Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm18306-201ENSMUST00000207338 569 ntBASIC4.97□□□□□ -1.61
Col2a1P28481 Gm45539-201ENSMUST00000210313 428 ntBASIC4.97□□□□□ -1.61
Col2a1P28481 CT030242.2-201ENSMUST00000221588 148 ntBASIC4.97□□□□□ -1.61
Col2a1P28481 AC168059.1-201ENSMUST00000225846 841 ntBASIC4.97□□□□□ -1.61
Col2a1P28481 AC160756.1-201ENSMUST00000227266 235 ntBASIC4.97□□□□□ -1.61
Col2a1P28481 AC131997.2-201ENSMUST00000227452 362 ntBASIC4.97□□□□□ -1.61
Col2a1P28481 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
Col2a1P28481 Gm43374-201ENSMUST00000202498 2391 ntBASIC4.97□□□□□ -1.61
Col2a1P28481 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Col2a1P28481 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Col2a1P28481 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
Col2a1P28481 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Col2a1P28481 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Col2a1P28481 Olfr765-202ENSMUST00000216460 2594 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
Col2a1P28481 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
Col2a1P28481 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
Col2a1P28481 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC4.96□□□□□ -1.62
Col2a1P28481 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC4.96□□□□□ -1.62
Col2a1P28481 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC4.96□□□□□ -1.62
Col2a1P28481 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC4.96□□□□□ -1.62
Col2a1P28481 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
Col2a1P28481 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC4.96□□□□□ -1.62
Col2a1P28481 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Col2a1P28481 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC4.96□□□□□ -1.62
Col2a1P28481 CT030662.2-201ENSMUST00000226942 805 ntBASIC4.96□□□□□ -1.62
Col2a1P28481 Plch1-209ENSMUST00000161052 1472 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Col2a1P28481 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Col2a1P28481 Gm45378-201ENSMUST00000211063 2711 ntBASIC4.96□□□□□ -1.62
Col2a1P28481 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC4.96□□□□□ -1.62
Col2a1P28481 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC4.96□□□□□ -1.62
Col2a1P28481 Olfr1079-202ENSMUST00000111582 2141 ntAPPRIS ALT2 TSL 3 BASIC4.96□□□□□ -1.62
Col2a1P28481 Gm13058-201ENSMUST00000117097 1435 ntBASIC4.96□□□□□ -1.62
Col2a1P28481 Svet1-201ENSMUST00000209370 3940 ntBASIC4.96□□□□□ -1.62
Col2a1P28481 Olfr2-206ENSMUST00000216375 5828 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
Col2a1P28481 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC4.95□□□□□ -1.62
Col2a1P28481 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Col2a1P28481 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC4.95□□□□□ -1.62
Col2a1P28481 Gm22269-201ENSMUST00000104002 130 ntBASIC4.95□□□□□ -1.62
Col2a1P28481 Gm14716-201ENSMUST00000120138 718 ntBASIC4.95□□□□□ -1.62
Col2a1P28481 Clec2f-201ENSMUST00000121051 374 ntBASIC4.95□□□□□ -1.62
Col2a1P28481 Gm23215-201ENSMUST00000178153 121 ntBASIC4.95□□□□□ -1.62
Col2a1P28481 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC4.95□□□□□ -1.62
Col2a1P28481 Gm28471-201ENSMUST00000185994 615 ntBASIC4.95□□□□□ -1.62
Col2a1P28481 Gm28195-201ENSMUST00000186992 372 ntBASIC4.95□□□□□ -1.62
Col2a1P28481 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC4.95□□□□□ -1.62
Col2a1P28481 Gm5660-201ENSMUST00000197453 1149 ntBASIC4.95□□□□□ -1.62
Col2a1P28481 1110060G06Rik-201ENSMUST00000200372 499 ntBASIC4.95□□□□□ -1.62
Col2a1P28481 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC4.95□□□□□ -1.62
Col2a1P28481 Gm45845-201ENSMUST00000207326 582 ntBASIC4.95□□□□□ -1.62
Col2a1P28481 Gm4501-201ENSMUST00000207330 551 ntBASIC4.95□□□□□ -1.62
Col2a1P28481 Gm4558-201ENSMUST00000207886 521 ntBASIC4.95□□□□□ -1.62
Col2a1P28481 Gm44582-201ENSMUST00000209125 445 ntBASIC4.95□□□□□ -1.62
Col2a1P28481 Gm45727-201ENSMUST00000212886 572 ntBASIC4.95□□□□□ -1.62
Col2a1P28481 Gm19154-201ENSMUST00000223330 940 ntBASIC4.95□□□□□ -1.62
Col2a1P28481 AC154358.1-201ENSMUST00000224871 218 ntBASIC4.95□□□□□ -1.62
Col2a1P28481 Olfr875-201ENSMUST00000080634 1004 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Col2a1P28481 Gm23510-201ENSMUST00000083083 163 ntBASIC4.95□□□□□ -1.62
Col2a1P28481 Gm26165-201ENSMUST00000083791 138 ntBASIC4.95□□□□□ -1.62
Col2a1P28481 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Col2a1P28481 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Col2a1P28481 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC4.95□□□□□ -1.62
Col2a1P28481 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Col2a1P28481 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC4.95□□□□□ -1.62
Col2a1P28481 4930421C12Rik-201ENSMUST00000200814 1574 ntBASIC4.95□□□□□ -1.62
Col2a1P28481 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Col2a1P28481 Gm13785-201ENSMUST00000119099 690 ntBASIC4.94□□□□□ -1.62
Col2a1P28481 Gm1866-201ENSMUST00000120701 477 ntBASIC4.94□□□□□ -1.62
Col2a1P28481 Gm22135-201ENSMUST00000158752 108 ntBASIC4.94□□□□□ -1.62
Col2a1P28481 Mir6996-201ENSMUST00000183922 61 ntBASIC4.94□□□□□ -1.62
Col2a1P28481 Gm28830-201ENSMUST00000188192 213 ntBASIC4.94□□□□□ -1.62
Col2a1P28481 Gm38150-201ENSMUST00000192996 452 ntBASIC4.94□□□□□ -1.62
Col2a1P28481 Olfr8-202ENSMUST00000203851 1009 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
Col2a1P28481 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC4.94□□□□□ -1.62
Col2a1P28481 Gm6171-201ENSMUST00000220760 645 ntBASIC4.94□□□□□ -1.62
Col2a1P28481 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Col2a1P28481 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC4.94□□□□□ -1.62
Col2a1P28481 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Col2a1P28481 Gm37936-201ENSMUST00000194647 1322 ntBASIC4.94□□□□□ -1.62
Col2a1P28481 Dpp10-202ENSMUST00000112606 15297 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Col2a1P28481 Olfr1305-202ENSMUST00000213405 1815 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Col2a1P28481 Gm42548-201ENSMUST00000202669 3933 ntBASIC4.94□□□□□ -1.62
Col2a1P28481 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Col2a1P28481 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
Col2a1P28481 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Col2a1P28481 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Col2a1P28481 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Col2a1P28481 4930503E14Rik-201ENSMUST00000100688 1287 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Col2a1P28481 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Col2a1P28481 Gm13386-201ENSMUST00000117677 124 ntBASIC4.94□□□□□ -1.62
Col2a1P28481 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC4.94□□□□□ -1.62
Col2a1P28481 Gm12978-201ENSMUST00000121250 522 ntBASIC4.94□□□□□ -1.62
Col2a1P28481 Gm25177-201ENSMUST00000122634 117 ntBASIC4.94□□□□□ -1.62
Col2a1P28481 Gm25058-201ENSMUST00000157365 128 ntBASIC4.94□□□□□ -1.62
Col2a1P28481 Gm37501-201ENSMUST00000192830 691 ntBASIC4.94□□□□□ -1.62
Col2a1P28481 Gm43774-201ENSMUST00000196327 878 ntBASIC4.94□□□□□ -1.62
Col2a1P28481 Gm43405-201ENSMUST00000198642 337 ntBASIC4.94□□□□□ -1.62
Col2a1P28481 Gm35702-201ENSMUST00000198653 511 ntBASIC4.94□□□□□ -1.62
Col2a1P28481 Gm17887-201ENSMUST00000200194 547 ntBASIC4.94□□□□□ -1.62
Col2a1P28481 Gm44871-201ENSMUST00000207821 497 ntBASIC4.94□□□□□ -1.62
Col2a1P28481 Gm18377-201ENSMUST00000215141 607 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms