Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm44330-201ENSMUST00000200106 143 ntBASIC4.39□□□□□ -1.71
Lima1Q9ERG0 Gm4714-201ENSMUST00000203395 279 ntBASIC4.39□□□□□ -1.71
Lima1Q9ERG0 AC098742.1-201ENSMUST00000227945 373 ntBASIC4.39□□□□□ -1.71
Lima1Q9ERG0 Gtpbp8-201ENSMUST00000023348 836 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Lima1Q9ERG0 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Lima1Q9ERG0 Ang5-201ENSMUST00000066719 700 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Lima1Q9ERG0 Olfr547-201ENSMUST00000098229 936 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Lima1Q9ERG0 Olfr1162-201ENSMUST00000099837 945 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Lima1Q9ERG0 Gm6043-201ENSMUST00000099961 492 ntBASIC4.39□□□□□ -1.71
Lima1Q9ERG0 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC4.39□□□□□ -1.71
Lima1Q9ERG0 Gm36931-201ENSMUST00000192997 4801 ntBASIC4.39□□□□□ -1.71
Lima1Q9ERG0 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC4.39□□□□□ -1.71
Lima1Q9ERG0 Akr1c20-201ENSMUST00000078239 1317 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Lima1Q9ERG0 Gm42551-201ENSMUST00000197701 1573 ntBASIC4.39□□□□□ -1.71
Lima1Q9ERG0 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Lima1Q9ERG0 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Lima1Q9ERG0 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Lima1Q9ERG0 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Lima1Q9ERG0 Gm13100-201ENSMUST00000117157 1439 ntBASIC4.38□□□□□ -1.71
Lima1Q9ERG0 Olfr570-202ENSMUST00000209778 1423 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Lima1Q9ERG0 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Lima1Q9ERG0 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC4.38□□□□□ -1.71
Lima1Q9ERG0 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC4.38□□□□□ -1.71
Lima1Q9ERG0 Olfr1026-202ENSMUST00000217615 1538 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Lima1Q9ERG0 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Lima1Q9ERG0 Gm24578-201ENSMUST00000103970 129 ntBASIC4.38□□□□□ -1.71
Lima1Q9ERG0 Gm23709-201ENSMUST00000104364 130 ntBASIC4.38□□□□□ -1.71
Lima1Q9ERG0 Gm24608-201ENSMUST00000104381 136 ntBASIC4.38□□□□□ -1.71
Lima1Q9ERG0 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC4.38□□□□□ -1.71
Lima1Q9ERG0 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
Lima1Q9ERG0 Crem-219ENSMUST00000140332 1015 ntTSL 5 BASIC4.38□□□□□ -1.71
Lima1Q9ERG0 Gm22378-201ENSMUST00000157481 111 ntBASIC4.38□□□□□ -1.71
Lima1Q9ERG0 Gm24685-201ENSMUST00000157764 285 ntBASIC4.38□□□□□ -1.71
Lima1Q9ERG0 Gm25923-201ENSMUST00000158312 138 ntBASIC4.38□□□□□ -1.71
Lima1Q9ERG0 V1rd19-201ENSMUST00000173571 1157 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Lima1Q9ERG0 Gm42936-201ENSMUST00000174019 652 ntTSL 3 BASIC4.38□□□□□ -1.71
Lima1Q9ERG0 Vmn2r-ps134-201ENSMUST00000176907 1046 ntBASIC4.38□□□□□ -1.71
Lima1Q9ERG0 Gm9320-201ENSMUST00000184151 473 ntBASIC4.38□□□□□ -1.71
Lima1Q9ERG0 Gm37741-201ENSMUST00000191768 1256 ntBASIC4.38□□□□□ -1.71
Lima1Q9ERG0 Gm43309-201ENSMUST00000200837 458 ntBASIC4.38□□□□□ -1.71
Lima1Q9ERG0 A530053G22Rik-203ENSMUST00000204370 612 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Lima1Q9ERG0 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Lima1Q9ERG0 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC4.38□□□□□ -1.71
Lima1Q9ERG0 Gm18850-201ENSMUST00000211578 388 ntBASIC4.38□□□□□ -1.71
Lima1Q9ERG0 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Lima1Q9ERG0 Olfr682-ps1-202ENSMUST00000214399 897 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Lima1Q9ERG0 Supt4b-201ENSMUST00000214434 351 ntBASIC4.38□□□□□ -1.71
Lima1Q9ERG0 Gm29785-201ENSMUST00000217033 383 ntBASIC4.38□□□□□ -1.71
Lima1Q9ERG0 AC126253.2-201ENSMUST00000226518 205 ntBASIC4.38□□□□□ -1.71
Lima1Q9ERG0 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Lima1Q9ERG0 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Lima1Q9ERG0 AC120153.1-201ENSMUST00000226502 1311 ntBASIC4.38□□□□□ -1.71
Lima1Q9ERG0 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
Lima1Q9ERG0 Gm13310-201ENSMUST00000120962 1381 ntBASIC4.38□□□□□ -1.71
Lima1Q9ERG0 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Lima1Q9ERG0 Kcnrg-201ENSMUST00000051184 1766 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
Lima1Q9ERG0 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC4.37□□□□□ -1.71
Lima1Q9ERG0 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Lima1Q9ERG0 Gm43594-201ENSMUST00000201153 3442 ntBASIC4.37□□□□□ -1.71
Lima1Q9ERG0 Olfr57-202ENSMUST00000203906 1647 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Lima1Q9ERG0 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Lima1Q9ERG0 Rpl36a-201ENSMUST00000113211 483 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Lima1Q9ERG0 Gm13771-201ENSMUST00000117988 238 ntBASIC4.37□□□□□ -1.71
Lima1Q9ERG0 Gm15553-201ENSMUST00000118757 430 ntBASIC4.37□□□□□ -1.71
Lima1Q9ERG0 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC4.37□□□□□ -1.71
Lima1Q9ERG0 Gm24751-201ENSMUST00000157844 102 ntBASIC4.37□□□□□ -1.71
Lima1Q9ERG0 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Lima1Q9ERG0 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC4.37□□□□□ -1.71
Lima1Q9ERG0 Gm20614-201ENSMUST00000177106 632 ntBASIC4.37□□□□□ -1.71
Lima1Q9ERG0 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Lima1Q9ERG0 Gm43491-201ENSMUST00000197133 784 ntBASIC4.37□□□□□ -1.71
Lima1Q9ERG0 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC4.37□□□□□ -1.71
Lima1Q9ERG0 Gm45359-201ENSMUST00000210635 427 ntBASIC4.37□□□□□ -1.71
Lima1Q9ERG0 Gm2607-201ENSMUST00000212389 627 ntBASIC4.37□□□□□ -1.71
Lima1Q9ERG0 AC153961.2-201ENSMUST00000218877 164 ntBASIC4.37□□□□□ -1.71
Lima1Q9ERG0 AC132384.6-201ENSMUST00000218976 1206 ntBASIC4.37□□□□□ -1.71
Lima1Q9ERG0 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
Lima1Q9ERG0 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC4.37□□□□□ -1.71
Lima1Q9ERG0 AC211878.2-201ENSMUST00000222486 488 ntBASIC4.37□□□□□ -1.71
Lima1Q9ERG0 AC135377.1-201ENSMUST00000223692 463 ntBASIC4.37□□□□□ -1.71
Lima1Q9ERG0 AC154335.2-201ENSMUST00000225916 638 ntBASIC4.37□□□□□ -1.71
Lima1Q9ERG0 Olfr68-201ENSMUST00000072513 948 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Lima1Q9ERG0 n-R5s182-201ENSMUST00000083889 107 ntBASIC4.37□□□□□ -1.71
Lima1Q9ERG0 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Lima1Q9ERG0 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Lima1Q9ERG0 Gm35755-201ENSMUST00000222392 2077 ntBASIC4.37□□□□□ -1.71
Lima1Q9ERG0 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
Lima1Q9ERG0 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Lima1Q9ERG0 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Lima1Q9ERG0 Gm38235-201ENSMUST00000194600 4952 ntBASIC4.37□□□□□ -1.71
Lima1Q9ERG0 Zfp433-201ENSMUST00000085664 1800 ntTSL 5 BASIC4.37□□□□□ -1.71
Lima1Q9ERG0 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC4.37□□□□□ -1.71
Lima1Q9ERG0 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
Lima1Q9ERG0 Zfp667-202ENSMUST00000108562 3498 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
Lima1Q9ERG0 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Lima1Q9ERG0 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Lima1Q9ERG0 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC4.36□□□□□ -1.71
Lima1Q9ERG0 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Lima1Q9ERG0 Gm42704-201ENSMUST00000196875 1778 ntBASIC4.36□□□□□ -1.71
Lima1Q9ERG0 Gm23594-201ENSMUST00000104307 134 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms