Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm44668-201ENSMUST00000207911 3265 ntBASIC4.44□□□□□ -1.7
Trim3Q9R1R2 Ankrd28-204ENSMUST00000227089 3522 ntBASIC4.44□□□□□ -1.7
Trim3Q9R1R2 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC4.44□□□□□ -1.7
Trim3Q9R1R2 Olfr1500-202ENSMUST00000214475 2697 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Trim3Q9R1R2 Olfr1176-202ENSMUST00000213778 2823 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Trim3Q9R1R2 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Trim3Q9R1R2 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC4.44□□□□□ -1.7
Trim3Q9R1R2 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Trim3Q9R1R2 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
Trim3Q9R1R2 Plch1-209ENSMUST00000161052 1472 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Trim3Q9R1R2 Olfr1049-202ENSMUST00000216185 1471 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Trim3Q9R1R2 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Trim3Q9R1R2 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Trim3Q9R1R2 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Trim3Q9R1R2 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Trim3Q9R1R2 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC4.43□□□□□ -1.7
Trim3Q9R1R2 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Trim3Q9R1R2 Gm37588-201ENSMUST00000195024 2496 ntBASIC4.43□□□□□ -1.7
Trim3Q9R1R2 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Trim3Q9R1R2 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Trim3Q9R1R2 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
Trim3Q9R1R2 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Trim3Q9R1R2 Gm12285-201ENSMUST00000117347 233 ntBASIC4.43□□□□□ -1.7
Trim3Q9R1R2 Gm16128-201ENSMUST00000117855 626 ntBASIC4.43□□□□□ -1.7
Trim3Q9R1R2 Gm13491-201ENSMUST00000118267 235 ntBASIC4.43□□□□□ -1.7
Trim3Q9R1R2 Gm12807-201ENSMUST00000121546 962 ntBASIC4.43□□□□□ -1.7
Trim3Q9R1R2 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC4.43□□□□□ -1.7
Trim3Q9R1R2 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC4.43□□□□□ -1.7
Trim3Q9R1R2 Gm25103-201ENSMUST00000122671 318 ntBASIC4.43□□□□□ -1.7
Trim3Q9R1R2 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC4.43□□□□□ -1.7
Trim3Q9R1R2 Gm24217-201ENSMUST00000158260 133 ntBASIC4.43□□□□□ -1.7
Trim3Q9R1R2 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Trim3Q9R1R2 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC4.43□□□□□ -1.7
Trim3Q9R1R2 Gm28389-201ENSMUST00000190090 697 ntBASIC4.43□□□□□ -1.7
Trim3Q9R1R2 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC4.43□□□□□ -1.7
Trim3Q9R1R2 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC4.43□□□□□ -1.7
Trim3Q9R1R2 Gm43894-201ENSMUST00000203274 688 ntBASIC4.43□□□□□ -1.7
Trim3Q9R1R2 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Trim3Q9R1R2 AC125399.1-201ENSMUST00000224236 595 ntBASIC4.43□□□□□ -1.7
Trim3Q9R1R2 AC131117.2-203ENSMUST00000225886 950 ntBASIC4.43□□□□□ -1.7
Trim3Q9R1R2 CT030662.3-201ENSMUST00000228751 476 ntBASIC4.43□□□□□ -1.7
Trim3Q9R1R2 Ear6-201ENSMUST00000074477 713 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Trim3Q9R1R2 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Trim3Q9R1R2 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Trim3Q9R1R2 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Trim3Q9R1R2 Gm38032-201ENSMUST00000195052 1589 ntBASIC4.43□□□□□ -1.7
Trim3Q9R1R2 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Trim3Q9R1R2 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Trim3Q9R1R2 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Trim3Q9R1R2 Gm28441-201ENSMUST00000190927 1343 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Trim3Q9R1R2 Gm37899-201ENSMUST00000193116 8717 ntBASIC4.43□□□□□ -1.7
Trim3Q9R1R2 Gm5925-201ENSMUST00000105016 1497 ntBASIC4.43□□□□□ -1.7
Trim3Q9R1R2 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Trim3Q9R1R2 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Trim3Q9R1R2 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
Trim3Q9R1R2 Gm42645-201ENSMUST00000201573 1627 ntBASIC4.43□□□□□ -1.7
Trim3Q9R1R2 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Trim3Q9R1R2 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Trim3Q9R1R2 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Trim3Q9R1R2 Gm15128-202ENSMUST00000178833 1350 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Trim3Q9R1R2 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Trim3Q9R1R2 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Trim3Q9R1R2 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
Trim3Q9R1R2 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Trim3Q9R1R2 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC4.42□□□□□ -1.7
Trim3Q9R1R2 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
Trim3Q9R1R2 Gm23193-201ENSMUST00000102427 82 ntBASIC4.42□□□□□ -1.7
Trim3Q9R1R2 Gm22020-201ENSMUST00000104358 136 ntBASIC4.42□□□□□ -1.7
Trim3Q9R1R2 Gm6893-201ENSMUST00000118385 522 ntBASIC4.42□□□□□ -1.7
Trim3Q9R1R2 Gm13867-201ENSMUST00000120844 395 ntBASIC4.42□□□□□ -1.7
Trim3Q9R1R2 Gm14229-201ENSMUST00000121178 850 ntBASIC4.42□□□□□ -1.7
Trim3Q9R1R2 Gm11909-201ENSMUST00000121424 759 ntBASIC4.42□□□□□ -1.7
Trim3Q9R1R2 Gm24628-201ENSMUST00000122761 289 ntBASIC4.42□□□□□ -1.7
Trim3Q9R1R2 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Trim3Q9R1R2 A730046J19Rik-201ENSMUST00000135687 4707 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Trim3Q9R1R2 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC4.42□□□□□ -1.7
Trim3Q9R1R2 Gm26373-201ENSMUST00000157833 103 ntBASIC4.42□□□□□ -1.7
Trim3Q9R1R2 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC4.42□□□□□ -1.7
Trim3Q9R1R2 Gm23799-201ENSMUST00000175559 120 ntBASIC4.42□□□□□ -1.7
Trim3Q9R1R2 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC4.42□□□□□ -1.7
Trim3Q9R1R2 Gm19427-201ENSMUST00000183619 208 ntBASIC4.42□□□□□ -1.7
Trim3Q9R1R2 Gm29011-201ENSMUST00000191059 712 ntBASIC4.42□□□□□ -1.7
Trim3Q9R1R2 Gm37243-201ENSMUST00000193407 595 ntBASIC4.42□□□□□ -1.7
Trim3Q9R1R2 Gm43843-201ENSMUST00000202396 1587 ntBASIC4.42□□□□□ -1.7
Trim3Q9R1R2 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC4.42□□□□□ -1.7
Trim3Q9R1R2 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC4.42□□□□□ -1.7
Trim3Q9R1R2 Gm7439-201ENSMUST00000214053 835 ntBASIC4.42□□□□□ -1.7
Trim3Q9R1R2 Olfr1484-203ENSMUST00000215567 3699 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Trim3Q9R1R2 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC4.42□□□□□ -1.7
Trim3Q9R1R2 Gm18363-201ENSMUST00000221671 730 ntBASIC4.42□□□□□ -1.7
Trim3Q9R1R2 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Trim3Q9R1R2 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Trim3Q9R1R2 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Trim3Q9R1R2 AC190403.1-201ENSMUST00000224515 1325 ntBASIC4.42□□□□□ -1.7
Trim3Q9R1R2 AC120153.1-201ENSMUST00000226502 1311 ntBASIC4.42□□□□□ -1.7
Trim3Q9R1R2 Olfr556-202ENSMUST00000213485 3825 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Trim3Q9R1R2 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC4.42□□□□□ -1.7
Trim3Q9R1R2 Gm43882-201ENSMUST00000204871 2264 ntBASIC4.42□□□□□ -1.7
Trim3Q9R1R2 Gm42615-201ENSMUST00000197704 1820 ntBASIC4.42□□□□□ -1.7
Trim3Q9R1R2 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms