Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm37192-201ENSMUST00000194479 1348 ntBASIC3.71□□□□□ -1.81
Sdc1P18828 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.81
Sdc1P18828 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
Sdc1P18828 Gm38235-201ENSMUST00000194600 4952 ntBASIC3.71□□□□□ -1.82
Sdc1P18828 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
Sdc1P18828 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Sdc1P18828 Gm23322-201ENSMUST00000104464 167 ntBASIC3.71□□□□□ -1.82
Sdc1P18828 Gm11905-201ENSMUST00000117653 678 ntBASIC3.71□□□□□ -1.82
Sdc1P18828 Gm14706-201ENSMUST00000117744 255 ntBASIC3.71□□□□□ -1.82
Sdc1P18828 Gm15021-201ENSMUST00000117832 742 ntBASIC3.71□□□□□ -1.82
Sdc1P18828 Gm14878-201ENSMUST00000118167 293 ntBASIC3.71□□□□□ -1.82
Sdc1P18828 Gm14836-201ENSMUST00000118567 471 ntBASIC3.71□□□□□ -1.82
Sdc1P18828 Gm11262-201ENSMUST00000119326 833 ntBASIC3.71□□□□□ -1.82
Sdc1P18828 Gm15803-201ENSMUST00000120118 394 ntBASIC3.71□□□□□ -1.82
Sdc1P18828 Gm11677-201ENSMUST00000121349 977 ntBASIC3.71□□□□□ -1.82
Sdc1P18828 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC3.71□□□□□ -1.82
Sdc1P18828 Gm23903-201ENSMUST00000157566 131 ntBASIC3.71□□□□□ -1.82
Sdc1P18828 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC3.71□□□□□ -1.82
Sdc1P18828 Gm28924-201ENSMUST00000190012 241 ntBASIC3.71□□□□□ -1.82
Sdc1P18828 Gm19087-201ENSMUST00000191430 946 ntBASIC3.71□□□□□ -1.82
Sdc1P18828 Gm37436-201ENSMUST00000193842 1085 ntBASIC3.71□□□□□ -1.82
Sdc1P18828 Gm17954-201ENSMUST00000195893 607 ntBASIC3.71□□□□□ -1.82
Sdc1P18828 Gm42610-201ENSMUST00000196557 650 ntTSL 3 BASIC3.71□□□□□ -1.82
Sdc1P18828 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC3.71□□□□□ -1.82
Sdc1P18828 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Sdc1P18828 Tas2r146-ps1-201ENSMUST00000203065 934 ntBASIC3.71□□□□□ -1.82
Sdc1P18828 Gm45317-201ENSMUST00000210385 223 ntBASIC3.71□□□□□ -1.82
Sdc1P18828 Gm36247-201ENSMUST00000211834 285 ntBASIC3.71□□□□□ -1.82
Sdc1P18828 AC112956.1-201ENSMUST00000213563 492 ntBASIC3.71□□□□□ -1.82
Sdc1P18828 Gm39302-201ENSMUST00000215184 636 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Sdc1P18828 Gm46223-201ENSMUST00000215196 675 ntBASIC3.71□□□□□ -1.82
Sdc1P18828 Gm3942-201ENSMUST00000218495 666 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Sdc1P18828 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Sdc1P18828 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC3.71□□□□□ -1.82
Sdc1P18828 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC3.71□□□□□ -1.82
Sdc1P18828 AC151902.1-201ENSMUST00000227800 375 ntBASIC3.71□□□□□ -1.82
Sdc1P18828 Olfr202-201ENSMUST00000049859 924 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Sdc1P18828 Olfr1495-201ENSMUST00000061669 1089 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Sdc1P18828 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Sdc1P18828 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
Sdc1P18828 Olfr8-201ENSMUST00000081571 933 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Sdc1P18828 Gm25140-201ENSMUST00000083254 140 ntBASIC3.71□□□□□ -1.82
Sdc1P18828 Gm42447-201ENSMUST00000200102 2903 ntBASIC3.71□□□□□ -1.82
Sdc1P18828 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Sdc1P18828 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Sdc1P18828 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC3.71□□□□□ -1.82
Sdc1P18828 Gm43320-201ENSMUST00000196047 2916 ntBASIC3.71□□□□□ -1.82
Sdc1P18828 Hbp1-204ENSMUST00000175686 1315 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Sdc1P18828 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Sdc1P18828 Gm10727-201ENSMUST00000197107 1602 ntBASIC3.7□□□□□ -1.82
Sdc1P18828 Gm7195-201ENSMUST00000190869 1707 ntBASIC3.7□□□□□ -1.82
Sdc1P18828 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC3.7□□□□□ -1.82
Sdc1P18828 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Sdc1P18828 Gm22472-201ENSMUST00000104115 134 ntBASIC3.7□□□□□ -1.82
Sdc1P18828 Gm14750-201ENSMUST00000118262 516 ntBASIC3.7□□□□□ -1.82
Sdc1P18828 Gm13579-201ENSMUST00000118519 517 ntBASIC3.7□□□□□ -1.82
Sdc1P18828 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC3.7□□□□□ -1.82
Sdc1P18828 Gm24380-201ENSMUST00000122696 324 ntBASIC3.7□□□□□ -1.82
Sdc1P18828 Mir1900-201ENSMUST00000122714 78 ntBASIC3.7□□□□□ -1.82
Sdc1P18828 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC3.7□□□□□ -1.82
Sdc1P18828 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC3.7□□□□□ -1.82
Sdc1P18828 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC3.7□□□□□ -1.82
Sdc1P18828 Gm25117-201ENSMUST00000157194 144 ntBASIC3.7□□□□□ -1.82
Sdc1P18828 Gm23959-201ENSMUST00000157208 324 ntBASIC3.7□□□□□ -1.82
Sdc1P18828 Gm25489-201ENSMUST00000158727 141 ntBASIC3.7□□□□□ -1.82
Sdc1P18828 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC3.7□□□□□ -1.82
Sdc1P18828 Gm6650-201ENSMUST00000166710 614 ntBASIC3.7□□□□□ -1.82
Sdc1P18828 Vmn2r-ps64-201ENSMUST00000173690 523 ntBASIC3.7□□□□□ -1.82
Sdc1P18828 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Sdc1P18828 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Sdc1P18828 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
Sdc1P18828 Gm2539-203ENSMUST00000181352 746 ntBASIC3.7□□□□□ -1.82
Sdc1P18828 Mir6417-201ENSMUST00000183815 116 ntBASIC3.7□□□□□ -1.82
Sdc1P18828 Mir7087-201ENSMUST00000184840 70 ntBASIC3.7□□□□□ -1.82
Sdc1P18828 1810053B23Rik-201ENSMUST00000185242 634 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Sdc1P18828 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC3.7□□□□□ -1.82
Sdc1P18828 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC3.7□□□□□ -1.82
Sdc1P18828 Gm28188-201ENSMUST00000190483 236 ntBASIC3.7□□□□□ -1.82
Sdc1P18828 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC3.7□□□□□ -1.82
Sdc1P18828 Gm37601-201ENSMUST00000194922 394 ntBASIC3.7□□□□□ -1.82
Sdc1P18828 Gm9173-201ENSMUST00000198054 400 ntBASIC3.7□□□□□ -1.82
Sdc1P18828 Mir219c-201ENSMUST00000199860 60 ntBASIC3.7□□□□□ -1.82
Sdc1P18828 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC3.7□□□□□ -1.82
Sdc1P18828 Gm31532-201ENSMUST00000203555 767 ntBASIC3.7□□□□□ -1.82
Sdc1P18828 Gm44059-201ENSMUST00000204048 351 ntBASIC3.7□□□□□ -1.82
Sdc1P18828 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC3.7□□□□□ -1.82
Sdc1P18828 Gm44816-201ENSMUST00000206666 477 ntBASIC3.7□□□□□ -1.82
Sdc1P18828 Gm44724-203ENSMUST00000208430 998 ntTSL 5 BASIC3.7□□□□□ -1.82
Sdc1P18828 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC3.7□□□□□ -1.82
Sdc1P18828 Gm7128-201ENSMUST00000211639 533 ntBASIC3.7□□□□□ -1.82
Sdc1P18828 AC132104.1-201ENSMUST00000213615 260 ntBASIC3.7□□□□□ -1.82
Sdc1P18828 Gm21041-201ENSMUST00000214829 823 ntBASIC3.7□□□□□ -1.82
Sdc1P18828 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Sdc1P18828 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
Sdc1P18828 Gm19256-201ENSMUST00000218550 231 ntBASIC3.7□□□□□ -1.82
Sdc1P18828 Gm4928-201ENSMUST00000219622 850 ntBASIC3.7□□□□□ -1.82
Sdc1P18828 AC158523.1-201ENSMUST00000221398 328 ntBASIC3.7□□□□□ -1.82
Sdc1P18828 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC3.7□□□□□ -1.82
Sdc1P18828 Olfr209-201ENSMUST00000055868 918 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Sdc1P18828 Olfr147-201ENSMUST00000056364 1166 ntAPPRIS P2 TSL 2 BASIC3.7□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms