Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Trim39Q9ESN2 AC141476.1-201ENSMUST00000224988 3387 ntBASIC5.94□□□□□ -1.46
Trim39Q9ESN2 Gm43611-201ENSMUST00000196656 4352 ntBASIC5.94□□□□□ -1.46
Trim39Q9ESN2 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Trim39Q9ESN2 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Trim39Q9ESN2 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Trim39Q9ESN2 Gm43627-201ENSMUST00000197119 2299 ntBASIC5.94□□□□□ -1.46
Trim39Q9ESN2 Gm25344-201ENSMUST00000104503 132 ntBASIC5.94□□□□□ -1.46
Trim39Q9ESN2 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC5.94□□□□□ -1.46
Trim39Q9ESN2 Gm14870-201ENSMUST00000118414 156 ntBASIC5.94□□□□□ -1.46
Trim39Q9ESN2 Gm6987-201ENSMUST00000119319 428 ntBASIC5.94□□□□□ -1.46
Trim39Q9ESN2 Gm13444-201ENSMUST00000119445 522 ntBASIC5.94□□□□□ -1.46
Trim39Q9ESN2 Gm14815-201ENSMUST00000120060 488 ntBASIC5.94□□□□□ -1.46
Trim39Q9ESN2 Gm13259-201ENSMUST00000120792 456 ntBASIC5.94□□□□□ -1.46
Trim39Q9ESN2 Gm5166-201ENSMUST00000121332 573 ntBASIC5.94□□□□□ -1.46
Trim39Q9ESN2 Gm2986-201ENSMUST00000121603 382 ntBASIC5.94□□□□□ -1.46
Trim39Q9ESN2 Gm12778-201ENSMUST00000122341 333 ntBASIC5.94□□□□□ -1.46
Trim39Q9ESN2 Gm26023-201ENSMUST00000122722 313 ntBASIC5.94□□□□□ -1.46
Trim39Q9ESN2 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Trim39Q9ESN2 Gm10130-201ENSMUST00000133235 303 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Trim39Q9ESN2 Cav1-209ENSMUST00000150901 380 ntTSL 2 BASIC5.94□□□□□ -1.46
Trim39Q9ESN2 Gm25281-201ENSMUST00000157270 104 ntBASIC5.94□□□□□ -1.46
Trim39Q9ESN2 Gm26486-201ENSMUST00000158021 110 ntBASIC5.94□□□□□ -1.46
Trim39Q9ESN2 Gm24103-201ENSMUST00000174930 77 ntBASIC5.94□□□□□ -1.46
Trim39Q9ESN2 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Trim39Q9ESN2 Gm21978-201ENSMUST00000179696 377 ntBASIC5.94□□□□□ -1.46
Trim39Q9ESN2 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC5.94□□□□□ -1.46
Trim39Q9ESN2 Gm28390-201ENSMUST00000185212 700 ntBASIC5.94□□□□□ -1.46
Trim39Q9ESN2 Gm29201-201ENSMUST00000189120 431 ntBASIC5.94□□□□□ -1.46
Trim39Q9ESN2 Npn2-202ENSMUST00000189275 235 ntBASIC5.94□□□□□ -1.46
Trim39Q9ESN2 Gm32983-201ENSMUST00000208500 505 ntBASIC5.94□□□□□ -1.46
Trim39Q9ESN2 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Trim39Q9ESN2 Gm40685-201ENSMUST00000217861 580 ntTSL 3 BASIC5.94□□□□□ -1.46
Trim39Q9ESN2 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Trim39Q9ESN2 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC5.94□□□□□ -1.46
Trim39Q9ESN2 Gm5457-201ENSMUST00000022260 333 ntBASIC5.94□□□□□ -1.46
Trim39Q9ESN2 AC117769.2-201ENSMUST00000224612 469 ntBASIC5.94□□□□□ -1.46
Trim39Q9ESN2 CT025689.4-201ENSMUST00000225926 601 ntBASIC5.94□□□□□ -1.46
Trim39Q9ESN2 Gm25699-201ENSMUST00000082896 167 ntBASIC5.94□□□□□ -1.46
Trim39Q9ESN2 Gm24764-201ENSMUST00000083686 199 ntBASIC5.94□□□□□ -1.46
Trim39Q9ESN2 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Trim39Q9ESN2 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
Trim39Q9ESN2 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Trim39Q9ESN2 Gm37755-201ENSMUST00000195880 2179 ntBASIC5.94□□□□□ -1.46
Trim39Q9ESN2 Gm45297-201ENSMUST00000209893 3483 ntBASIC5.94□□□□□ -1.46
Trim39Q9ESN2 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Trim39Q9ESN2 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Trim39Q9ESN2 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Trim39Q9ESN2 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Trim39Q9ESN2 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC5.94□□□□□ -1.46
Trim39Q9ESN2 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Trim39Q9ESN2 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Trim39Q9ESN2 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Trim39Q9ESN2 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Trim39Q9ESN2 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Trim39Q9ESN2 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
Trim39Q9ESN2 Gm42892-201ENSMUST00000196227 3973 ntBASIC5.93□□□□□ -1.46
Trim39Q9ESN2 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC5.93□□□□□ -1.46
Trim39Q9ESN2 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Trim39Q9ESN2 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC5.93□□□□□ -1.46
Trim39Q9ESN2 Mir711-201ENSMUST00000102188 82 ntBASIC5.93□□□□□ -1.46
Trim39Q9ESN2 Mir208b-201ENSMUST00000104735 77 ntBASIC5.93□□□□□ -1.46
Trim39Q9ESN2 Gm25316-201ENSMUST00000116826 118 ntBASIC5.93□□□□□ -1.46
Trim39Q9ESN2 Gm15364-201ENSMUST00000119618 585 ntBASIC5.93□□□□□ -1.46
Trim39Q9ESN2 Gm11862-201ENSMUST00000119678 659 ntBASIC5.93□□□□□ -1.46
Trim39Q9ESN2 Gm12543-201ENSMUST00000120410 543 ntBASIC5.93□□□□□ -1.46
Trim39Q9ESN2 Gm14821-201ENSMUST00000121975 435 ntBASIC5.93□□□□□ -1.46
Trim39Q9ESN2 Gm14364-201ENSMUST00000129209 267 ntBASIC5.93□□□□□ -1.46
Trim39Q9ESN2 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC5.93□□□□□ -1.46
Trim39Q9ESN2 Gm25334-201ENSMUST00000158036 110 ntBASIC5.93□□□□□ -1.46
Trim39Q9ESN2 Gm16038-201ENSMUST00000159317 193 ntBASIC5.93□□□□□ -1.46
Trim39Q9ESN2 Gm17081-201ENSMUST00000167363 478 ntBASIC5.93□□□□□ -1.46
Trim39Q9ESN2 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Trim39Q9ESN2 Gm20767-201ENSMUST00000179071 510 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Trim39Q9ESN2 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Trim39Q9ESN2 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC5.93□□□□□ -1.46
Trim39Q9ESN2 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Trim39Q9ESN2 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Trim39Q9ESN2 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Trim39Q9ESN2 Gm28620-201ENSMUST00000190463 439 ntBASIC5.93□□□□□ -1.46
Trim39Q9ESN2 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC5.93□□□□□ -1.46
Trim39Q9ESN2 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Trim39Q9ESN2 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Trim39Q9ESN2 Gm44896-201ENSMUST00000206190 772 ntBASIC5.93□□□□□ -1.46
Trim39Q9ESN2 Gm44580-201ENSMUST00000206333 877 ntBASIC5.93□□□□□ -1.46
Trim39Q9ESN2 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Trim39Q9ESN2 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC5.93□□□□□ -1.46
Trim39Q9ESN2 AC134468.2-201ENSMUST00000222549 672 ntBASIC5.93□□□□□ -1.46
Trim39Q9ESN2 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Trim39Q9ESN2 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC5.93□□□□□ -1.46
Trim39Q9ESN2 CT010506.2-201ENSMUST00000225618 183 ntBASIC5.93□□□□□ -1.46
Trim39Q9ESN2 AC154592.1-201ENSMUST00000225784 574 ntBASIC5.93□□□□□ -1.46
Trim39Q9ESN2 AC139758.1-201ENSMUST00000226573 930 ntBASIC5.93□□□□□ -1.46
Trim39Q9ESN2 Olfr690-201ENSMUST00000061920 1062 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Trim39Q9ESN2 Gm26206-201ENSMUST00000082908 110 ntBASIC5.93□□□□□ -1.46
Trim39Q9ESN2 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Trim39Q9ESN2 Olfr1024-201ENSMUST00000099912 984 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Trim39Q9ESN2 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Trim39Q9ESN2 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC5.93□□□□□ -1.46
Trim39Q9ESN2 Gm43637-201ENSMUST00000202206 2926 ntBASIC5.93□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms