Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Col6a6Q8C6K9 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Col6a6Q8C6K9 Gm19514-201ENSMUST00000206856 4489 ntBASIC3.92□□□□□ -1.78
Col6a6Q8C6K9 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC3.92□□□□□ -1.78
Col6a6Q8C6K9 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC3.92□□□□□ -1.78
Col6a6Q8C6K9 Ighv5-16-201ENSMUST00000103458 350 ntAPPRIS ALT2 BASIC3.92□□□□□ -1.78
Col6a6Q8C6K9 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Col6a6Q8C6K9 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC3.92□□□□□ -1.78
Col6a6Q8C6K9 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC3.92□□□□□ -1.78
Col6a6Q8C6K9 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC3.92□□□□□ -1.78
Col6a6Q8C6K9 Gm18537-201ENSMUST00000205709 989 ntBASIC3.92□□□□□ -1.78
Col6a6Q8C6K9 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC3.92□□□□□ -1.78
Col6a6Q8C6K9 Gm18320-201ENSMUST00000211304 595 ntBASIC3.92□□□□□ -1.78
Col6a6Q8C6K9 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC3.92□□□□□ -1.78
Col6a6Q8C6K9 CT030184.2-201ENSMUST00000223064 263 ntBASIC3.92□□□□□ -1.78
Col6a6Q8C6K9 Vmn1r28-203ENSMUST00000228678 909 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Col6a6Q8C6K9 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Col6a6Q8C6K9 Olfr1505-201ENSMUST00000081520 1103 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Col6a6Q8C6K9 n-R5s3-201ENSMUST00000083879 112 ntBASIC3.92□□□□□ -1.78
Col6a6Q8C6K9 Ssxb3-201ENSMUST00000089374 824 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Col6a6Q8C6K9 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Col6a6Q8C6K9 Gm37762-201ENSMUST00000194515 3561 ntBASIC3.92□□□□□ -1.78
Col6a6Q8C6K9 Fbxw26-201ENSMUST00000071917 1824 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Col6a6Q8C6K9 Gm45517-201ENSMUST00000209973 2468 ntBASIC3.91□□□□□ -1.78
Col6a6Q8C6K9 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Col6a6Q8C6K9 Gm45885-202ENSMUST00000211520 1383 ntBASIC3.91□□□□□ -1.78
Col6a6Q8C6K9 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
Col6a6Q8C6K9 Gm24281-201ENSMUST00000104234 136 ntBASIC3.91□□□□□ -1.78
Col6a6Q8C6K9 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Col6a6Q8C6K9 Gm24314-201ENSMUST00000158274 123 ntBASIC3.91□□□□□ -1.78
Col6a6Q8C6K9 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
Col6a6Q8C6K9 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Col6a6Q8C6K9 Gm38360-201ENSMUST00000195130 454 ntBASIC3.91□□□□□ -1.78
Col6a6Q8C6K9 Gm44134-201ENSMUST00000203064 661 ntTSL 2 BASIC3.91□□□□□ -1.78
Col6a6Q8C6K9 Gm18377-201ENSMUST00000215141 607 ntBASIC3.91□□□□□ -1.78
Col6a6Q8C6K9 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC3.91□□□□□ -1.78
Col6a6Q8C6K9 AC153852.1-201ENSMUST00000217881 567 ntBASIC3.91□□□□□ -1.78
Col6a6Q8C6K9 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC3.91□□□□□ -1.78
Col6a6Q8C6K9 Olfr741-201ENSMUST00000071932 936 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Col6a6Q8C6K9 Gm38125-201ENSMUST00000194136 3438 ntBASIC3.91□□□□□ -1.78
Col6a6Q8C6K9 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC3.91□□□□□ -1.78
Col6a6Q8C6K9 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Col6a6Q8C6K9 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
Col6a6Q8C6K9 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Col6a6Q8C6K9 Gm43527-201ENSMUST00000198749 3178 ntBASIC3.91□□□□□ -1.78
Col6a6Q8C6K9 Dbpht2-202ENSMUST00000221311 5341 ntBASIC3.91□□□□□ -1.78
Col6a6Q8C6K9 AC116797.2-201ENSMUST00000224763 4221 ntBASIC3.91□□□□□ -1.78
Col6a6Q8C6K9 Gm43374-201ENSMUST00000202498 2391 ntBASIC3.91□□□□□ -1.78
Col6a6Q8C6K9 CT025710.1-201ENSMUST00000222949 2533 ntBASIC3.91□□□□□ -1.78
Col6a6Q8C6K9 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC3.91□□□□□ -1.78
Col6a6Q8C6K9 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC3.91□□□□□ -1.78
Col6a6Q8C6K9 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Col6a6Q8C6K9 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Col6a6Q8C6K9 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC3.91□□□□□ -1.78
Col6a6Q8C6K9 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Col6a6Q8C6K9 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Col6a6Q8C6K9 Mir6408-201ENSMUST00000183643 91 ntBASIC3.91□□□□□ -1.78
Col6a6Q8C6K9 Gm43330-201ENSMUST00000199706 2153 ntBASIC3.91□□□□□ -1.78
Col6a6Q8C6K9 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC3.91□□□□□ -1.78
Col6a6Q8C6K9 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Col6a6Q8C6K9 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC3.91□□□□□ -1.78
Col6a6Q8C6K9 Olfr1277-201ENSMUST00000099619 962 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Col6a6Q8C6K9 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Col6a6Q8C6K9 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Col6a6Q8C6K9 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Col6a6Q8C6K9 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC3.91□□□□□ -1.78
Col6a6Q8C6K9 Gm15394-201ENSMUST00000119656 1308 ntBASIC3.9□□□□□ -1.78
Col6a6Q8C6K9 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC3.9□□□□□ -1.78
Col6a6Q8C6K9 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Col6a6Q8C6K9 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC3.9□□□□□ -1.78
Col6a6Q8C6K9 Gm2080-201ENSMUST00000211299 1573 ntBASIC3.9□□□□□ -1.78
Col6a6Q8C6K9 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Col6a6Q8C6K9 AC158633.1-201ENSMUST00000219892 649 ntBASIC3.9□□□□□ -1.79
Col6a6Q8C6K9 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Col6a6Q8C6K9 Gm37045-201ENSMUST00000192016 2463 ntBASIC3.9□□□□□ -1.79
Col6a6Q8C6K9 Zfa-ps-201ENSMUST00000180526 2231 ntBASIC3.9□□□□□ -1.79
Col6a6Q8C6K9 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Col6a6Q8C6K9 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Col6a6Q8C6K9 Kcnrg-201ENSMUST00000051184 1766 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
Col6a6Q8C6K9 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Col6a6Q8C6K9 AC124581.3-201ENSMUST00000224270 1624 ntBASIC3.9□□□□□ -1.79
Col6a6Q8C6K9 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Col6a6Q8C6K9 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Col6a6Q8C6K9 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
Col6a6Q8C6K9 Gm12103-201ENSMUST00000121892 362 ntBASIC3.9□□□□□ -1.79
Col6a6Q8C6K9 Gm12885-201ENSMUST00000122246 328 ntBASIC3.9□□□□□ -1.79
Col6a6Q8C6K9 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC3.9□□□□□ -1.79
Col6a6Q8C6K9 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC3.9□□□□□ -1.79
Col6a6Q8C6K9 Mir7062-201ENSMUST00000185038 66 ntBASIC3.9□□□□□ -1.79
Col6a6Q8C6K9 Gm38061-201ENSMUST00000192490 365 ntBASIC3.9□□□□□ -1.79
Col6a6Q8C6K9 Olfr712-ps1-201ENSMUST00000207690 950 ntBASIC3.9□□□□□ -1.79
Col6a6Q8C6K9 CU024892.1-201ENSMUST00000224869 515 ntBASIC3.9□□□□□ -1.79
Col6a6Q8C6K9 AC162183.1-202ENSMUST00000225434 904 ntBASIC3.9□□□□□ -1.79
Col6a6Q8C6K9 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Col6a6Q8C6K9 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Col6a6Q8C6K9 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC3.89□□□□□ -1.79
Col6a6Q8C6K9 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Col6a6Q8C6K9 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
Col6a6Q8C6K9 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Col6a6Q8C6K9 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms