Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Lsm1Q8VC85 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Lsm1Q8VC85 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Lsm1Q8VC85 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC4.39□□□□□ -1.71
Lsm1Q8VC85 Gm23424-201ENSMUST00000103889 110 ntBASIC4.39□□□□□ -1.71
Lsm1Q8VC85 Gm15926-201ENSMUST00000120492 550 ntBASIC4.39□□□□□ -1.71
Lsm1Q8VC85 Gm25179-201ENSMUST00000122632 128 ntBASIC4.39□□□□□ -1.71
Lsm1Q8VC85 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC4.39□□□□□ -1.71
Lsm1Q8VC85 Gm12735-201ENSMUST00000146218 651 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Lsm1Q8VC85 Gm24751-201ENSMUST00000157844 102 ntBASIC4.39□□□□□ -1.71
Lsm1Q8VC85 Gm25923-201ENSMUST00000158312 138 ntBASIC4.39□□□□□ -1.71
Lsm1Q8VC85 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Lsm1Q8VC85 Gm8214-201ENSMUST00000172123 351 ntBASIC4.39□□□□□ -1.71
Lsm1Q8VC85 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC4.39□□□□□ -1.71
Lsm1Q8VC85 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Lsm1Q8VC85 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC4.39□□□□□ -1.71
Lsm1Q8VC85 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC4.39□□□□□ -1.71
Lsm1Q8VC85 Gm43350-201ENSMUST00000196382 711 ntBASIC4.39□□□□□ -1.71
Lsm1Q8VC85 Gm44006-201ENSMUST00000204273 396 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Lsm1Q8VC85 Gm18258-201ENSMUST00000210413 542 ntBASIC4.39□□□□□ -1.71
Lsm1Q8VC85 AC118733.1-201ENSMUST00000217387 1217 ntBASIC4.39□□□□□ -1.71
Lsm1Q8VC85 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC4.39□□□□□ -1.71
Lsm1Q8VC85 AC159263.3-201ENSMUST00000223434 460 ntBASIC4.39□□□□□ -1.71
Lsm1Q8VC85 AC154576.1-201ENSMUST00000225864 563 ntBASIC4.39□□□□□ -1.71
Lsm1Q8VC85 Serpinb9d-201ENSMUST00000067198 1250 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Lsm1Q8VC85 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Lsm1Q8VC85 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Lsm1Q8VC85 Gm7988-201ENSMUST00000196623 2297 ntBASIC4.39□□□□□ -1.71
Lsm1Q8VC85 Hbp1-204ENSMUST00000175686 1315 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Lsm1Q8VC85 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
Lsm1Q8VC85 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC4.39□□□□□ -1.71
Lsm1Q8VC85 Gm45093-201ENSMUST00000206859 2463 ntBASIC4.38□□□□□ -1.71
Lsm1Q8VC85 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Lsm1Q8VC85 Gm42537-201ENSMUST00000198260 2574 ntBASIC4.38□□□□□ -1.71
Lsm1Q8VC85 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Lsm1Q8VC85 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Lsm1Q8VC85 Gm43781-201ENSMUST00000197634 2681 ntBASIC4.38□□□□□ -1.71
Lsm1Q8VC85 4930503E14Rik-201ENSMUST00000100688 1287 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Lsm1Q8VC85 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC4.38□□□□□ -1.71
Lsm1Q8VC85 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Lsm1Q8VC85 Gm14175-201ENSMUST00000119835 241 ntBASIC4.38□□□□□ -1.71
Lsm1Q8VC85 Gm14500-201ENSMUST00000121647 113 ntBASIC4.38□□□□□ -1.71
Lsm1Q8VC85 Rpl26-ps5-201ENSMUST00000122220 439 ntBASIC4.38□□□□□ -1.71
Lsm1Q8VC85 Crem-219ENSMUST00000140332 1015 ntTSL 5 BASIC4.38□□□□□ -1.71
Lsm1Q8VC85 Gm23781-201ENSMUST00000157940 308 ntBASIC4.38□□□□□ -1.71
Lsm1Q8VC85 Glipr1-204ENSMUST00000162508 1183 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Lsm1Q8VC85 Gm3531-201ENSMUST00000162698 489 ntBASIC4.38□□□□□ -1.71
Lsm1Q8VC85 Olfr723-201ENSMUST00000164157 1006 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Lsm1Q8VC85 Mir3110-201ENSMUST00000175053 80 ntBASIC4.38□□□□□ -1.71
Lsm1Q8VC85 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC4.38□□□□□ -1.71
Lsm1Q8VC85 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC4.38□□□□□ -1.71
Lsm1Q8VC85 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC4.38□□□□□ -1.71
Lsm1Q8VC85 Gm27457-201ENSMUST00000184771 156 ntBASIC4.38□□□□□ -1.71
Lsm1Q8VC85 Gm28094-201ENSMUST00000185262 390 ntBASIC4.38□□□□□ -1.71
Lsm1Q8VC85 1700128A07Rik-201ENSMUST00000186311 860 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Lsm1Q8VC85 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Lsm1Q8VC85 Gm8282-201ENSMUST00000187559 483 ntBASIC4.38□□□□□ -1.71
Lsm1Q8VC85 Gm28061-201ENSMUST00000189085 807 ntBASIC4.38□□□□□ -1.71
Lsm1Q8VC85 Gm29538-201ENSMUST00000190783 471 ntTSL 2 BASIC4.38□□□□□ -1.71
Lsm1Q8VC85 Cycs-ps2-201ENSMUST00000197114 292 ntBASIC4.38□□□□□ -1.71
Lsm1Q8VC85 Gm44054-201ENSMUST00000203814 372 ntBASIC4.38□□□□□ -1.71
Lsm1Q8VC85 Olfr723-202ENSMUST00000206058 1078 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
Lsm1Q8VC85 Gm44845-201ENSMUST00000208773 335 ntBASIC4.38□□□□□ -1.71
Lsm1Q8VC85 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC4.38□□□□□ -1.71
Lsm1Q8VC85 Gm17779-201ENSMUST00000213395 394 ntBASIC4.38□□□□□ -1.71
Lsm1Q8VC85 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Lsm1Q8VC85 AC127581.1-201ENSMUST00000214084 771 ntTSL 5 BASIC4.38□□□□□ -1.71
Lsm1Q8VC85 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC4.38□□□□□ -1.71
Lsm1Q8VC85 CT030030.1-201ENSMUST00000218809 152 ntBASIC4.38□□□□□ -1.71
Lsm1Q8VC85 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC4.38□□□□□ -1.71
Lsm1Q8VC85 Gm19073-201ENSMUST00000219978 555 ntBASIC4.38□□□□□ -1.71
Lsm1Q8VC85 Olfr724-201ENSMUST00000075030 1006 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Lsm1Q8VC85 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Lsm1Q8VC85 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Lsm1Q8VC85 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
Lsm1Q8VC85 Fus-202ENSMUST00000079045 2623 ntBASIC4.38□□□□□ -1.71
Lsm1Q8VC85 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
Lsm1Q8VC85 AC091683.1-201ENSMUST00000222307 2446 ntBASIC4.37□□□□□ -1.71
Lsm1Q8VC85 Gm38235-201ENSMUST00000194600 4952 ntBASIC4.37□□□□□ -1.71
Lsm1Q8VC85 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Lsm1Q8VC85 AC140299.2-201ENSMUST00000219546 1969 ntBASIC4.37□□□□□ -1.71
Lsm1Q8VC85 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Lsm1Q8VC85 Prl2c1-202ENSMUST00000110335 852 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
Lsm1Q8VC85 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC4.37□□□□□ -1.71
Lsm1Q8VC85 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Lsm1Q8VC85 Gm24689-201ENSMUST00000157760 104 ntBASIC4.37□□□□□ -1.71
Lsm1Q8VC85 Gm6245-201ENSMUST00000164699 768 ntBASIC4.37□□□□□ -1.71
Lsm1Q8VC85 Gm27849-201ENSMUST00000183673 125 ntBASIC4.37□□□□□ -1.71
Lsm1Q8VC85 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC4.37□□□□□ -1.71
Lsm1Q8VC85 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Lsm1Q8VC85 4930548G14Rik-202ENSMUST00000190364 1185 ntTSL 2 BASIC4.37□□□□□ -1.71
Lsm1Q8VC85 Gm43712-201ENSMUST00000198020 291 ntBASIC4.37□□□□□ -1.71
Lsm1Q8VC85 Gm19596-201ENSMUST00000203685 739 ntBASIC4.37□□□□□ -1.71
Lsm1Q8VC85 Gm44604-201ENSMUST00000205475 496 ntBASIC4.37□□□□□ -1.71
Lsm1Q8VC85 Gm18127-201ENSMUST00000208479 725 ntBASIC4.37□□□□□ -1.71
Lsm1Q8VC85 Gm45236-201ENSMUST00000208632 229 ntBASIC4.37□□□□□ -1.71
Lsm1Q8VC85 Gm45359-201ENSMUST00000210635 427 ntBASIC4.37□□□□□ -1.71
Lsm1Q8VC85 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC4.37□□□□□ -1.71
Lsm1Q8VC85 Olfr864-ps1-201ENSMUST00000212664 930 ntBASIC4.37□□□□□ -1.71
Lsm1Q8VC85 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC4.37□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms