Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col18a1P39061 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Col18a1P39061 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col18a1P39061 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col18a1P39061 Gm45129-201ENSMUST00000208444 2224 ntBASIC6.66□□□□□ -1.34
Col18a1P39061 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Col18a1P39061 Dixdc1-201ENSMUST00000034566 5709 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Col18a1P39061 Gm3985-201ENSMUST00000132101 2515 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Col18a1P39061 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col18a1P39061 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col18a1P39061 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
Col18a1P39061 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC6.66□□□□□ -1.34
Col18a1P39061 Gm14621-201ENSMUST00000117709 689 ntBASIC6.66□□□□□ -1.34
Col18a1P39061 Gm14883-201ENSMUST00000120179 157 ntBASIC6.66□□□□□ -1.34
Col18a1P39061 Gm13024-201ENSMUST00000121756 718 ntBASIC6.66□□□□□ -1.34
Col18a1P39061 Gm14664-201ENSMUST00000142919 437 ntTSL 3 BASIC6.66□□□□□ -1.34
Col18a1P39061 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC6.66□□□□□ -1.34
Col18a1P39061 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
Col18a1P39061 1700084F23Rik-205ENSMUST00000191362 743 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Col18a1P39061 Gm9236-201ENSMUST00000196892 587 ntBASIC6.66□□□□□ -1.34
Col18a1P39061 Gm9057-201ENSMUST00000198791 296 ntBASIC6.66□□□□□ -1.34
Col18a1P39061 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC6.66□□□□□ -1.34
Col18a1P39061 Gm30155-201ENSMUST00000223458 339 ntBASIC6.66□□□□□ -1.34
Col18a1P39061 CT010480.5-201ENSMUST00000225026 217 ntBASIC6.66□□□□□ -1.34
Col18a1P39061 Olfr209-201ENSMUST00000055868 918 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Col18a1P39061 Gm6369-201ENSMUST00000069626 412 ntBASIC6.66□□□□□ -1.34
Col18a1P39061 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col18a1P39061 Olfr1324-202ENSMUST00000215270 5679 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
Col18a1P39061 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Col18a1P39061 Gm15095-201ENSMUST00000118996 1430 ntBASIC6.66□□□□□ -1.34
Col18a1P39061 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Col18a1P39061 G630018N14Rik-203ENSMUST00000221171 5888 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Col18a1P39061 Gm45183-201ENSMUST00000207937 1497 ntBASIC6.66□□□□□ -1.34
Col18a1P39061 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col18a1P39061 Dip2b-203ENSMUST00000108971 8127 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Col18a1P39061 AC153955.2-201ENSMUST00000216739 4129 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Col18a1P39061 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Col18a1P39061 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Col18a1P39061 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Col18a1P39061 Gm42551-201ENSMUST00000197701 1573 ntBASIC6.65□□□□□ -1.34
Col18a1P39061 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Col18a1P39061 Gm45853-201ENSMUST00000212310 3171 ntBASIC6.65□□□□□ -1.34
Col18a1P39061 Gm15603-201ENSMUST00000119252 492 ntBASIC6.65□□□□□ -1.34
Col18a1P39061 Gm24689-201ENSMUST00000157760 104 ntBASIC6.65□□□□□ -1.34
Col18a1P39061 Gm25923-201ENSMUST00000158312 138 ntBASIC6.65□□□□□ -1.34
Col18a1P39061 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Col18a1P39061 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
Col18a1P39061 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Col18a1P39061 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Col18a1P39061 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC6.65□□□□□ -1.34
Col18a1P39061 Gm13249-201ENSMUST00000177803 345 ntBASIC6.65□□□□□ -1.34
Col18a1P39061 Gm13144-201ENSMUST00000179385 345 ntBASIC6.65□□□□□ -1.34
Col18a1P39061 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Col18a1P39061 Gm29513-201ENSMUST00000185741 202 ntBASIC6.65□□□□□ -1.34
Col18a1P39061 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Col18a1P39061 Gm30280-201ENSMUST00000192214 262 ntBASIC6.65□□□□□ -1.34
Col18a1P39061 Gm38011-201ENSMUST00000193312 279 ntBASIC6.65□□□□□ -1.34
Col18a1P39061 Gm37152-201ENSMUST00000193369 1175 ntBASIC6.65□□□□□ -1.34
Col18a1P39061 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC6.65□□□□□ -1.34
Col18a1P39061 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC6.65□□□□□ -1.34
Col18a1P39061 AC155922.1-201ENSMUST00000220100 373 ntBASIC6.65□□□□□ -1.34
Col18a1P39061 Gm18940-201ENSMUST00000222518 871 ntBASIC6.65□□□□□ -1.34
Col18a1P39061 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Col18a1P39061 E330017A01Rik-201ENSMUST00000053249 1108 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Col18a1P39061 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Col18a1P39061 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Col18a1P39061 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Col18a1P39061 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Col18a1P39061 Gm43121-201ENSMUST00000199065 1305 ntBASIC6.65□□□□□ -1.34
Col18a1P39061 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Col18a1P39061 AC183268.1-201ENSMUST00000215753 2837 ntBASIC6.65□□□□□ -1.35
Col18a1P39061 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC6.65□□□□□ -1.35
Col18a1P39061 Ep400-201ENSMUST00000041558 10608 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.35
Col18a1P39061 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Col18a1P39061 Gm42548-201ENSMUST00000202669 3933 ntBASIC6.65□□□□□ -1.35
Col18a1P39061 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Col18a1P39061 Gm29730-201ENSMUST00000192986 1396 ntBASIC6.65□□□□□ -1.35
Col18a1P39061 Gm12633-201ENSMUST00000117742 1705 ntBASIC6.65□□□□□ -1.35
Col18a1P39061 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
Col18a1P39061 Gm42645-201ENSMUST00000201573 1627 ntBASIC6.64□□□□□ -1.35
Col18a1P39061 AC120375.1-201ENSMUST00000227034 3612 ntBASIC6.64□□□□□ -1.35
Col18a1P39061 Gm23942-201ENSMUST00000101956 107 ntBASIC6.64□□□□□ -1.35
Col18a1P39061 Gm24142-201ENSMUST00000101960 107 ntBASIC6.64□□□□□ -1.35
Col18a1P39061 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Col18a1P39061 Gm7974-201ENSMUST00000117154 408 ntBASIC6.64□□□□□ -1.35
Col18a1P39061 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC6.64□□□□□ -1.35
Col18a1P39061 Gm13815-201ENSMUST00000119963 412 ntBASIC6.64□□□□□ -1.35
Col18a1P39061 Gm9001-201ENSMUST00000121642 399 ntBASIC6.64□□□□□ -1.35
Col18a1P39061 Gm13194-201ENSMUST00000142299 311 ntBASIC6.64□□□□□ -1.35
Col18a1P39061 Gm27805-201ENSMUST00000184513 79 ntBASIC6.64□□□□□ -1.35
Col18a1P39061 Gm7654-201ENSMUST00000186738 683 ntBASIC6.64□□□□□ -1.35
Col18a1P39061 Gm28396-201ENSMUST00000190309 379 ntBASIC6.64□□□□□ -1.35
Col18a1P39061 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC6.64□□□□□ -1.35
Col18a1P39061 Gm5317-201ENSMUST00000204445 847 ntBASIC6.64□□□□□ -1.35
Col18a1P39061 Gm5338-201ENSMUST00000209530 639 ntBASIC6.64□□□□□ -1.35
Col18a1P39061 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC6.64□□□□□ -1.35
Col18a1P39061 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Col18a1P39061 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Col18a1P39061 Gm42531-201ENSMUST00000201648 4048 ntBASIC6.64□□□□□ -1.35
Col18a1P39061 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC6.64□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms