Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm27887-201ENSMUST00000184367 102 ntBASIC6.43□□□□□ -1.38
Clp1Q99LI9 Gm27679-201ENSMUST00000184612 84 ntBASIC6.43□□□□□ -1.38
Clp1Q99LI9 1700128A07Rik-201ENSMUST00000186311 860 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Clp1Q99LI9 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Clp1Q99LI9 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC6.43□□□□□ -1.38
Clp1Q99LI9 Gm42961-201ENSMUST00000202023 181 ntBASIC6.43□□□□□ -1.38
Clp1Q99LI9 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Clp1Q99LI9 Gm45081-201ENSMUST00000206281 572 ntBASIC6.43□□□□□ -1.38
Clp1Q99LI9 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC6.43□□□□□ -1.38
Clp1Q99LI9 Gm45196-201ENSMUST00000206751 825 ntBASIC6.43□□□□□ -1.38
Clp1Q99LI9 Gm45596-201ENSMUST00000209279 434 ntBASIC6.43□□□□□ -1.38
Clp1Q99LI9 Gm45439-201ENSMUST00000211723 359 ntBASIC6.43□□□□□ -1.38
Clp1Q99LI9 Gm31931-201ENSMUST00000219666 222 ntBASIC6.43□□□□□ -1.38
Clp1Q99LI9 AC156802.1-201ENSMUST00000223623 579 ntBASIC6.43□□□□□ -1.38
Clp1Q99LI9 AC192333.2-201ENSMUST00000224771 196 ntBASIC6.43□□□□□ -1.38
Clp1Q99LI9 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC6.43□□□□□ -1.38
Clp1Q99LI9 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Clp1Q99LI9 Gm5229-201ENSMUST00000039375 354 ntBASIC6.43□□□□□ -1.38
Clp1Q99LI9 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Clp1Q99LI9 n-R5s215-201ENSMUST00000082480 104 ntBASIC6.43□□□□□ -1.38
Clp1Q99LI9 Ube2v2-201ENSMUST00000096234 609 ntTSL 3 BASIC6.43□□□□□ -1.38
Clp1Q99LI9 Gm16261-201ENSMUST00000096813 205 ntBASIC6.43□□□□□ -1.38
Clp1Q99LI9 Gm5084-202ENSMUST00000224064 3609 ntBASIC6.43□□□□□ -1.38
Clp1Q99LI9 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Clp1Q99LI9 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Clp1Q99LI9 Gm44677-201ENSMUST00000209151 3739 ntBASIC6.43□□□□□ -1.38
Clp1Q99LI9 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Clp1Q99LI9 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Clp1Q99LI9 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Clp1Q99LI9 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Clp1Q99LI9 Gm16751-201ENSMUST00000142212 1685 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Clp1Q99LI9 AW046200-203ENSMUST00000211787 2479 ntBASIC6.42□□□□□ -1.38
Clp1Q99LI9 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Clp1Q99LI9 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Clp1Q99LI9 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Clp1Q99LI9 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Clp1Q99LI9 Gm22032-201ENSMUST00000116946 116 ntBASIC6.42□□□□□ -1.38
Clp1Q99LI9 Gm6744-201ENSMUST00000119303 543 ntBASIC6.42□□□□□ -1.38
Clp1Q99LI9 Gm11606-201ENSMUST00000120706 617 ntBASIC6.42□□□□□ -1.38
Clp1Q99LI9 Gm13677-201ENSMUST00000120739 595 ntBASIC6.42□□□□□ -1.38
Clp1Q99LI9 Gm15166-201ENSMUST00000120790 385 ntBASIC6.42□□□□□ -1.38
Clp1Q99LI9 Gm22235-201ENSMUST00000157085 110 ntBASIC6.42□□□□□ -1.38
Clp1Q99LI9 Gm22765-201ENSMUST00000158371 128 ntBASIC6.42□□□□□ -1.38
Clp1Q99LI9 Gm25489-201ENSMUST00000158727 141 ntBASIC6.42□□□□□ -1.38
Clp1Q99LI9 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Clp1Q99LI9 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC6.42□□□□□ -1.38
Clp1Q99LI9 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC6.42□□□□□ -1.38
Clp1Q99LI9 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC6.42□□□□□ -1.38
Clp1Q99LI9 Gm29111-201ENSMUST00000188823 696 ntBASIC6.42□□□□□ -1.38
Clp1Q99LI9 Gm18444-201ENSMUST00000191239 629 ntBASIC6.42□□□□□ -1.38
Clp1Q99LI9 Gm28584-201ENSMUST00000191489 696 ntBASIC6.42□□□□□ -1.38
Clp1Q99LI9 Gm38138-201ENSMUST00000193274 696 ntBASIC6.42□□□□□ -1.38
Clp1Q99LI9 Gm37272-201ENSMUST00000193401 488 ntBASIC6.42□□□□□ -1.38
Clp1Q99LI9 Gm37308-201ENSMUST00000194684 100 ntBASIC6.42□□□□□ -1.38
Clp1Q99LI9 Gm43744-201ENSMUST00000196387 688 ntBASIC6.42□□□□□ -1.38
Clp1Q99LI9 Gm44494-201ENSMUST00000196760 129 ntBASIC6.42□□□□□ -1.38
Clp1Q99LI9 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC6.42□□□□□ -1.38
Clp1Q99LI9 Gm42850-201ENSMUST00000202094 201 ntBASIC6.42□□□□□ -1.38
Clp1Q99LI9 Gm7832-201ENSMUST00000202613 880 ntBASIC6.42□□□□□ -1.38
Clp1Q99LI9 Gm44125-201ENSMUST00000203068 448 ntBASIC6.42□□□□□ -1.38
Clp1Q99LI9 Gm7838-201ENSMUST00000203221 1189 ntBASIC6.42□□□□□ -1.38
Clp1Q99LI9 Gm44818-201ENSMUST00000206608 358 ntBASIC6.42□□□□□ -1.38
Clp1Q99LI9 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC6.42□□□□□ -1.38
Clp1Q99LI9 Gm33601-201ENSMUST00000210001 961 ntBASIC6.42□□□□□ -1.38
Clp1Q99LI9 Gm8423-201ENSMUST00000211387 607 ntBASIC6.42□□□□□ -1.38
Clp1Q99LI9 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC6.42□□□□□ -1.38
Clp1Q99LI9 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC6.42□□□□□ -1.38
Clp1Q99LI9 AC132384.3-201ENSMUST00000219709 472 ntBASIC6.42□□□□□ -1.38
Clp1Q99LI9 Gm6068-201ENSMUST00000222270 387 ntBASIC6.42□□□□□ -1.38
Clp1Q99LI9 Ear14-201ENSMUST00000049559 468 ntBASIC6.42□□□□□ -1.38
Clp1Q99LI9 Gm25682-201ENSMUST00000083942 164 ntBASIC6.42□□□□□ -1.38
Clp1Q99LI9 Gm26111-201ENSMUST00000083969 106 ntBASIC6.42□□□□□ -1.38
Clp1Q99LI9 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Clp1Q99LI9 Gm21292-201ENSMUST00000171947 1563 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Clp1Q99LI9 AC161884.1-201ENSMUST00000225436 2174 ntBASIC6.42□□□□□ -1.38
Clp1Q99LI9 AC122263.1-201ENSMUST00000228636 2805 ntBASIC6.42□□□□□ -1.38
Clp1Q99LI9 Fam35a-206ENSMUST00000228626 3100 ntBASIC6.42□□□□□ -1.38
Clp1Q99LI9 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Clp1Q99LI9 Gm44587-201ENSMUST00000207399 1685 ntBASIC6.42□□□□□ -1.38
Clp1Q99LI9 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
Clp1Q99LI9 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Clp1Q99LI9 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Clp1Q99LI9 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Clp1Q99LI9 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Clp1Q99LI9 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Clp1Q99LI9 Olfr62-203ENSMUST00000217013 2654 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Clp1Q99LI9 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Clp1Q99LI9 Atp2b1-201ENSMUST00000020107 7130 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Clp1Q99LI9 Gm45838-201ENSMUST00000207355 2447 ntBASIC6.41□□□□□ -1.38
Clp1Q99LI9 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Clp1Q99LI9 Lifr-207ENSMUST00000227727 2489 ntAPPRIS ALT2 BASIC6.41□□□□□ -1.38
Clp1Q99LI9 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Clp1Q99LI9 Thap6-201ENSMUST00000191860 3151 ntBASIC6.41□□□□□ -1.38
Clp1Q99LI9 Olfr1500-205ENSMUST00000216287 2178 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Clp1Q99LI9 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC6.41□□□□□ -1.38
Clp1Q99LI9 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Clp1Q99LI9 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Clp1Q99LI9 Gm8750-201ENSMUST00000173278 1537 ntBASIC6.41□□□□□ -1.38
Clp1Q99LI9 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Clp1Q99LI9 Vmn1r51-201ENSMUST00000072859 2567 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 101.8 ms