Protein–RNA interactions for Protein: P07309

Ttr, Transthyretin, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TtrP07309 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
TtrP07309 Gm12073-201ENSMUST00000117382 524 ntBASIC3.19□□□□□ -1.9
TtrP07309 Gm13687-201ENSMUST00000119857 282 ntBASIC3.19□□□□□ -1.9
TtrP07309 Gm14875-201ENSMUST00000120881 319 ntBASIC3.19□□□□□ -1.9
TtrP07309 Gm14500-201ENSMUST00000121647 113 ntBASIC3.19□□□□□ -1.9
TtrP07309 Gm11349-201ENSMUST00000122209 1116 ntBASIC3.19□□□□□ -1.9
TtrP07309 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC3.19□□□□□ -1.9
TtrP07309 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC3.19□□□□□ -1.9
TtrP07309 Gm4660-201ENSMUST00000131499 403 ntBASIC3.19□□□□□ -1.9
TtrP07309 Gm12735-201ENSMUST00000146218 651 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TtrP07309 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TtrP07309 Gm24507-201ENSMUST00000157683 134 ntBASIC3.19□□□□□ -1.9
TtrP07309 Mir1946a-201ENSMUST00000158360 134 ntBASIC3.19□□□□□ -1.9
TtrP07309 Gm24860-201ENSMUST00000158457 276 ntBASIC3.19□□□□□ -1.9
TtrP07309 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC3.19□□□□□ -1.9
TtrP07309 Gm8837-201ENSMUST00000161037 1107 ntBASIC3.19□□□□□ -1.9
TtrP07309 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
TtrP07309 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
TtrP07309 Mir3080-201ENSMUST00000175010 79 ntBASIC3.19□□□□□ -1.9
TtrP07309 Gm29320-201ENSMUST00000185235 615 ntBASIC3.19□□□□□ -1.9
TtrP07309 Gm29179-202ENSMUST00000186138 615 ntBASIC3.19□□□□□ -1.9
TtrP07309 Gm29448-201ENSMUST00000186675 615 ntBASIC3.19□□□□□ -1.9
TtrP07309 Gm29314-201ENSMUST00000186800 615 ntBASIC3.19□□□□□ -1.9
TtrP07309 Gm28097-201ENSMUST00000187333 366 ntBASIC3.19□□□□□ -1.9
TtrP07309 Gm29159-201ENSMUST00000187969 379 ntBASIC3.19□□□□□ -1.9
TtrP07309 Gm28253-202ENSMUST00000187971 615 ntBASIC3.19□□□□□ -1.9
TtrP07309 Gm5252-201ENSMUST00000189030 909 ntBASIC3.19□□□□□ -1.9
TtrP07309 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TtrP07309 Gm29169-201ENSMUST00000189835 615 ntBASIC3.19□□□□□ -1.9
TtrP07309 Gm36964-201ENSMUST00000191876 198 ntBASIC3.19□□□□□ -1.9
TtrP07309 Gm19231-201ENSMUST00000193212 830 ntBASIC3.19□□□□□ -1.9
TtrP07309 Gm37111-201ENSMUST00000193250 634 ntBASIC3.19□□□□□ -1.9
TtrP07309 Gm8861-201ENSMUST00000196346 832 ntBASIC3.19□□□□□ -1.9
TtrP07309 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC3.19□□□□□ -1.9
TtrP07309 Gm45006-201ENSMUST00000206078 690 ntBASIC3.19□□□□□ -1.9
TtrP07309 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TtrP07309 Gm32916-203ENSMUST00000208033 789 ntTSL 5 BASIC3.19□□□□□ -1.9
TtrP07309 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC3.19□□□□□ -1.9
TtrP07309 Gm3816-201ENSMUST00000209803 433 ntBASIC3.19□□□□□ -1.9
TtrP07309 Gm45485-201ENSMUST00000211229 357 ntBASIC3.19□□□□□ -1.9
TtrP07309 Gm3690-201ENSMUST00000211341 262 ntBASIC3.19□□□□□ -1.9
TtrP07309 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TtrP07309 Gm39197-201ENSMUST00000212069 457 ntBASIC3.19□□□□□ -1.9
TtrP07309 Olfr228-201ENSMUST00000216534 942 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
TtrP07309 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC3.19□□□□□ -1.9
TtrP07309 AC126554.4-201ENSMUST00000221055 409 ntBASIC3.19□□□□□ -1.9
TtrP07309 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC3.19□□□□□ -1.9
TtrP07309 AC154335.1-201ENSMUST00000224744 395 ntBASIC3.19□□□□□ -1.9
TtrP07309 AC154335.2-201ENSMUST00000225916 638 ntBASIC3.19□□□□□ -1.9
TtrP07309 AC192088.3-201ENSMUST00000227858 831 ntBASIC3.19□□□□□ -1.9
TtrP07309 AC125539.2-201ENSMUST00000228339 753 ntBASIC3.19□□□□□ -1.9
TtrP07309 Clec2j-201ENSMUST00000032517 515 ntBASIC3.19□□□□□ -1.9
TtrP07309 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
TtrP07309 Gm23796-201ENSMUST00000084011 160 ntBASIC3.19□□□□□ -1.9
TtrP07309 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TtrP07309 Olfr1162-201ENSMUST00000099837 945 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
TtrP07309 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
TtrP07309 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TtrP07309 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TtrP07309 Olfr672-202ENSMUST00000213942 1490 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
TtrP07309 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TtrP07309 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC3.19□□□□□ -1.9
TtrP07309 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TtrP07309 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
TtrP07309 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
TtrP07309 Gm37192-201ENSMUST00000194479 1348 ntBASIC3.19□□□□□ -1.9
TtrP07309 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.18□□□□□ -1.9
TtrP07309 Gm37211-201ENSMUST00000193392 3433 ntBASIC3.18□□□□□ -1.9
TtrP07309 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TtrP07309 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
TtrP07309 AC154677.1-201ENSMUST00000227636 2805 ntBASIC3.18□□□□□ -1.9
TtrP07309 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC3.18□□□□□ -1.9
TtrP07309 Gm37718-201ENSMUST00000191655 2631 ntBASIC3.18□□□□□ -1.9
TtrP07309 Gm8744-201ENSMUST00000204475 3581 ntBASIC3.18□□□□□ -1.9
TtrP07309 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
TtrP07309 Zfp11-201ENSMUST00000049778 3929 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TtrP07309 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
TtrP07309 Gm24124-201ENSMUST00000104103 132 ntBASIC3.18□□□□□ -1.9
TtrP07309 Rpl36a-201ENSMUST00000113211 483 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TtrP07309 Gm14304-201ENSMUST00000117272 446 ntBASIC3.18□□□□□ -1.9
TtrP07309 Gm8145-201ENSMUST00000118220 745 ntBASIC3.18□□□□□ -1.9
TtrP07309 Gm3267-201ENSMUST00000118671 473 ntBASIC3.18□□□□□ -1.9
TtrP07309 Gm11481-201ENSMUST00000120069 255 ntBASIC3.18□□□□□ -1.9
TtrP07309 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC3.18□□□□□ -1.9
TtrP07309 Gm23179-201ENSMUST00000158693 304 ntBASIC3.18□□□□□ -1.9
TtrP07309 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
TtrP07309 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
TtrP07309 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
TtrP07309 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC3.18□□□□□ -1.9
TtrP07309 Gm18560-201ENSMUST00000173463 1123 ntBASIC3.18□□□□□ -1.9
TtrP07309 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
TtrP07309 Gm27039-201ENSMUST00000182438 962 ntBASIC3.18□□□□□ -1.9
TtrP07309 Gm27960-201ENSMUST00000183445 184 ntBASIC3.18□□□□□ -1.9
TtrP07309 Mir6244-201ENSMUST00000184156 117 ntBASIC3.18□□□□□ -1.9
TtrP07309 Gm27551-201ENSMUST00000184258 77 ntBASIC3.18□□□□□ -1.9
TtrP07309 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC3.18□□□□□ -1.9
TtrP07309 Gm28471-201ENSMUST00000185994 615 ntBASIC3.18□□□□□ -1.9
TtrP07309 Gm28598-201ENSMUST00000186490 615 ntBASIC3.18□□□□□ -1.9
TtrP07309 Gm29281-201ENSMUST00000188077 381 ntBASIC3.18□□□□□ -1.9
TtrP07309 Gm29268-201ENSMUST00000188669 615 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms