Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC5.28□□□□□ -1.56
Smc1aQ9CU62 Gm22519-201ENSMUST00000158270 178 ntBASIC5.28□□□□□ -1.56
Smc1aQ9CU62 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC5.28□□□□□ -1.56
Smc1aQ9CU62 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Smc1aQ9CU62 1700054K19Rik-201ENSMUST00000186102 452 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Smc1aQ9CU62 Hmgn3-205ENSMUST00000187193 855 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Smc1aQ9CU62 4930598F16Rik-201ENSMUST00000187352 761 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Smc1aQ9CU62 Gm29556-201ENSMUST00000187591 696 ntBASIC5.28□□□□□ -1.56
Smc1aQ9CU62 Gm38150-201ENSMUST00000192996 452 ntBASIC5.28□□□□□ -1.56
Smc1aQ9CU62 Gm9442-201ENSMUST00000194242 319 ntBASIC5.28□□□□□ -1.56
Smc1aQ9CU62 Gm18382-201ENSMUST00000194394 582 ntBASIC5.28□□□□□ -1.56
Smc1aQ9CU62 AL645522.1-201ENSMUST00000197692 104 ntBASIC5.28□□□□□ -1.56
Smc1aQ9CU62 Gm42990-201ENSMUST00000199231 312 ntBASIC5.28□□□□□ -1.56
Smc1aQ9CU62 Gm6051-201ENSMUST00000201529 352 ntBASIC5.28□□□□□ -1.56
Smc1aQ9CU62 Gm5995-201ENSMUST00000204107 1273 ntBASIC5.28□□□□□ -1.56
Smc1aQ9CU62 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Smc1aQ9CU62 Gm45228-201ENSMUST00000206585 352 ntBASIC5.28□□□□□ -1.56
Smc1aQ9CU62 Gm19201-201ENSMUST00000210127 778 ntBASIC5.28□□□□□ -1.56
Smc1aQ9CU62 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Smc1aQ9CU62 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC5.28□□□□□ -1.56
Smc1aQ9CU62 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Smc1aQ9CU62 Nsa2-203ENSMUST00000225410 974 ntBASIC5.28□□□□□ -1.56
Smc1aQ9CU62 AC133910.1-201ENSMUST00000228128 624 ntBASIC5.28□□□□□ -1.56
Smc1aQ9CU62 Olfr904-201ENSMUST00000058153 933 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Smc1aQ9CU62 Gm10916-201ENSMUST00000080330 483 ntBASIC5.28□□□□□ -1.56
Smc1aQ9CU62 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Smc1aQ9CU62 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Smc1aQ9CU62 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Smc1aQ9CU62 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Smc1aQ9CU62 Gpr21-201ENSMUST00000065441 3619 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Smc1aQ9CU62 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Smc1aQ9CU62 Olfr1000-202ENSMUST00000213837 1915 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
Smc1aQ9CU62 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC5.28□□□□□ -1.56
Smc1aQ9CU62 Gm36963-201ENSMUST00000193506 2324 ntBASIC5.28□□□□□ -1.56
Smc1aQ9CU62 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
Smc1aQ9CU62 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC5.27□□□□□ -1.57
Smc1aQ9CU62 AC190403.1-201ENSMUST00000224515 1325 ntBASIC5.27□□□□□ -1.57
Smc1aQ9CU62 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Smc1aQ9CU62 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Smc1aQ9CU62 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Smc1aQ9CU62 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Smc1aQ9CU62 Gm24125-201ENSMUST00000104105 137 ntBASIC5.27□□□□□ -1.57
Smc1aQ9CU62 Gm23608-201ENSMUST00000104545 128 ntBASIC5.27□□□□□ -1.57
Smc1aQ9CU62 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Smc1aQ9CU62 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Smc1aQ9CU62 Gm12285-201ENSMUST00000117347 233 ntBASIC5.27□□□□□ -1.57
Smc1aQ9CU62 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC5.27□□□□□ -1.57
Smc1aQ9CU62 Gm16463-201ENSMUST00000120527 721 ntBASIC5.27□□□□□ -1.57
Smc1aQ9CU62 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Smc1aQ9CU62 Gm4852-201ENSMUST00000121202 729 ntBASIC5.27□□□□□ -1.57
Smc1aQ9CU62 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
Smc1aQ9CU62 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC5.27□□□□□ -1.57
Smc1aQ9CU62 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
Smc1aQ9CU62 Gm16589-201ENSMUST00000159522 918 ntBASIC5.27□□□□□ -1.57
Smc1aQ9CU62 Gm17421-201ENSMUST00000167845 674 ntBASIC5.27□□□□□ -1.57
Smc1aQ9CU62 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Smc1aQ9CU62 Vmn1r-ps52-201ENSMUST00000177426 862 ntBASIC5.27□□□□□ -1.57
Smc1aQ9CU62 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC5.27□□□□□ -1.57
Smc1aQ9CU62 4933433F19Rik-201ENSMUST00000180571 1088 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Smc1aQ9CU62 Mir1957b-201ENSMUST00000184608 123 ntBASIC5.27□□□□□ -1.57
Smc1aQ9CU62 Gm29086-201ENSMUST00000186774 222 ntBASIC5.27□□□□□ -1.57
Smc1aQ9CU62 Gm29085-201ENSMUST00000187108 225 ntBASIC5.27□□□□□ -1.57
Smc1aQ9CU62 1700121L03Rik-201ENSMUST00000187796 704 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Smc1aQ9CU62 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC5.27□□□□□ -1.57
Smc1aQ9CU62 Gm37934-201ENSMUST00000192902 402 ntBASIC5.27□□□□□ -1.57
Smc1aQ9CU62 Gm37223-202ENSMUST00000193592 490 ntTSL 3 BASIC5.27□□□□□ -1.57
Smc1aQ9CU62 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC5.27□□□□□ -1.57
Smc1aQ9CU62 Gm44403-201ENSMUST00000198554 129 ntBASIC5.27□□□□□ -1.57
Smc1aQ9CU62 Gm43825-201ENSMUST00000199650 734 ntBASIC5.27□□□□□ -1.57
Smc1aQ9CU62 AC122464.1-201ENSMUST00000202789 770 ntBASIC5.27□□□□□ -1.57
Smc1aQ9CU62 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC5.27□□□□□ -1.57
Smc1aQ9CU62 Olfr852-ps1-201ENSMUST00000212273 226 ntBASIC5.27□□□□□ -1.57
Smc1aQ9CU62 AC137127.3-201ENSMUST00000213340 349 ntBASIC5.27□□□□□ -1.57
Smc1aQ9CU62 AC159622.1-201ENSMUST00000221004 554 ntBASIC5.27□□□□□ -1.57
Smc1aQ9CU62 AC173345.3-201ENSMUST00000221245 1093 ntBASIC5.27□□□□□ -1.57
Smc1aQ9CU62 AC159252.1-201ENSMUST00000224450 553 ntBASIC5.27□□□□□ -1.57
Smc1aQ9CU62 Gm5045-201ENSMUST00000027054 810 ntBASIC5.27□□□□□ -1.57
Smc1aQ9CU62 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Smc1aQ9CU62 Gm7117-201ENSMUST00000071515 387 ntBASIC5.27□□□□□ -1.57
Smc1aQ9CU62 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC5.27□□□□□ -1.57
Smc1aQ9CU62 Gm23407-201ENSMUST00000082538 91 ntBASIC5.27□□□□□ -1.57
Smc1aQ9CU62 Gm5458-201ENSMUST00000096121 997 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
Smc1aQ9CU62 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Smc1aQ9CU62 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Smc1aQ9CU62 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Smc1aQ9CU62 Gm45885-202ENSMUST00000211520 1383 ntBASIC5.27□□□□□ -1.57
Smc1aQ9CU62 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Smc1aQ9CU62 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC5.27□□□□□ -1.57
Smc1aQ9CU62 Fcrl5-203ENSMUST00000178261 1791 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Smc1aQ9CU62 Fcrl5-201ENSMUST00000049926 1791 ntAPPRIS P4 TSL 5 BASIC5.27□□□□□ -1.57
Smc1aQ9CU62 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Smc1aQ9CU62 Gm43312-201ENSMUST00000201655 2466 ntBASIC5.26□□□□□ -1.57
Smc1aQ9CU62 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Smc1aQ9CU62 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
Smc1aQ9CU62 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC5.26□□□□□ -1.57
Smc1aQ9CU62 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Smc1aQ9CU62 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
Smc1aQ9CU62 Gm14385-201ENSMUST00000116315 876 ntBASIC5.26□□□□□ -1.57
Smc1aQ9CU62 Gm15779-201ENSMUST00000117470 412 ntBASIC5.26□□□□□ -1.57
Smc1aQ9CU62 Defa-ps14-201ENSMUST00000121373 418 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms