Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm37733-201ENSMUST00000195478 2962 ntBASIC4.47□□□□□ -1.69
HttP42859 Minpp1-ps-201ENSMUST00000203344 946 ntBASIC4.47□□□□□ -1.69
HttP42859 AC132237.2-201ENSMUST00000221702 1209 ntBASIC4.47□□□□□ -1.69
HttP42859 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC4.47□□□□□ -1.69
HttP42859 Gm25200-201ENSMUST00000083094 130 ntBASIC4.47□□□□□ -1.69
HttP42859 Frmpd4-201ENSMUST00000112145 7924 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
HttP42859 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
HttP42859 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
HttP42859 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HttP42859 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HttP42859 Thrb-202ENSMUST00000022304 6200 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HttP42859 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HttP42859 Kcnj15-204ENSMUST00000113856 5129 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
HttP42859 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
HttP42859 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC4.46□□□□□ -1.69
HttP42859 Klhl32-203ENSMUST00000108214 5970 ntTSL 5 BASIC4.46□□□□□ -1.69
HttP42859 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
HttP42859 Vmn2r-ps68-201ENSMUST00000173880 861 ntBASIC4.46□□□□□ -1.69
HttP42859 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
HttP42859 Gm33973-201ENSMUST00000195148 534 ntBASIC4.46□□□□□ -1.69
HttP42859 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
HttP42859 Olfr859-201ENSMUST00000086480 930 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
HttP42859 4932431P20Rik-202ENSMUST00000141713 9288 ntBASIC4.46□□□□□ -1.7
HttP42859 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HttP42859 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC4.46□□□□□ -1.7
HttP42859 Gm37011-201ENSMUST00000195543 2935 ntBASIC4.46□□□□□ -1.7
HttP42859 Rnf24-204ENSMUST00000165420 5833 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
HttP42859 Plch1-206ENSMUST00000159676 6560 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
HttP42859 Gm38105-201ENSMUST00000192112 2621 ntBASIC4.46□□□□□ -1.7
HttP42859 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HttP42859 Olfr1384-202ENSMUST00000213776 4437 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
HttP42859 AC123705.2-201ENSMUST00000221653 2009 ntBASIC4.46□□□□□ -1.7
HttP42859 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
HttP42859 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HttP42859 Gm22531-201ENSMUST00000158819 140 ntBASIC4.46□□□□□ -1.7
HttP42859 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC4.46□□□□□ -1.7
HttP42859 Gm26607-201ENSMUST00000180661 867 ntBASIC4.46□□□□□ -1.7
HttP42859 Gm26379-202ENSMUST00000200225 132 ntBASIC4.46□□□□□ -1.7
HttP42859 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
HttP42859 Pcdh9-204ENSMUST00000193901 6127 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HttP42859 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HttP42859 Cdh23-203ENSMUST00000105462 10592 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
HttP42859 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
HttP42859 Epha4-201ENSMUST00000027451 6328 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HttP42859 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
HttP42859 AC153940.1-201ENSMUST00000220149 5300 ntBASIC4.46□□□□□ -1.7
HttP42859 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HttP42859 Slamf7-201ENSMUST00000111276 1082 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
HttP42859 Gm37343-201ENSMUST00000192542 111 ntBASIC4.46□□□□□ -1.7
HttP42859 Gm18537-201ENSMUST00000205709 989 ntBASIC4.46□□□□□ -1.7
HttP42859 Gm9712-201ENSMUST00000210842 311 ntBASIC4.46□□□□□ -1.7
HttP42859 Gm19073-201ENSMUST00000219978 555 ntBASIC4.46□□□□□ -1.7
HttP42859 AC124746.2-201ENSMUST00000226594 427 ntBASIC4.46□□□□□ -1.7
HttP42859 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HttP42859 EPPK1-201ENSMUST00000226781 12325 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
HttP42859 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
HttP42859 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
HttP42859 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
HttP42859 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
HttP42859 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HttP42859 Ccdc127-201ENSMUST00000022063 9559 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HttP42859 Gm42842-201ENSMUST00000197736 3004 ntBASIC4.45□□□□□ -1.7
HttP42859 Gm23226-201ENSMUST00000116927 103 ntBASIC4.45□□□□□ -1.7
HttP42859 Ppp1r2-ps9-201ENSMUST00000173100 549 ntBASIC4.45□□□□□ -1.7
HttP42859 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC4.45□□□□□ -1.7
HttP42859 Gm44023-201ENSMUST00000203710 469 ntBASIC4.45□□□□□ -1.7
HttP42859 Gm13854-201ENSMUST00000121183 1679 ntBASIC4.45□□□□□ -1.7
HttP42859 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HttP42859 Slc4a10-201ENSMUST00000054484 5320 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
HttP42859 Dnm3os-201ENSMUST00000139662 7928 ntBASIC4.45□□□□□ -1.7
HttP42859 Gm37397-201ENSMUST00000194579 2842 ntBASIC4.45□□□□□ -1.7
HttP42859 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HttP42859 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
HttP42859 Gm17167-201ENSMUST00000169242 5054 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HttP42859 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
HttP42859 Vmn1r-ps132-201ENSMUST00000120434 892 ntBASIC4.45□□□□□ -1.7
HttP42859 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HttP42859 Gm23084-201ENSMUST00000157850 114 ntBASIC4.45□□□□□ -1.7
HttP42859 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC4.45□□□□□ -1.7
HttP42859 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC4.45□□□□□ -1.7
HttP42859 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC4.45□□□□□ -1.7
HttP42859 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC4.45□□□□□ -1.7
HttP42859 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HttP42859 AC117949.2-201ENSMUST00000225900 584 ntBASIC4.45□□□□□ -1.7
HttP42859 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
HttP42859 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HttP42859 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HttP42859 Gm45697-201ENSMUST00000212893 2876 ntBASIC4.45□□□□□ -1.7
HttP42859 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
HttP42859 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
HttP42859 Gm20775-201ENSMUST00000100115 1851 ntBASIC4.44□□□□□ -1.7
HttP42859 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HttP42859 Gm17131-201ENSMUST00000164420 3846 ntBASIC4.44□□□□□ -1.7
HttP42859 Gm12704-201ENSMUST00000119789 464 ntBASIC4.44□□□□□ -1.7
HttP42859 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HttP42859 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC4.44□□□□□ -1.7
HttP42859 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HttP42859 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC4.44□□□□□ -1.7
HttP42859 Gm44389-201ENSMUST00000203795 182 ntBASIC4.44□□□□□ -1.7
HttP42859 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC4.44□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms