13□□□□□ -1.43
Sox1P53783 AC159256.1-201ENSMUST00000224298 1039 ntBASIC6.13□□□□□ -1.43
Sox1P53783 AC167140.1-201ENSMUST00000224710 403 ntBASIC6.13□□□□□ -1.43
Sox1P53783 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Sox1P53783 Mir449a-201ENSMUST00000083641 91 ntBASIC6.13□□□□□ -1.43
Sox1P53783 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Sox1P53783 Pomp-202ENSMUST00000201120 3850 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Sox1P53783 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Sox1P53783 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sox1P53783 Hbp1-204ENSMUST00000175686 1315 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Sox1P53783 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sox1P53783 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Sox1P53783 Gm37525-201ENSMUST00000193499 2871 ntBASIC6.13□□□□□ -1.43
Sox1P53783 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Sox1P53783 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sox1P53783 Olfr311-203ENSMUST00000216473 2961 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Sox1P53783 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
Sox1P53783 Gm13416-201ENSMUST00000117264 1612 ntBASIC6.13□□□□□ -1.43
Sox1P53783 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Sox1P53783 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC6.13□□□□□ -1.43
Sox1P53783 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Sox1P53783 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Sox1P53783 Olfr1499-202ENSMUST00000216659 1834 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Sox1P53783 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
Sox1P53783 Nav3-201ENSMUST00000032719 9962 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Sox1P53783 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Sox1P53783 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Sox1P53783 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Sox1P53783 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Sox1P53783 Gm43876-201ENSMUST00000203831 3229 ntBASIC6.12□□□□□ -1.43
Sox1P53783 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC6.12□□□□□ -1.43
Sox1P53783 Mir708-201ENSMUST00000102189 109 ntBASIC6.12□□□□□ -1.43
Sox1P53783 Gm24608-201ENSMUST00000104381 136 ntBASIC6.12□□□□□ -1.43
Sox1P53783 Dnah17-203ENSMUST00000106308 14973 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Sox1P53783 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC6.12□□□□□ -1.43
Sox1P53783 Gm11878-201ENSMUST00000117908 400 ntBASIC6.12□□□□□ -1.43
Sox1P53783 Gm8475-201ENSMUST00000118211 526 ntBASIC6.12□□□□□ -1.43
Sox1P53783 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC6.12□□□□□ -1.43
Sox1P53783 Gm14842-201ENSMUST00000119577 269 ntBASIC6.12□□□□□ -1.43
Sox1P53783 Gm15014-201ENSMUST00000120742 258 ntBASIC6.12□□□□□ -1.43
Sox1P53783 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC6.12□□□□□ -1.43
Sox1P53783 Gm23327-201ENSMUST00000157420 78 ntBASIC6.12□□□□□ -1.43
Sox1P53783 Gm23031-201ENSMUST00000157998 119 ntBASIC6.12□□□□□ -1.43
Sox1P53783 Gm24905-201ENSMUST00000158129 104 ntBASIC6.12□□□□□ -1.43
Sox1P53783 Gm15970-201ENSMUST00000160623 834 ntBASIC6.12□□□□□ -1.43
Sox1P53783 Gm16101-201ENSMUST00000160695 430 ntBASIC6.12□□□□□ -1.43
Sox1P53783 Osbpl9-214ENSMUST00000160774 2765 ntTSL 5 BASIC6.12□□□□□ -1.43
Sox1P53783 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Sox1P53783 Otogl-201ENSMUST00000165341 8763 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Sox1P53783 Gm17907-201ENSMUST00000173150 710 ntBASIC6.12□□□□□ -1.43
Sox1P53783 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Sox1P53783 Gm23619-201ENSMUST00000178411 94 ntBASIC6.12□□□□□ -1.43
Sox1P53783 BC035044-202ENSMUST00000178918 466 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
Sox1P53783 Gm22367-201ENSMUST00000178930 132 ntBASIC6.12□□□□□ -1.43
Sox1P53783 Gm25474-201ENSMUST00000179052 94 ntBASIC6.12□□□□□ -1.43
Sox1P53783 Gm22047-201ENSMUST00000179176 94 ntBASIC6.12□□□□□ -1.43
Sox1P53783 Gm27266-201ENSMUST00000184521 123 ntBASIC6.12□□□□□ -1.43
Sox1P53783 Mir7087-201ENSMUST00000184840 70 ntBASIC6.12□□□□□ -1.43
Sox1P53783 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Sox1P53783 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC6.12□□□□□ -1.43
Sox1P53783 Mir142-201ENSMUST00000198092 64 ntBASIC6.12□□□□□ -1.43
Sox1P53783 Gm42643-201ENSMUST00000200504 279 ntBASIC6.12□□□□□ -1.43
Sox1P53783 Gm44248-201ENSMUST00000203079 1549 ntBASIC6.12□□□□□ -1.43
Sox1P53783 Gm16523-202ENSMUST00000203640 4750 ntBASIC6.12□□□□□ -1.43
Sox1P53783 Gm44634-201ENSMUST00000206119 152 ntBASIC6.12□□□□□ -1.43
Sox1P53783 Gm44625-201ENSMUST00000207838 1561 ntBASIC6.12□□□□□ -1.43
Sox1P53783 Gm6011-201ENSMUST00000211736 1796 ntBASIC6.12□□□□□ -1.43
Sox1P53783 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC6.12□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms