Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 Gm5260-201ENSMUST00000186157 949 ntBASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 1700084F23Rik-205ENSMUST00000191362 743 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 Gm37135-201ENSMUST00000192652 534 ntBASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 Gm42999-201ENSMUST00000198049 786 ntBASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 Gm44955-201ENSMUST00000208843 229 ntTSL 5 BASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 AC153845.2-203ENSMUST00000215889 617 ntTSL 3 BASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 AC101677.1-201ENSMUST00000218590 158 ntBASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 Olfr1112-201ENSMUST00000053050 957 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 Gm36936-201ENSMUST00000194508 2749 ntBASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 Gm44586-201ENSMUST00000207166 2737 ntBASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 Gm44678-201ENSMUST00000207828 2775 ntBASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Pcdh1F7BJK1 Olfr300-ps1-201ENSMUST00000174262 2395 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 Gm42600-201ENSMUST00000202081 3588 ntBASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 Gm42536-201ENSMUST00000197562 1613 ntBASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 Gm22499-201ENSMUST00000104501 135 ntBASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 Gm15382-201ENSMUST00000118011 537 ntBASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 Gm11843-201ENSMUST00000118984 425 ntBASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 Gm14018-201ENSMUST00000119042 455 ntBASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 Gm16074-201ENSMUST00000119524 444 ntBASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 Gm11890-201ENSMUST00000119585 417 ntBASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 Defa-ps11-201ENSMUST00000119719 299 ntBASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 Gm12837-201ENSMUST00000120131 373 ntBASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 Gm7071-201ENSMUST00000120458 462 ntBASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 Mir5106-201ENSMUST00000174936 73 ntBASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 Gm22646-201ENSMUST00000175130 115 ntBASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 Gm26970-201ENSMUST00000182990 964 ntBASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 Mhrt-202ENSMUST00000185798 447 ntTSL 3 BASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 Gm9127-201ENSMUST00000188041 985 ntBASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 Gm5983-201ENSMUST00000197739 770 ntBASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 Gm43849-201ENSMUST00000201086 215 ntBASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 Gm45063-201ENSMUST00000203726 472 ntBASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 Gm44134-202ENSMUST00000204777 545 ntBASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 Gm44634-201ENSMUST00000206119 152 ntBASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 Klk1b23-ps-201ENSMUST00000206347 345 ntBASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 Gm45870-201ENSMUST00000211269 601 ntBASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 Gm18891-201ENSMUST00000216734 1087 ntBASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 Gm7413-201ENSMUST00000219498 462 ntBASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 AC153924.1-201ENSMUST00000220117 312 ntBASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 CR974592.1-201ENSMUST00000220422 574 ntBASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 Gm19441-201ENSMUST00000221545 330 ntBASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 AC153662.1-201ENSMUST00000222220 270 ntBASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 AC173481.1-201ENSMUST00000223351 270 ntBASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 Reg3g-201ENSMUST00000032089 771 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 Gm26442-201ENSMUST00000082588 153 ntBASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 Olfr191-202ENSMUST00000215647 3857 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Pcdh1F7BJK1 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 139.4 ms